RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 PGBD1Q96JS3 809 aa20.08■□□□□ 0.81
FN1-208ENST00000426059 TRIM34Q9BYJ4 488 aa20.08■□□□□ 0.81
FN1-208ENST00000426059 ARFGEF1Q9Y6D6 1849 aa20.08■□□□□ 0.81
FN1-208ENST00000426059 IGKV6D-41A0A0C4DH26 115 aa20.08■□□□□ 0.8
FN1-208ENST00000426059 WNT10BO00744 389 aa20.08■□□□□ 0.8
FN1-208ENST00000426059 ENTPD3O75355 529 aa20.08■□□□□ 0.8
FN1-208ENST00000426059 GDF11O95390 407 aa20.08■□□□□ 0.8
FN1-208ENST00000426059 NR5A1Q13285 461 aa20.08■□□□□ 0.8
FN1-208ENST00000426059 GAS2L3Q86XJ1 694 aa20.08■□□□□ 0.8
FN1-208ENST00000426059 DIS3L2Q8IYB7 885 aaKnown RBP20.08■□□□□ 0.8
FN1-208ENST00000426059 ZNF396Q96N95 335 aaPredicted RBP20.08■□□□□ 0.8
FN1-208ENST00000426059 ELP1O95163 1332 aa20.07■□□□□ 0.8
FN1-208ENST00000426059 USP17L5A8MUK1 530 aa20.07■□□□□ 0.8
FN1-208ENST00000426059 NPM3O75607 178 aaKnown RBP20.07■□□□□ 0.8
FN1-208ENST00000426059 TNIP1Q15025 636 aa20.07■□□□□ 0.8
FN1-208ENST00000426059 SPDYE2Q495Y8 402 aa20.07■□□□□ 0.8
FN1-208ENST00000426059 CERKLQ49MI3 558 aaPredicted RBP20.07■□□□□ 0.8
FN1-208ENST00000426059 BRAPQ7Z569 592 aa20.07■□□□□ 0.8
FN1-208ENST00000426059 MYOZ2Q9NPC6 264 aa20.07■□□□□ 0.8
FN1-208ENST00000426059 PLIN4Q96Q06 1357 aa20.07■□□□□ 0.8
FN1-208ENST00000426059 CYTH3O43739 400 aa20.07■□□□□ 0.8
FN1-208ENST00000426059 NOVP48745 357 aa20.07■□□□□ 0.8
FN1-208ENST00000426059 ARHGAP27Q6ZUM4 889 aa20.07■□□□□ 0.8
FN1-208ENST00000426059 TMEM39BQ9GZU3 492 aa20.07■□□□□ 0.8
FN1-208ENST00000426059 CNTNAP1P78357 1384 aa20.06■□□□□ 0.8
FN1-208ENST00000426059 FRMPD2Q68DX3 1309 aaPredicted RBP20.06■□□□□ 0.8
FN1-208ENST00000426059 LTBP3Q9NS15 1303 aa20.06■□□□□ 0.8
FN1-208ENST00000426059 PALM3A6NDB9 673 aaPredicted RBP20.06■□□□□ 0.8
FN1-208ENST00000426059 KLRF2D3W0D1 207 aa20.06■□□□□ 0.8
FN1-208ENST00000426059 U2AF2P26368 475 aaKnown RBP eCLIP20.06■□□□□ 0.81e-8■■□□□ 13.6
FN1-208ENST00000426059 GMPSP49915 693 aaPredicted RBP20.06■□□□□ 0.8
FN1-208ENST00000426059 JAG1P78504 1218 aa20.06■□□□□ 0.8
FN1-208ENST00000426059 RRP1BQ14684 758 aaKnown RBP20.06■□□□□ 0.8
FN1-208ENST00000426059 FOXP4Q8IVH2 680 aaPredicted RBP20.06■□□□□ 0.8
FN1-208ENST00000426059 ATRNL1Q5VV63 1379 aa20.05■□□□□ 0.8
FN1-208ENST00000426059 SYCE3A1L190 88 aa20.05■□□□□ 0.8
FN1-208ENST00000426059 GOLGA6L4A6NEF3 574 aa20.05■□□□□ 0.8
FN1-208ENST00000426059 TTLL1O95922 423 aa20.05■□□□□ 0.8
FN1-208ENST00000426059 LIG1P18858 919 aa20.05■□□□□ 0.8
FN1-208ENST00000426059 SAMD7Q7Z3H4 446 aa20.05■□□□□ 0.8
FN1-208ENST00000426059 GPKOWQ92917 476 aaPredicted RBP eCLIP20.05■□□□□ 0.8
FN1-208ENST00000426059 MAP3K14Q99558 947 aa20.05■□□□□ 0.8
FN1-208ENST00000426059 RCOR1Q9UKL0 485 aa20.05■□□□□ 0.8
FN1-208ENST00000426059 MYH4Q9Y623 1939 aa20.05■□□□□ 0.8
FN1-208ENST00000426059 ZNF541Q9H0D2 1346 aa20.05■□□□□ 0.8
FN1-208ENST00000426059 FZD9O00144 591 aa20.05■□□□□ 0.8
FN1-208ENST00000426059 PARP1P09874 1014 aaKnown RBP20.05■□□□□ 0.8
FN1-208ENST00000426059 TATDN1Q6P1N9 297 aa20.05■□□□□ 0.8
FN1-208ENST00000426059 UBA5Q9GZZ9 404 aa20.05■□□□□ 0.8
FN1-208ENST00000426059 ADAMTS3O15072 1205 aa20.04■□□□□ 0.8
FN1-208ENST00000426059 RAD21O60216 631 aa20.04■□□□□ 0.8
FN1-208ENST00000426059 SCG2P13521 617 aa20.04■□□□□ 0.8
FN1-208ENST00000426059 SEPT2Q15019 361 aa20.04■□□□□ 0.8
FN1-208ENST00000426059 SAFBQ15424 915 aaKnown RBP eCLIP20.04■□□□□ 0.8
FN1-208ENST00000426059 ILDR2Q71H61 639 aa20.04■□□□□ 0.8
FN1-208ENST00000426059 MICALL2Q8IY33 904 aa20.04■□□□□ 0.8
FN1-208ENST00000426059 VAT1LQ9HCJ6 419 aa20.04■□□□□ 0.8
FN1-208ENST00000426059 ASTN2O75129 1339 aaPredicted RBP20.04■□□□□ 0.8
FN1-208ENST00000426059 GREB1LQ9C091 1923 aaPredicted RBP20.04■□□□□ 0.8
FN1-208ENST00000426059 PDHBP11177 359 aa20.03■□□□□ 0.8
FN1-208ENST00000426059 NOSTRINQ8IVI9 506 aa20.03■□□□□ 0.8
FN1-208ENST00000426059 MTMR14Q8NCE2 650 aa20.03■□□□□ 0.8
FN1-208ENST00000426059 FAM151AQ8WW52 585 aa20.03■□□□□ 0.8
FN1-208ENST00000426059 ZBED3Q96IU2 234 aaPredicted RBP20.03■□□□□ 0.8
FN1-208ENST00000426059 CCDC17Q96LX7 622 aa20.03■□□□□ 0.8
FN1-208ENST00000426059 PHF20Q9BVI0 1012 aa20.03■□□□□ 0.8
FN1-208ENST00000426059 RTEL1Q9NZ71 1219 aa20.03■□□□□ 0.8
FN1-208ENST00000426059 FAM205CA6NFA0 338 aa20.03■□□□□ 0.8
FN1-208ENST00000426059 PFKFB3Q16875 520 aaPredicted RBP20.03■□□□□ 0.8
FN1-208ENST00000426059 TBC1D10BQ4KMP7 808 aaPredicted RBP20.03■□□□□ 0.8
FN1-208ENST00000426059 MIGA2Q7L4E1 593 aa20.03■□□□□ 0.8
FN1-208ENST00000426059 BICD2Q8TD16 824 aa20.03■□□□□ 0.8
FN1-208ENST00000426059 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.03■□□□□ 0.8
FN1-208ENST00000426059 MYO1BO43795 1136 aa20.02■□□□□ 0.8
FN1-208ENST00000426059 XBP1P17861 261 aa20.02■□□□□ 0.8
FN1-208ENST00000426059 ME1P48163 572 aa20.02■□□□□ 0.8
FN1-208ENST00000426059 NOM1Q5C9Z4 860 aaKnown RBP20.02■□□□□ 0.8
FN1-208ENST00000426059 HOMER1Q86YM7 354 aa20.02■□□□□ 0.8
FN1-208ENST00000426059 LINC00301Q8NCQ3 95 aa20.02■□□□□ 0.8
FN1-208ENST00000426059 RGS22Q8NE09 1264 aa20.02■□□□□ 0.8
FN1-208ENST00000426059 CNOT7Q9UIV1 285 aaKnown RBP20.02■□□□□ 0.8
FN1-208ENST00000426059 EEF2P13639 858 aaKnown RBP20.02■□□□□ 0.8
FN1-208ENST00000426059 GNAQP50148 359 aa20.02■□□□□ 0.8
FN1-208ENST00000426059 STK38Q15208 465 aa20.02■□□□□ 0.8
FN1-208ENST00000426059 SF3A1Q15459 793 aaKnown RBP20.02■□□□□ 0.8
FN1-208ENST00000426059 ABCB5Q2M3G0 1257 aa20.02■□□□□ 0.8
FN1-208ENST00000426059 EARS2Q5JPH6 523 aaKnown RBP20.02■□□□□ 0.8
FN1-208ENST00000426059 ANO1Q5XXA6 986 aa20.02■□□□□ 0.8
FN1-208ENST00000426059 ATL3Q6DD88 541 aa20.02■□□□□ 0.8
FN1-208ENST00000426059 METTL16Q86W50 562 aaKnown RBP20.02■□□□□ 0.8
FN1-208ENST00000426059 GPCPD1Q9NPB8 672 aa20.02■□□□□ 0.8
FN1-208ENST00000426059 GH2P01242 217 aa20.01■□□□□ 0.79
FN1-208ENST00000426059 ATP2B1P20020 1258 aa20.01■□□□□ 0.79
FN1-208ENST00000426059 NPY5RQ15761 445 aa20.01■□□□□ 0.79
FN1-208ENST00000426059 GOLGA6L3A6NEY3 463 aa20.01■□□□□ 0.79
FN1-208ENST00000426059 TYW1BQ6NUM6 668 aa20.01■□□□□ 0.79
FN1-208ENST00000426059 SIAH1Q8IUQ4 282 aa20.01■□□□□ 0.79
FN1-208ENST00000426059 SYT17Q9BSW7 474 aa20.01■□□□□ 0.79
FN1-208ENST00000426059 FOXP1Q9H334 677 aaPredicted RBP20.01■□□□□ 0.79
FN1-208ENST00000426059 POLR3EQ9NVU0 708 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms