RNA–Protein interactions for RNA: ENST00000428214.5

PEX1-203, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 1 (best) BASIC

Gene PEX1, Length 3,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-203ENST00000428214 SMCHD1A6NHR9 2005 aa12.91□□□□□ -0.34
PEX1-203ENST00000428214 STK36Q9NRP7 1315 aa12.91□□□□□ -0.34
PEX1-203ENST00000428214 DDAH1O94760 285 aa12.91□□□□□ -0.34
PEX1-203ENST00000428214 DEXIO95424 95 aa12.91□□□□□ -0.34
PEX1-203ENST00000428214 SLC16A2P36021 539 aa12.91□□□□□ -0.34
PEX1-203ENST00000428214 ZNF445P59923 1031 aa12.91□□□□□ -0.34
PEX1-203ENST00000428214 TGFB2P61812 414 aa12.91□□□□□ -0.34
PEX1-203ENST00000428214 DGKHQ86XP1 1220 aa12.91□□□□□ -0.34
PEX1-203ENST00000428214 MAP3K14Q99558 947 aa12.91□□□□□ -0.34
PEX1-203ENST00000428214 SCAND2PQ9GZW5 306 aaPredicted RBP12.91□□□□□ -0.34
PEX1-203ENST00000428214 MTMR4Q9NYA4 1195 aa12.91□□□□□ -0.34
PEX1-203ENST00000428214 RCOR1Q9UKL0 485 aa12.91□□□□□ -0.34
PEX1-203ENST00000428214 SIAH1Q8IUQ4 282 aa12.91□□□□□ -0.34
PEX1-203ENST00000428214 CABP5Q9NP86 173 aa12.91□□□□□ -0.34
PEX1-203ENST00000428214 ZNRF3Q9ULT6 936 aa12.91□□□□□ -0.34
PEX1-203ENST00000428214 ELP1O95163 1332 aa12.9□□□□□ -0.34
PEX1-203ENST00000428214 U2AF2P26368 475 aaKnown RBP eCLIP12.9□□□□□ -0.342e-8■■■□□ 17.7
PEX1-203ENST00000428214 SNAP25P60880 206 aa12.9□□□□□ -0.34
PEX1-203ENST00000428214 GNL2Q13823 731 aaKnown RBP12.9□□□□□ -0.34
PEX1-203ENST00000428214 SAMD7Q7Z3H4 446 aa12.9□□□□□ -0.34
PEX1-203ENST00000428214 NIM1KQ8IY84 436 aa12.9□□□□□ -0.34
PEX1-203ENST00000428214 KIF3AQ9Y496 699 aa12.9□□□□□ -0.34
PEX1-203ENST00000428214 CNTNAP1P78357 1384 aa12.9□□□□□ -0.34
PEX1-203ENST00000428214 NUP88Q99567 741 aaPredicted RBP12.9□□□□□ -0.34
PEX1-203ENST00000428214 MTA3Q9BTC8 594 aa12.9□□□□□ -0.34
PEX1-203ENST00000428214 RNF26Q9BY78 433 aaPredicted RBP12.9□□□□□ -0.34
PEX1-203ENST00000428214 GPCPD1Q9NPB8 672 aa12.9□□□□□ -0.34
PEX1-203ENST00000428214 SNW1Q13573 536 aaKnown RBP12.9□□□□□ -0.35
PEX1-203ENST00000428214 SEPT2Q15019 361 aa12.9□□□□□ -0.35
PEX1-203ENST00000428214 PRAMEF18Q5VWM3 479 aa12.9□□□□□ -0.35
PEX1-203ENST00000428214 CC2D2BQ6DHV5 1058 aa12.9□□□□□ -0.35
PEX1-203ENST00000428214 KCTD1Q719H9 257 aa12.9□□□□□ -0.35
PEX1-203ENST00000428214 NOSTRINQ8IVI9 506 aa12.9□□□□□ -0.35
PEX1-203ENST00000428214 SUPT20HQ8NEM7 779 aa12.9□□□□□ -0.35
PEX1-203ENST00000428214 PHF20Q9BVI0 1012 aa12.9□□□□□ -0.35
PEX1-203ENST00000428214 KLRF2D3W0D1 207 aa12.89□□□□□ -0.35
PEX1-203ENST00000428214 PRPF3O43395 683 aaKnown RBP12.89□□□□□ -0.35
PEX1-203ENST00000428214 GRM4Q14833 912 aa12.89□□□□□ -0.35
PEX1-203ENST00000428214 PTPAQ15257 358 aa12.89□□□□□ -0.35
PEX1-203ENST00000428214 ANO1Q5XXA6 986 aa12.89□□□□□ -0.35
PEX1-203ENST00000428214 TMED8Q6PL24 325 aaPredicted RBP12.89□□□□□ -0.35
PEX1-203ENST00000428214 CCAR1Q8IX12 1150 aaKnown RBP12.89□□□□□ -0.35
PEX1-203ENST00000428214 CSRNP1Q96S65 589 aa12.89□□□□□ -0.35
PEX1-203ENST00000428214 GJA3Q9Y6H8 435 aa12.89□□□□□ -0.35
PEX1-203ENST00000428214 ZNF541Q9H0D2 1346 aa12.89□□□□□ -0.35
PEX1-203ENST00000428214 IGKV6D-41A0A0C4DH26 115 aa12.89□□□□□ -0.35
PEX1-203ENST00000428214 NDUFA8P51970 172 aa12.89□□□□□ -0.35
PEX1-203ENST00000428214 TRIM29Q14134 588 aa12.89□□□□□ -0.35
PEX1-203ENST00000428214 WWC2Q6AWC2 1192 aa12.89□□□□□ -0.35
PEX1-203ENST00000428214 IDI2Q9BXS1 227 aa12.89□□□□□ -0.35
PEX1-203ENST00000428214 RTEL1Q9NZ71 1219 aa12.89□□□□□ -0.35
PEX1-203ENST00000428214 CCDC196A0A1B0GTZ2 297 aa12.89□□□□□ -0.35
PEX1-203ENST00000428214 PALM3A6NDB9 673 aaPredicted RBP12.89□□□□□ -0.35
PEX1-203ENST00000428214 WNT10BO00744 389 aa12.89□□□□□ -0.35
PEX1-203ENST00000428214 PDHBP11177 359 aa12.89□□□□□ -0.35
PEX1-203ENST00000428214 PTMSP20962 102 aa12.89□□□□□ -0.35
PEX1-203ENST00000428214 DGKZQ13574 1117 aa12.89□□□□□ -0.35
PEX1-203ENST00000428214 LRSAM1Q6UWE0 723 aa12.89□□□□□ -0.35
PEX1-203ENST00000428214 USP49Q70CQ1 688 aa12.89□□□□□ -0.35
PEX1-203ENST00000428214 TCP11L1Q9NUJ3 509 aa12.89□□□□□ -0.35
PEX1-203ENST00000428214 ZNF70Q9UC06 446 aaPredicted RBP12.89□□□□□ -0.35
PEX1-203ENST00000428214 CFAP45Q9UL16 551 aa12.89□□□□□ -0.35
PEX1-203ENST00000428214 STK38Q15208 465 aa12.88□□□□□ -0.35
PEX1-203ENST00000428214 AXDND1Q5T1B0 1012 aaPredicted RBP12.88□□□□□ -0.35
PEX1-203ENST00000428214 GREB1LQ9C091 1923 aaPredicted RBP12.88□□□□□ -0.35
PEX1-203ENST00000428214 GOLGA6L4A6NEF3 574 aa12.88□□□□□ -0.35
PEX1-203ENST00000428214 SCG2P13521 617 aa12.88□□□□□ -0.35
PEX1-203ENST00000428214 CCDC183Q5T5S1 534 aa12.88□□□□□ -0.35
PEX1-203ENST00000428214 ANKS1AQ92625 1134 aa12.88□□□□□ -0.35
PEX1-203ENST00000428214 PIGSQ96S52 555 aa12.88□□□□□ -0.35
PEX1-203ENST00000428214 TBC1D10BQ4KMP7 808 aaPredicted RBP12.87□□□□□ -0.35
PEX1-203ENST00000428214 KIAA1755Q5JYT7 1200 aa12.87□□□□□ -0.35
PEX1-203ENST00000428214 HEATR3Q7Z4Q2 680 aa12.87□□□□□ -0.35
PEX1-203ENST00000428214 SPICE1Q8N0Z3 855 aa12.87□□□□□ -0.35
PEX1-203ENST00000428214 FHDC1Q9C0D6 1143 aaPredicted RBP12.87□□□□□ -0.35
PEX1-203ENST00000428214 A0A1W2PRG0 241 aa12.87□□□□□ -0.35
PEX1-203ENST00000428214 SPTLC2O15270 562 aa12.87□□□□□ -0.35
PEX1-203ENST00000428214 EEF2P13639 858 aaKnown RBP12.87□□□□□ -0.35
PEX1-203ENST00000428214 ECE1P42892 770 aa12.87□□□□□ -0.35
PEX1-203ENST00000428214 FKBP1AP62942 108 aaKnown RBP12.87□□□□□ -0.35
PEX1-203ENST00000428214 AKAP17AQ02040 695 aaKnown RBP12.87□□□□□ -0.35
PEX1-203ENST00000428214 DLGAP5Q15398 846 aa12.87□□□□□ -0.35
PEX1-203ENST00000428214 FSIP1Q8NA03 581 aa12.87□□□□□ -0.35
PEX1-203ENST00000428214 GLIS2Q9BZE0 524 aaPredicted RBP12.87□□□□□ -0.35
PEX1-203ENST00000428214 GH2P01242 217 aa12.87□□□□□ -0.35
PEX1-203ENST00000428214 PFKFB3Q16875 520 aaPredicted RBP12.87□□□□□ -0.35
PEX1-203ENST00000428214 SHC4Q6S5L8 630 aa12.87□□□□□ -0.35
PEX1-203ENST00000428214 TNFRSF25Q93038 417 aa12.87□□□□□ -0.35
PEX1-203ENST00000428214 RBM28Q9NW13 759 aaKnown RBP12.87□□□□□ -0.35
PEX1-203ENST00000428214 ISY1Q9ULR0 285 aaKnown RBP12.87□□□□□ -0.35
PEX1-203ENST00000428214 PPP1R11O60927 126 aaPredicted RBP12.86□□□□□ -0.35
PEX1-203ENST00000428214 NASPP49321 788 aaPredicted RBP12.86□□□□□ -0.35
PEX1-203ENST00000428214 FUCA2Q9BTY2 467 aa12.86□□□□□ -0.35
PEX1-203ENST00000428214 POLR3EQ9NVU0 708 aa12.86□□□□□ -0.35
PEX1-203ENST00000428214 HLA-DOAP06340 250 aa12.86□□□□□ -0.35
PEX1-203ENST00000428214 CALM1P0DP23 149 aa12.86□□□□□ -0.35
PEX1-203ENST00000428214 CALM2P0DP24 149 aa12.86□□□□□ -0.35
PEX1-203ENST00000428214 CALM3P0DP25 149 aa12.86□□□□□ -0.35
PEX1-203ENST00000428214 NOVP48745 357 aa12.86□□□□□ -0.35
PEX1-203ENST00000428214 RCAN1P53805 252 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms