RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 NPM3O75607 178 aaKnown RBP16.49■□□□□ 0.23
CALD1-207ENST00000430085 PRELPP51888 382 aa16.49■□□□□ 0.23
CALD1-207ENST00000430085 MAD2L2Q9UI95 211 aa16.49■□□□□ 0.23
CALD1-207ENST00000430085 PCDHA7Q9UN72 937 aa16.49■□□□□ 0.23
CALD1-207ENST00000430085 PSMD14O00487 310 aa16.48■□□□□ 0.23
CALD1-207ENST00000430085 NR1I2O75469 434 aa16.48■□□□□ 0.23
CALD1-207ENST00000430085 VIL1P09327 827 aaKnown RBP16.48■□□□□ 0.23
CALD1-207ENST00000430085 SCG2P13521 617 aa16.48■□□□□ 0.23
CALD1-207ENST00000430085 AKR1B1P15121 316 aa16.48■□□□□ 0.23
CALD1-207ENST00000430085 KRT2P35908 639 aa16.48■□□□□ 0.23
CALD1-207ENST00000430085 ADALQ6DHV7 355 aa16.48■□□□□ 0.23
CALD1-207ENST00000430085 ZFPM1Q8IX07 1006 aa16.48■□□□□ 0.23
CALD1-207ENST00000430085 OGFOD1Q8N543 542 aa16.48■□□□□ 0.23
CALD1-207ENST00000430085 LZTS2Q9BRK4 669 aa16.48■□□□□ 0.23
CALD1-207ENST00000430085 PHF20Q9BVI0 1012 aa16.48■□□□□ 0.23
CALD1-207ENST00000430085 TRIM34Q9BYJ4 488 aa16.48■□□□□ 0.23
CALD1-207ENST00000430085 RBSNQ9H1K0 784 aa16.48■□□□□ 0.23
CALD1-207ENST00000430085 TNMDQ9H2S6 317 aa16.48■□□□□ 0.23
CALD1-207ENST00000430085 TDRD3Q9H7E2 651 aaKnown RBP16.48■□□□□ 0.23
CALD1-207ENST00000430085 FAM198AQ9UFP1 575 aa16.48■□□□□ 0.23
CALD1-207ENST00000430085 ZNRF3Q9ULT6 936 aa16.48■□□□□ 0.23
CALD1-207ENST00000430085 PARP1P09874 1014 aaKnown RBP16.47■□□□□ 0.23
CALD1-207ENST00000430085 SHMT1P34896 483 aa16.47■□□□□ 0.23
CALD1-207ENST00000430085 MAP3K11Q16584 847 aa16.47■□□□□ 0.23
CALD1-207ENST00000430085 PFKFB3Q16875 520 aaPredicted RBP16.47■□□□□ 0.23
CALD1-207ENST00000430085 STAG2Q8N3U4 1231 aa16.47■□□□□ 0.23
CALD1-207ENST00000430085 JMYQ8N9B5 988 aa16.47■□□□□ 0.23
CALD1-207ENST00000430085 PIBF1Q8WXW3 757 aa16.47■□□□□ 0.23
CALD1-207ENST00000430085 PANK2Q9BZ23 570 aa16.47■□□□□ 0.23
CALD1-207ENST00000430085 MTMR4Q9NYA4 1195 aa16.47■□□□□ 0.23
CALD1-207ENST00000430085 PI4KBQ9UBF8 816 aa16.47■□□□□ 0.23
CALD1-207ENST00000430085 LTBP3Q9NS15 1303 aa16.47■□□□□ 0.23
CALD1-207ENST00000430085 DICER1Q9UPY3 1922 aaKnown RBP16.47■□□□□ 0.23
CALD1-207ENST00000430085 NOVP48745 357 aa16.47■□□□□ 0.23
CALD1-207ENST00000430085 SLC39A14Q15043 492 aa16.47■□□□□ 0.23
CALD1-207ENST00000430085 CAMK4Q16566 473 aa16.47■□□□□ 0.23
CALD1-207ENST00000430085 RILPL1Q5EBL4 403 aa16.47■□□□□ 0.23
CALD1-207ENST00000430085 FSIP1Q8NA03 581 aa16.47■□□□□ 0.23
CALD1-207ENST00000430085 MRPS27Q92552 414 aaKnown RBP16.47■□□□□ 0.23
CALD1-207ENST00000430085 ANP32BQ92688 251 aaKnown RBP16.47■□□□□ 0.23
CALD1-207ENST00000430085 CLSTN2Q9H4D0 955 aa16.47■□□□□ 0.23
CALD1-207ENST00000430085 TMOD2Q9NZR1 351 aa16.47■□□□□ 0.23
CALD1-207ENST00000430085 COL4A5P29400 1685 aa16.46■□□□□ 0.23
CALD1-207ENST00000430085 A0A1W2PQ27 194 aa16.46■□□□□ 0.23
CALD1-207ENST00000430085 A0A1W2PQ64 194 aa16.46■□□□□ 0.23
CALD1-207ENST00000430085 A0A1W2PQD8 194 aa16.46■□□□□ 0.23
CALD1-207ENST00000430085 PALM3A6NDB9 673 aaPredicted RBP16.46■□□□□ 0.23
CALD1-207ENST00000430085 MPHOSPH10O00566 681 aaKnown RBP16.46■□□□□ 0.23
CALD1-207ENST00000430085 NR5A1Q13285 461 aa16.46■□□□□ 0.23
CALD1-207ENST00000430085 OXER1Q8TDS5 423 aa16.46■□□□□ 0.23
CALD1-207ENST00000430085 PRMT6Q96LA8 375 aaPredicted RBP16.46■□□□□ 0.23
CALD1-207ENST00000430085 CCDC17Q96LX7 622 aa16.46■□□□□ 0.23
CALD1-207ENST00000430085 DDTLA6NHG4 134 aaPredicted RBP16.45■□□□□ 0.22
CALD1-207ENST00000430085 ENTPD3O75355 529 aa16.45■□□□□ 0.22
CALD1-207ENST00000430085 TTLL1O95922 423 aa16.45■□□□□ 0.22
CALD1-207ENST00000430085 FAM160A1Q05DH4 1040 aa16.45■□□□□ 0.22
CALD1-207ENST00000430085 DLGAP5Q15398 846 aa16.45■□□□□ 0.22
CALD1-207ENST00000430085 PPP4R3BQ5MIZ7 849 aa16.45■□□□□ 0.22
CALD1-207ENST00000430085 SHISA4Q96DD7 197 aa16.45■□□□□ 0.22
CALD1-207ENST00000430085 IGKV6D-41A0A0C4DH26 115 aa16.45■□□□□ 0.22
CALD1-207ENST00000430085 KLRF2D3W0D1 207 aa16.45■□□□□ 0.22
CALD1-207ENST00000430085 PPP6R2O75170 966 aa16.45■□□□□ 0.22
CALD1-207ENST00000430085 GOLGA8HP0CJ92 632 aa16.45■□□□□ 0.22
CALD1-207ENST00000430085 NLRP5P59047 1200 aa16.45■□□□□ 0.22
CALD1-207ENST00000430085 JDP2Q8WYK2 163 aa16.45■□□□□ 0.22
CALD1-207ENST00000430085 GOLPH3LQ9H4A5 285 aa16.45■□□□□ 0.22
CALD1-207ENST00000430085 SPDYE2BA6NHP3 402 aa16.44■□□□□ 0.22
CALD1-207ENST00000430085 KINO60870 393 aaKnown RBP16.44■□□□□ 0.22
CALD1-207ENST00000430085 SPDYE6P0CI01 402 aa16.44■□□□□ 0.22
CALD1-207ENST00000430085 CCDC192P0DO97 292 aa16.44■□□□□ 0.22
CALD1-207ENST00000430085 LMNB1P20700 586 aa16.44■□□□□ 0.22
CALD1-207ENST00000430085 MARCKSP29966 332 aaPredicted RBP16.44■□□□□ 0.22
CALD1-207ENST00000430085 EIF6P56537 245 aaKnown RBP16.44■□□□□ 0.22
CALD1-207ENST00000430085 PTPAQ15257 358 aa16.44■□□□□ 0.22
CALD1-207ENST00000430085 FOXP4Q8IVH2 680 aaPredicted RBP16.44■□□□□ 0.22
CALD1-207ENST00000430085 GMLQ99445 158 aa16.44■□□□□ 0.22
CALD1-207ENST00000430085 CABP5Q9NP86 173 aa16.44■□□□□ 0.22
CALD1-207ENST00000430085 SH3GLB2Q9NR46 395 aa16.44■□□□□ 0.22
CALD1-207ENST00000430085 CLIP2Q9UDT6 1046 aa16.44■□□□□ 0.22
CALD1-207ENST00000430085 ZBTB12Q9Y330 459 aaPredicted RBP16.44■□□□□ 0.22
CALD1-207ENST00000430085 CALML3P27482 149 aa16.43■□□□□ 0.22
CALD1-207ENST00000430085 USP17L2Q6R6M4 530 aa16.43■□□□□ 0.22
CALD1-207ENST00000430085 SH3BP5LQ7L8J4 393 aa16.43■□□□□ 0.22
CALD1-207ENST00000430085 LRRC47Q8N1G4 583 aaKnown RBP16.43■□□□□ 0.22
CALD1-207ENST00000430085 RNF214Q8ND24 703 aa16.43■□□□□ 0.22
CALD1-207ENST00000430085 AGBL3Q8NEM8 1001 aa16.43■□□□□ 0.22
CALD1-207ENST00000430085 SPZ1Q9BXG8 430 aa16.43■□□□□ 0.22
CALD1-207ENST00000430085 CEP131Q9UPN4 1083 aa16.43■□□□□ 0.22
CALD1-207ENST00000430085 TOB1P50616 345 aaPredicted RBP16.43■□□□□ 0.22
CALD1-207ENST00000430085 CERKLQ49MI3 558 aaPredicted RBP16.43■□□□□ 0.22
CALD1-207ENST00000430085 DNAJC18Q9H819 358 aa16.43■□□□□ 0.22
CALD1-207ENST00000430085 RNF181Q9P0P0 153 aa16.43■□□□□ 0.22
CALD1-207ENST00000430085 NOL7Q9UMY1 257 aaKnown RBP16.43■□□□□ 0.22
CALD1-207ENST00000430085 ATRNL1Q5VV63 1379 aa16.42■□□□□ 0.22
CALD1-207ENST00000430085 COL2A1P02458 1487 aaPredicted RBP16.42■□□□□ 0.22
CALD1-207ENST00000430085 A0A1B0GVL5 298 aa16.42■□□□□ 0.22
CALD1-207ENST00000430085 USP17L5A8MUK1 530 aa16.42■□□□□ 0.22
CALD1-207ENST00000430085 CTAGE5O15320 804 aa16.42■□□□□ 0.22
CALD1-207ENST00000430085 CYTH3O43739 400 aa16.42■□□□□ 0.22
CALD1-207ENST00000430085 PDHBP11177 359 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms