RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 SERPINB13Q9UIV8 391 aa13.12□□□□□ -0.31
CECR3-201ENST00000428828 ANAPC4Q9UJX5 808 aa13.12□□□□□ -0.31
CECR3-201ENST00000428828 TRPM7Q96QT4 1865 aa13.12□□□□□ -0.31
CECR3-201ENST00000428828 B4E1Z4 1266 aa13.11□□□□□ -0.31
CECR3-201ENST00000428828 AP5Z1O43299 807 aa13.11□□□□□ -0.31
CECR3-201ENST00000428828 TRDNQ13061 729 aa13.11□□□□□ -0.31
CECR3-201ENST00000428828 RALYLQ86SE5 291 aaKnown RBP13.11□□□□□ -0.31
CECR3-201ENST00000428828 NKX2-3Q8TAU0 364 aa13.11□□□□□ -0.31
CECR3-201ENST00000428828 FAM200AQ8TCP9 573 aa13.11□□□□□ -0.31
CECR3-201ENST00000428828 ZC3H15Q8WU90 426 aaKnown RBP13.11□□□□□ -0.31
CECR3-201ENST00000428828 KCNB2Q92953 911 aa13.11□□□□□ -0.31
CECR3-201ENST00000428828 TEPSINQ96N21 525 aa13.11□□□□□ -0.31
CECR3-201ENST00000428828 UPF3BQ9BZI7 483 aaKnown RBP13.11□□□□□ -0.31
CECR3-201ENST00000428828 MKNK2Q9HBH9 465 aa13.11□□□□□ -0.31
CECR3-201ENST00000428828 FZD1Q9UP38 647 aa13.11□□□□□ -0.31
CECR3-201ENST00000428828 DOCK1Q14185 1865 aa13.11□□□□□ -0.31
CECR3-201ENST00000428828 ELP1O95163 1332 aa13.11□□□□□ -0.31
CECR3-201ENST00000428828 RANBP6O60518 1105 aaKnown RBP13.11□□□□□ -0.31
CECR3-201ENST00000428828 TUBB4AP04350 444 aa13.11□□□□□ -0.31
CECR3-201ENST00000428828 CCDC192P0DO97 292 aa13.11□□□□□ -0.31
CECR3-201ENST00000428828 CDC25BP30305 580 aa13.11□□□□□ -0.31
CECR3-201ENST00000428828 CDK8P49336 464 aa13.11□□□□□ -0.31
CECR3-201ENST00000428828 PDE4BQ07343 736 aa13.11□□□□□ -0.31
CECR3-201ENST00000428828 GPS2Q13227 327 aa13.11□□□□□ -0.31
CECR3-201ENST00000428828 PRKG1Q13976 671 aa13.11□□□□□ -0.31
CECR3-201ENST00000428828 KRT32Q14532 448 aa13.11□□□□□ -0.31
CECR3-201ENST00000428828 C16orf86Q6ZW13 317 aa13.11□□□□□ -0.31
CECR3-201ENST00000428828 CHST3Q7LGC8 479 aa13.11□□□□□ -0.31
CECR3-201ENST00000428828 GOLGA6L1Q8N7Z2 621 aa13.11□□□□□ -0.31
CECR3-201ENST00000428828 IQUBQ8NA54 791 aa13.11□□□□□ -0.31
CECR3-201ENST00000428828 TCEANC2Q96MN5 208 aa13.11□□□□□ -0.31
CECR3-201ENST00000428828 RNF41Q9H4P4 317 aaPredicted RBP13.11□□□□□ -0.31
CECR3-201ENST00000428828 DNAJC18Q9H819 358 aa13.11□□□□□ -0.31
CECR3-201ENST00000428828 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.11□□□□□ -0.31
CECR3-201ENST00000428828 SSC5DA1L4H1 1573 aa13.1□□□□□ -0.31
CECR3-201ENST00000428828 SLU7O95391 586 aaKnown RBP13.1□□□□□ -0.31
CECR3-201ENST00000428828 YY1P25490 414 aa13.1□□□□□ -0.31
CECR3-201ENST00000428828 FAM47AQ5JRC9 791 aa13.1□□□□□ -0.31
CECR3-201ENST00000428828 NYAP1Q6ZVC0 841 aa13.1□□□□□ -0.31
CECR3-201ENST00000428828 NCOA7Q8NI08 942 aa13.1□□□□□ -0.31
CECR3-201ENST00000428828 C16orf45Q96MC5 204 aaPredicted RBP13.1□□□□□ -0.31
CECR3-201ENST00000428828 NEK1Q96PY6 1258 aa13.1□□□□□ -0.31
CECR3-201ENST00000428828 PSD3Q9NYI0 1048 aa13.1□□□□□ -0.31
CECR3-201ENST00000428828 PGAP2Q9UHJ9 254 aa13.1□□□□□ -0.31
CECR3-201ENST00000428828 ATP6V1DQ9Y5K8 247 aa13.1□□□□□ -0.31
CECR3-201ENST00000428828 GREB1LQ9C091 1923 aaPredicted RBP13.1□□□□□ -0.31
CECR3-201ENST00000428828 PTGS1P23219 599 aa13.09□□□□□ -0.31
CECR3-201ENST00000428828 TSGA10IPQ3SY00 556 aa13.09□□□□□ -0.31
CECR3-201ENST00000428828 LDHDQ86WU2 507 aa13.09□□□□□ -0.31
CECR3-201ENST00000428828 EHD4Q9H223 541 aa13.09□□□□□ -0.31
CECR3-201ENST00000428828 CNNM2Q9H8M5 875 aa13.09□□□□□ -0.31
CECR3-201ENST00000428828 ZNF215Q9UL58 517 aaPredicted RBP13.09□□□□□ -0.31
CECR3-201ENST00000428828 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.09□□□□□ -0.31
CECR3-201ENST00000428828 PPP2R3BQ9Y5P8 575 aa13.09□□□□□ -0.31
CECR3-201ENST00000428828 FHOD1Q9Y613 1164 aa13.09□□□□□ -0.31
CECR3-201ENST00000428828 TRAF5O00463 557 aa13.09□□□□□ -0.31
CECR3-201ENST00000428828 GDF11O95390 407 aa13.09□□□□□ -0.31
CECR3-201ENST00000428828 PSMA5P28066 241 aa13.09□□□□□ -0.31
CECR3-201ENST00000428828 SHMT1P34896 483 aa13.09□□□□□ -0.31
CECR3-201ENST00000428828 GABPAQ06546 454 aa13.09□□□□□ -0.31
CECR3-201ENST00000428828 FMR1Q06787 632 aaKnown RBP eCLIP13.09□□□□□ -0.31
CECR3-201ENST00000428828 BLOC1S2Q6QNY1 142 aa13.09□□□□□ -0.31
CECR3-201ENST00000428828 CDC37L1Q7L3B6 337 aa13.09□□□□□ -0.31
CECR3-201ENST00000428828 CDCA5Q96FF9 252 aa13.09□□□□□ -0.31
CECR3-201ENST00000428828 CHAMP1Q96JM3 812 aa13.09□□□□□ -0.31
CECR3-201ENST00000428828 ZKSCAN3Q9BRR0 538 aa13.09□□□□□ -0.31
CECR3-201ENST00000428828 LRRC2Q9BYS8 371 aa13.09□□□□□ -0.31
CECR3-201ENST00000428828 UBXN6Q9BZV1 441 aa13.09□□□□□ -0.31
CECR3-201ENST00000428828 KRT23Q9C075 422 aa13.09□□□□□ -0.31
CECR3-201ENST00000428828 ZNF408Q9H9D4 720 aa13.09□□□□□ -0.31
CECR3-201ENST00000428828 ZNF446Q9NWS9 450 aa13.09□□□□□ -0.31
CECR3-201ENST00000428828 TSPY2A6NKD2 308 aa13.08□□□□□ -0.32
CECR3-201ENST00000428828 MYO1CO00159 1063 aa13.08□□□□□ -0.32
CECR3-201ENST00000428828 MPHOSPH10O00566 681 aaKnown RBP13.08□□□□□ -0.32
CECR3-201ENST00000428828 RASA1P20936 1047 aa13.08□□□□□ -0.32
CECR3-201ENST00000428828 TPD52L1Q16890 204 aaPredicted RBP13.08□□□□□ -0.32
CECR3-201ENST00000428828 SHROOM1Q2M3G4 852 aaPredicted RBP13.08□□□□□ -0.32
CECR3-201ENST00000428828 CYB5R4Q7L1T6 521 aa13.08□□□□□ -0.32
CECR3-201ENST00000428828 PLA2G4DQ86XP0 818 aa13.08□□□□□ -0.32
CECR3-201ENST00000428828 FOXP4Q8IVH2 680 aaPredicted RBP13.08□□□□□ -0.32
CECR3-201ENST00000428828 ZNF444Q8N0Y2 327 aaPredicted RBP13.08□□□□□ -0.32
CECR3-201ENST00000428828 ESR2Q92731 530 aa13.08□□□□□ -0.32
CECR3-201ENST00000428828 ZNF287Q9HBT7 754 aa13.08□□□□□ -0.32
CECR3-201ENST00000428828 SWAP70Q9UH65 585 aa13.08□□□□□ -0.32
CECR3-201ENST00000428828 PAPPA2Q9BXP8 1791 aa13.08□□□□□ -0.32
CECR3-201ENST00000428828 ORC4O43929 436 aa13.07□□□□□ -0.32
CECR3-201ENST00000428828 TSPY3P0CV98 308 aa13.07□□□□□ -0.32
CECR3-201ENST00000428828 TSPY8P0CW00 308 aa13.07□□□□□ -0.32
CECR3-201ENST00000428828 NEK4P51957 841 aa13.07□□□□□ -0.32
CECR3-201ENST00000428828 MAPK8IP2Q13387 824 aaPredicted RBP13.07□□□□□ -0.32
CECR3-201ENST00000428828 NAA30Q147X3 362 aaPredicted RBP13.07□□□□□ -0.32
CECR3-201ENST00000428828 NOL8Q76FK4 1167 aaKnown RBP13.07□□□□□ -0.32
CECR3-201ENST00000428828 MB21D2Q8IYB1 491 aaPredicted RBP13.07□□□□□ -0.32
CECR3-201ENST00000428828 L2HGDHQ9H9P8 463 aa13.07□□□□□ -0.32
CECR3-201ENST00000428828 HERC5Q9UII4 1024 aaKnown RBP13.07□□□□□ -0.32
CECR3-201ENST00000428828 CYP46A1Q9Y6A2 500 aa13.07□□□□□ -0.32
CECR3-201ENST00000428828 CAVIN2O95810 425 aa13.07□□□□□ -0.32
CECR3-201ENST00000428828 AKR1B1P15121 316 aa13.07□□□□□ -0.32
CECR3-201ENST00000428828 RPS6KB1P23443 525 aa13.07□□□□□ -0.32
CECR3-201ENST00000428828 TFAP4Q01664 338 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms