RNA–Protein interactions for RNA: ENST00000424647.1

PPM1F-204, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 2

Gene PPM1F, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-204ENST00000424647 VCPKMTQ9H867 229 aa19.4■□□□□ 0.7
PPM1F-204ENST00000424647 TMX2Q9Y320 296 aa19.4■□□□□ 0.7
PPM1F-204ENST00000424647 SPDYE16A6NNV3 312 aaPredicted RBP19.39■□□□□ 0.69
PPM1F-204ENST00000424647 HMGCRP04035 888 aa19.39■□□□□ 0.69
PPM1F-204ENST00000424647 IFNL3Q8IZI9 196 aa19.39■□□□□ 0.69
PPM1F-204ENST00000424647 SPICE1Q8N0Z3 855 aa19.39■□□□□ 0.69
PPM1F-204ENST00000424647 PORCNQ9H237 461 aa19.39■□□□□ 0.69
PPM1F-204ENST00000424647 GJB1P08034 283 aa19.38■□□□□ 0.69
PPM1F-204ENST00000424647 SLC3A2P08195 630 aaKnown RBP19.38■□□□□ 0.69
PPM1F-204ENST00000424647 EEF2P13639 858 aaKnown RBP19.38■□□□□ 0.69
PPM1F-204ENST00000424647 RASA1P20936 1047 aa19.38■□□□□ 0.69
PPM1F-204ENST00000424647 Q3C1V9 767 aa19.38■□□□□ 0.69
PPM1F-204ENST00000424647 WDR78Q5VTH9 848 aa19.38■□□□□ 0.69
PPM1F-204ENST00000424647 GPR142Q7Z601 462 aa19.38■□□□□ 0.69
PPM1F-204ENST00000424647 PLEKHH3Q7Z736 793 aa19.38■□□□□ 0.69
PPM1F-204ENST00000424647 CHD1LQ86WJ1 897 aa19.38■□□□□ 0.69
PPM1F-204ENST00000424647 UNC93B1Q9H1C4 597 aa19.38■□□□□ 0.69
PPM1F-204ENST00000424647 GOPCQ9HD26 462 aa19.38■□□□□ 0.69
PPM1F-204ENST00000424647 GJD2Q9UKL4 321 aa19.38■□□□□ 0.69
PPM1F-204ENST00000424647 TRIM6-TRIM34B2RNG4 842 aa19.37■□□□□ 0.69
PPM1F-204ENST00000424647 WDR46O15213 610 aaKnown RBP19.37■□□□□ 0.69
PPM1F-204ENST00000424647 RAD21O60216 631 aa19.37■□□□□ 0.69
PPM1F-204ENST00000424647 CNMDO75829 334 aa19.37■□□□□ 0.69
PPM1F-204ENST00000424647 FLOT1O75955 427 aa19.37■□□□□ 0.69
PPM1F-204ENST00000424647 CYP2B6P20813 491 aa19.37■□□□□ 0.69
PPM1F-204ENST00000424647 COG2Q14746 738 aa19.37■□□□□ 0.69
PPM1F-204ENST00000424647 PRPF38BQ5VTL8 546 aaKnown RBP19.37■□□□□ 0.69
PPM1F-204ENST00000424647 POTEEQ6S8J3 1075 aa19.37■□□□□ 0.69
PPM1F-204ENST00000424647 SIAH1Q8IUQ4 282 aa19.37■□□□□ 0.69
PPM1F-204ENST00000424647 HOXC10Q9NYD6 342 aa19.37■□□□□ 0.69
PPM1F-204ENST00000424647 IGHDP01880 384 aa19.36■□□□□ 0.69
PPM1F-204ENST00000424647 RGS2P41220 211 aa19.36■□□□□ 0.69
PPM1F-204ENST00000424647 GJA8P48165 433 aa19.36■□□□□ 0.69
PPM1F-204ENST00000424647 NUCB1Q02818 461 aa19.36■□□□□ 0.69
PPM1F-204ENST00000424647 PDE4BQ07343 736 aa19.36■□□□□ 0.69
PPM1F-204ENST00000424647 CCDC129Q6ZRS4 1044 aa19.36■□□□□ 0.69
PPM1F-204ENST00000424647 ZNF444Q8N0Y2 327 aaPredicted RBP19.36■□□□□ 0.69
PPM1F-204ENST00000424647 U2AF1L4Q8WU68 220 aaKnown RBP19.36■□□□□ 0.69
PPM1F-204ENST00000424647 SHISA4Q96DD7 197 aa19.36■□□□□ 0.69
PPM1F-204ENST00000424647 IVNS1ABPQ9Y6Y0 642 aa19.36■□□□□ 0.69
PPM1F-204ENST00000424647 PRDM1O75626 825 aa19.35■□□□□ 0.69
PPM1F-204ENST00000424647 ZKSCAN1P17029 563 aaPredicted RBP19.35■□□□□ 0.69
PPM1F-204ENST00000424647 PPARAQ07869 468 aa19.35■□□□□ 0.69
PPM1F-204ENST00000424647 KIAA1755Q5JYT7 1200 aa19.35■□□□□ 0.69
PPM1F-204ENST00000424647 SAMD1Q6SPF0 538 aaPredicted RBP19.35■□□□□ 0.69
PPM1F-204ENST00000424647 TRMT44Q8IYL2 757 aaKnown RBP19.35■□□□□ 0.69
PPM1F-204ENST00000424647 MB21D1Q8N884 522 aa19.35■□□□□ 0.69
PPM1F-204ENST00000424647 APBA2Q99767 749 aa19.35■□□□□ 0.69
PPM1F-204ENST00000424647 HELLSQ9NRZ9 838 aa19.35■□□□□ 0.69
PPM1F-204ENST00000424647 BTBD7Q9P203 1132 aa19.35■□□□□ 0.69
PPM1F-204ENST00000424647 XRCC5P13010 732 aaKnown RBP19.34■□□□□ 0.69
PPM1F-204ENST00000424647 TICAM2Q86XR7 235 aa19.34■□□□□ 0.69
PPM1F-204ENST00000424647 TRIB2Q92519 343 aa19.34■□□□□ 0.69
PPM1F-204ENST00000424647 RILPL2Q969X0 211 aa19.34■□□□□ 0.69
PPM1F-204ENST00000424647 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.34■□□□□ 0.69
PPM1F-204ENST00000424647 CENPFP49454 3210 aa19.33■□□□□ 0.69
PPM1F-204ENST00000424647 DSG3P32926 999 aa19.33■□□□□ 0.68
PPM1F-204ENST00000424647 MORN1Q5T089 497 aa19.33■□□□□ 0.68
PPM1F-204ENST00000424647 DEFB118Q96PH6 123 aa19.33■□□□□ 0.68
PPM1F-204ENST00000424647 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.33■□□□□ 0.68
PPM1F-204ENST00000424647 NYAP2Q9P242 653 aa19.33■□□□□ 0.68
PPM1F-204ENST00000424647 DOCK3Q8IZD9 2030 aa19.33■□□□□ 0.68
PPM1F-204ENST00000424647 SLC15A5A6NIM6 579 aa19.32■□□□□ 0.68
PPM1F-204ENST00000424647 SGPL1O95470 568 aa19.32■□□□□ 0.68
PPM1F-204ENST00000424647 TSPY3P0CV98 308 aa19.32■□□□□ 0.68
PPM1F-204ENST00000424647 TSPY8P0CW00 308 aa19.32■□□□□ 0.68
PPM1F-204ENST00000424647 CAPN2P17655 700 aa19.32■□□□□ 0.68
PPM1F-204ENST00000424647 MAP2K5Q13163 448 aa19.32■□□□□ 0.68
PPM1F-204ENST00000424647 PLS1Q14651 629 aa19.32■□□□□ 0.68
PPM1F-204ENST00000424647 PLEKHM2Q8IWE5 1019 aa19.32■□□□□ 0.68
PPM1F-204ENST00000424647 ATG4CQ96DT6 458 aa19.32■□□□□ 0.68
PPM1F-204ENST00000424647 FAM227BQ96M60 508 aa19.32■□□□□ 0.68
PPM1F-204ENST00000424647 SPATC1LQ9H0A9 340 aa19.32■□□□□ 0.68
PPM1F-204ENST00000424647 HMX1Q9NP08 348 aaPredicted RBP19.32■□□□□ 0.68
PPM1F-204ENST00000424647 PAK6Q9NQU5 681 aaPredicted RBP19.32■□□□□ 0.68
PPM1F-204ENST00000424647 PLIN4Q96Q06 1357 aa19.32■□□□□ 0.68
PPM1F-204ENST00000424647 RPTORQ8N122 1335 aa19.31■□□□□ 0.68
PPM1F-204ENST00000424647 A0A0D9SFI3 127 aa19.31■□□□□ 0.68
PPM1F-204ENST00000424647 FARP2O94887 1054 aaPredicted RBP19.31■□□□□ 0.68
PPM1F-204ENST00000424647 PTPREP23469 700 aa19.31■□□□□ 0.68
PPM1F-204ENST00000424647 MCMDC2Q4G0Z9 681 aa19.31■□□□□ 0.68
PPM1F-204ENST00000424647 FAM83BQ5T0W9 1011 aa19.31■□□□□ 0.68
PPM1F-204ENST00000424647 USP6NLQ92738 828 aa19.31■□□□□ 0.68
PPM1F-204ENST00000424647 MOV10L1Q9BXT6 1211 aaKnown RBP19.31■□□□□ 0.68
PPM1F-204ENST00000424647 OSBPL3Q9H4L5 887 aa19.31■□□□□ 0.68
PPM1F-204ENST00000424647 GREB1LQ9C091 1923 aaPredicted RBP19.31■□□□□ 0.68
PPM1F-204ENST00000424647 IGKV6D-41A0A0C4DH26 115 aa19.3■□□□□ 0.68
PPM1F-204ENST00000424647 TTLL1O95922 423 aa19.3■□□□□ 0.68
PPM1F-204ENST00000424647 TFRCP02786 760 aaKnown RBP19.3■□□□□ 0.68
PPM1F-204ENST00000424647 PRKAR2AP13861 404 aaKnown RBP19.3■□□□□ 0.68
PPM1F-204ENST00000424647 IRX6P78412 446 aaPredicted RBP19.3■□□□□ 0.68
PPM1F-204ENST00000424647 TRIM32Q13049 653 aa19.3■□□□□ 0.68
PPM1F-204ENST00000424647 NMIQ13287 307 aaPredicted RBP19.3■□□□□ 0.68
PPM1F-204ENST00000424647 VPS53Q5VIR6 699 aa19.3■□□□□ 0.68
PPM1F-204ENST00000424647 SHCBP1Q8NEM2 672 aa19.3■□□□□ 0.68
PPM1F-204ENST00000424647 CEP95Q96GE4 821 aa19.3■□□□□ 0.68
PPM1F-204ENST00000424647 CLIP2Q9UDT6 1046 aa19.3■□□□□ 0.68
PPM1F-204ENST00000424647 A0A0G2JMZ2 1700 aa19.3■□□□□ 0.68
PPM1F-204ENST00000424647 PLXNB2O15031 1838 aa19.3■□□□□ 0.68
PPM1F-204ENST00000424647 FOXP2O15409 715 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms