RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 SAMD1Q6SPF0 538 aaPredicted RBP14.8□□□□□ -0.04
HLA-DQB3-203ENST00000425319 RNF180Q86T96 592 aa14.8□□□□□ -0.04
HLA-DQB3-203ENST00000425319 KIF1BPQ96EK5 621 aa14.8□□□□□ -0.04
HLA-DQB3-203ENST00000425319 ATP8A2Q9NTI2 1148 aa14.8□□□□□ -0.04
HLA-DQB3-203ENST00000425319 TNNQ9UQP3 1299 aa14.8□□□□□ -0.04
HLA-DQB3-203ENST00000425319 CEP290O15078 2479 aa14.8□□□□□ -0.04
HLA-DQB3-203ENST00000425319 LOC285556D6RIA3 1793 aa14.79□□□□□ -0.04
HLA-DQB3-203ENST00000425319 POTEB2H3BUK9 544 aa14.79□□□□□ -0.04
HLA-DQB3-203ENST00000425319 DSG3P32926 999 aa14.79□□□□□ -0.04
HLA-DQB3-203ENST00000425319 SHMT1P34896 483 aa14.79□□□□□ -0.04
HLA-DQB3-203ENST00000425319 KCTD2Q14681 263 aa14.79□□□□□ -0.04
HLA-DQB3-203ENST00000425319 ZSCAN25Q6NSZ9 544 aa14.79□□□□□ -0.04
HLA-DQB3-203ENST00000425319 RPAP2Q8IXW5 612 aaPredicted RBP14.79□□□□□ -0.04
HLA-DQB3-203ENST00000425319 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.79□□□□□ -0.04
HLA-DQB3-203ENST00000425319 PHIPQ8WWQ0 1821 aa14.79□□□□□ -0.04
HLA-DQB3-203ENST00000425319 DNAJC2Q99543 621 aaKnown RBP14.79□□□□□ -0.04
HLA-DQB3-203ENST00000425319 BCL11AQ9H165 835 aa14.79□□□□□ -0.04
HLA-DQB3-203ENST00000425319 ANTXR1Q9H6X2 564 aa14.79□□□□□ -0.04
HLA-DQB3-203ENST00000425319 TLR7Q9NYK1 1049 aaKnown RBP14.79□□□□□ -0.04
HLA-DQB3-203ENST00000425319 FLRT1Q9NZU1 646 aa14.79□□□□□ -0.04
HLA-DQB3-203ENST00000425319 NRBP1Q9UHY1 535 aa14.79□□□□□ -0.04
HLA-DQB3-203ENST00000425319 EXOC6BQ9Y2D4 811 aa14.79□□□□□ -0.04
HLA-DQB3-203ENST00000425319 TACC3Q9Y6A5 838 aa14.79□□□□□ -0.04
HLA-DQB3-203ENST00000425319 WDR46O15213 610 aaKnown RBP14.78□□□□□ -0.04
HLA-DQB3-203ENST00000425319 RAD21O60216 631 aa14.78□□□□□ -0.04
HLA-DQB3-203ENST00000425319 RAB11FIP3O75154 756 aa14.78□□□□□ -0.04
HLA-DQB3-203ENST00000425319 RARBP10826 455 aa14.78□□□□□ -0.04
HLA-DQB3-203ENST00000425319 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.78□□□□□ -0.04
HLA-DQB3-203ENST00000425319 RHPN1Q8TCX5 695 aa14.78□□□□□ -0.04
HLA-DQB3-203ENST00000425319 RIOK1Q9BRS2 568 aaKnown RBP14.78□□□□□ -0.04
HLA-DQB3-203ENST00000425319 GOPCQ9HD26 462 aa14.78□□□□□ -0.04
HLA-DQB3-203ENST00000425319 ZNF532Q9HCE3 1301 aa14.77□□□□□ -0.04
HLA-DQB3-203ENST00000425319 PTPRFP10586 1907 aa14.77□□□□□ -0.04
HLA-DQB3-203ENST00000425319 GOLIM4O00461 696 aa14.77□□□□□ -0.05
HLA-DQB3-203ENST00000425319 CYBAP13498 195 aa14.77□□□□□ -0.05
HLA-DQB3-203ENST00000425319 PDE6AP16499 860 aa14.77□□□□□ -0.05
HLA-DQB3-203ENST00000425319 HNRNPUQ00839 825 aaKnown RBP eCLIP14.77□□□□□ -0.05
HLA-DQB3-203ENST00000425319 ICA1Q05084 483 aa14.77□□□□□ -0.05
HLA-DQB3-203ENST00000425319 CEP85Q6P2H3 762 aa14.77□□□□□ -0.05
HLA-DQB3-203ENST00000425319 CCDC174Q6PII3 467 aa14.77□□□□□ -0.05
HLA-DQB3-203ENST00000425319 MMP19Q99542 508 aa14.77□□□□□ -0.05
HLA-DQB3-203ENST00000425319 KANSL2Q9H9L4 492 aa14.77□□□□□ -0.05
HLA-DQB3-203ENST00000425319 IL1RAPL2Q9NP60 686 aa14.77□□□□□ -0.05
HLA-DQB3-203ENST00000425319 CNPY2Q9Y2B0 182 aa14.77□□□□□ -0.05
HLA-DQB3-203ENST00000425319 TMX2Q9Y320 296 aa14.77□□□□□ -0.05
HLA-DQB3-203ENST00000425319 APBB1O00213 710 aa14.76□□□□□ -0.05
HLA-DQB3-203ENST00000425319 ADCYAP1R1P41586 468 aa14.76□□□□□ -0.05
HLA-DQB3-203ENST00000425319 GABPAQ06546 454 aa14.76□□□□□ -0.05
HLA-DQB3-203ENST00000425319 DDX11Q96FC9 970 aa14.76□□□□□ -0.05
HLA-DQB3-203ENST00000425319 FAM161BQ96MY7 647 aa14.76□□□□□ -0.05
HLA-DQB3-203ENST00000425319 VCPKMTQ9H867 229 aa14.76□□□□□ -0.05
HLA-DQB3-203ENST00000425319 DCP1AQ9NPI6 582 aaPredicted RBP14.76□□□□□ -0.05
HLA-DQB3-203ENST00000425319 DIS3Q9Y2L1 958 aaKnown RBP14.76□□□□□ -0.05
HLA-DQB3-203ENST00000425319 RAG1P15918 1043 aa14.75□□□□□ -0.05
HLA-DQB3-203ENST00000425319 GUCY1A2P33402 732 aa14.75□□□□□ -0.05
HLA-DQB3-203ENST00000425319 STAT3P40763 770 aa14.75□□□□□ -0.05
HLA-DQB3-203ENST00000425319 SMAD3P84022 425 aaKnown RBP14.75□□□□□ -0.05
HLA-DQB3-203ENST00000425319 C1orf53Q5VUE5 145 aa14.75□□□□□ -0.05
HLA-DQB3-203ENST00000425319 POTEEQ6S8J3 1075 aa14.75□□□□□ -0.05
HLA-DQB3-203ENST00000425319 NUP133Q8WUM0 1156 aa14.75□□□□□ -0.05
HLA-DQB3-203ENST00000425319 SDR42E1Q8WUS8 393 aa14.75□□□□□ -0.05
HLA-DQB3-203ENST00000425319 SYMPKQ92797 1274 aaKnown RBP14.75□□□□□ -0.05
HLA-DQB3-203ENST00000425319 FERMT2Q96AC1 680 aa14.75□□□□□ -0.05
HLA-DQB3-203ENST00000425319 MAML3Q96JK9 1138 aa14.75□□□□□ -0.05
HLA-DQB3-203ENST00000425319 SPC25Q9HBM1 224 aa14.75□□□□□ -0.05
HLA-DQB3-203ENST00000425319 ZNF287Q9HBT7 754 aa14.75□□□□□ -0.05
HLA-DQB3-203ENST00000425319 XPNPEP3Q9NQH7 507 aa14.75□□□□□ -0.05
HLA-DQB3-203ENST00000425319 A0A1W2PRG0 241 aa14.74□□□□□ -0.05
HLA-DQB3-203ENST00000425319 DCDC2CA8MYV0 355 aa14.74□□□□□ -0.05
HLA-DQB3-203ENST00000425319 COBLO75128 1261 aa14.74□□□□□ -0.05
HLA-DQB3-203ENST00000425319 LRRC41Q15345 812 aa14.74□□□□□ -0.05
HLA-DQB3-203ENST00000425319 ANO1Q5XXA6 986 aa14.74□□□□□ -0.05
HLA-DQB3-203ENST00000425319 SPICE1Q8N0Z3 855 aa14.74□□□□□ -0.05
HLA-DQB3-203ENST00000425319 BADQ92934 168 aa14.74□□□□□ -0.05
HLA-DQB3-203ENST00000425319 ARMT1Q9H993 441 aa14.74□□□□□ -0.05
HLA-DQB3-203ENST00000425319 PAG1Q9NWQ8 432 aa14.74□□□□□ -0.05
HLA-DQB3-203ENST00000425319 DDX19BQ9UMR2 479 aa14.74□□□□□ -0.05
HLA-DQB3-203ENST00000425319 DDX60LQ5H9U9 1706 aaKnown RBP14.74□□□□□ -0.05
HLA-DQB3-203ENST00000425319 DOCK3Q8IZD9 2030 aa14.73□□□□□ -0.05
HLA-DQB3-203ENST00000425319 AKR1A1P14550 325 aa14.73□□□□□ -0.05
HLA-DQB3-203ENST00000425319 CDK8P49336 464 aa14.73□□□□□ -0.05
HLA-DQB3-203ENST00000425319 SHHQ15465 462 aa14.73□□□□□ -0.05
HLA-DQB3-203ENST00000425319 TRIM60Q495X7 471 aa14.73□□□□□ -0.05
HLA-DQB3-203ENST00000425319 PRAMEF19Q5SWL8 479 aa14.73□□□□□ -0.05
HLA-DQB3-203ENST00000425319 MSL3Q8N5Y2 521 aaKnown RBP14.73□□□□□ -0.05
HLA-DQB3-203ENST00000425319 TRPV1Q8NER1 839 aa14.73□□□□□ -0.05
HLA-DQB3-203ENST00000425319 VTI1AQ96AJ9 217 aa14.73□□□□□ -0.05
HLA-DQB3-203ENST00000425319 ATG4CQ96DT6 458 aa14.73□□□□□ -0.05
HLA-DQB3-203ENST00000425319 TINF2Q9BSI4 451 aa14.73□□□□□ -0.05
HLA-DQB3-203ENST00000425319 TSEN34Q9BSV6 310 aaKnown RBP14.73□□□□□ -0.05
HLA-DQB3-203ENST00000425319 SEMA6BQ9H3T3 888 aa14.73□□□□□ -0.05
HLA-DQB3-203ENST00000425319 MKNK2Q9HBH9 465 aa14.73□□□□□ -0.05
HLA-DQB3-203ENST00000425319 FAM184BQ9ULE4 1060 aa14.73□□□□□ -0.05
HLA-DQB3-203ENST00000425319 ATAD5Q96QE3 1844 aa14.73□□□□□ -0.05
HLA-DQB3-203ENST00000425319 USP17L12C9JPN9 530 aa14.72□□□□□ -0.05
HLA-DQB3-203ENST00000425319 USP17L21D6R901 530 aa14.72□□□□□ -0.05
HLA-DQB3-203ENST00000425319 ZBED4O75132 1171 aa14.72□□□□□ -0.05
HLA-DQB3-203ENST00000425319 CLTBP09497 229 aa14.72□□□□□ -0.05
HLA-DQB3-203ENST00000425319 LRRFIP1Q32MZ4 808 aaKnown RBP14.72□□□□□ -0.05
HLA-DQB3-203ENST00000425319 RIOX2Q8IUF8 465 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms