RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 VCPKMTQ9H867 229 aa21.56■■□□□ 1.04
UBXN11-208ENST00000421827 GJD2Q9UKL4 321 aa21.56■■□□□ 1.04
UBXN11-208ENST00000421827 TRIM6-TRIM34B2RNG4 842 aa21.55■■□□□ 1.04
UBXN11-208ENST00000421827 CNMDO75829 334 aa21.55■■□□□ 1.04
UBXN11-208ENST00000421827 EEF2P13639 858 aaKnown RBP21.55■■□□□ 1.04
UBXN11-208ENST00000421827 ELNP15502 786 aa21.55■■□□□ 1.04
UBXN11-208ENST00000421827 MAPK4P31152 587 aa21.55■■□□□ 1.04
UBXN11-208ENST00000421827 IRX6P78412 446 aaPredicted RBP21.55■■□□□ 1.04
UBXN11-208ENST00000421827 ATP2B2Q01814 1243 aa21.55■■□□□ 1.04
UBXN11-208ENST00000421827 KIAA1755Q5JYT7 1200 aa21.55■■□□□ 1.04
UBXN11-208ENST00000421827 CCDC129Q6ZRS4 1044 aa21.55■■□□□ 1.04
UBXN11-208ENST00000421827 CCAR1Q8IX12 1150 aaKnown RBP21.55■■□□□ 1.04
UBXN11-208ENST00000421827 ZNF287Q9HBT7 754 aa21.55■■□□□ 1.04
UBXN11-208ENST00000421827 HELLSQ9NRZ9 838 aa21.55■■□□□ 1.04
UBXN11-208ENST00000421827 SPDYE16A6NNV3 312 aaPredicted RBP21.54■■□□□ 1.04
UBXN11-208ENST00000421827 COG2Q14746 738 aa21.54■■□□□ 1.04
UBXN11-208ENST00000421827 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.54■■□□□ 1.04
UBXN11-208ENST00000421827 TANGO6Q9C0B7 1094 aa21.54■■□□□ 1.04
UBXN11-208ENST00000421827 PORCNQ9H237 461 aa21.54■■□□□ 1.04
UBXN11-208ENST00000421827 OSBPL3Q9H4L5 887 aa21.54■■□□□ 1.04
UBXN11-208ENST00000421827 CCL5P13501 91 aa21.53■■□□□ 1.04
UBXN11-208ENST00000421827 CCNA1P78396 465 aa21.53■■□□□ 1.04
UBXN11-208ENST00000421827 ZNF444Q8N0Y2 327 aaPredicted RBP21.53■■□□□ 1.04
UBXN11-208ENST00000421827 SPICE1Q8N0Z3 855 aa21.53■■□□□ 1.04
UBXN11-208ENST00000421827 RILPL2Q969X0 211 aa21.53■■□□□ 1.04
UBXN11-208ENST00000421827 HOXC10Q9NYD6 342 aa21.53■■□□□ 1.04
UBXN11-208ENST00000421827 FOXP2O15409 715 aa21.52■■□□□ 1.04
UBXN11-208ENST00000421827 PRDM1O75626 825 aa21.52■■□□□ 1.04
UBXN11-208ENST00000421827 INHAP05111 366 aa21.52■■□□□ 1.04
UBXN11-208ENST00000421827 SLC3A2P08195 630 aaKnown RBP21.52■■□□□ 1.04
UBXN11-208ENST00000421827 PPARAQ07869 468 aa21.52■■□□□ 1.04
UBXN11-208ENST00000421827 FAM227BQ96M60 508 aa21.52■■□□□ 1.04
UBXN11-208ENST00000421827 NUDT12Q9BQG2 462 aa21.52■■□□□ 1.04
UBXN11-208ENST00000421827 RNF208Q9H0X6 261 aa21.52■■□□□ 1.04
UBXN11-208ENST00000421827 GOPCQ9HD26 462 aa21.52■■□□□ 1.04
UBXN11-208ENST00000421827 BTBD7Q9P203 1132 aa21.52■■□□□ 1.04
UBXN11-208ENST00000421827 MKI67P46013 3256 aaKnown RBP21.52■■□□□ 1.04
UBXN11-208ENST00000421827 A0A0D9SFI3 127 aa21.51■■□□□ 1.03
UBXN11-208ENST00000421827 WDR46O15213 610 aaKnown RBP21.51■■□□□ 1.03
UBXN11-208ENST00000421827 PDE4BQ07343 736 aa21.51■■□□□ 1.03
UBXN11-208ENST00000421827 MCMDC2Q4G0Z9 681 aa21.51■■□□□ 1.03
UBXN11-208ENST00000421827 GPR142Q7Z601 462 aa21.51■■□□□ 1.03
UBXN11-208ENST00000421827 PLEKHH3Q7Z736 793 aa21.51■■□□□ 1.03
UBXN11-208ENST00000421827 SOCS4Q8WXH5 440 aa21.51■■□□□ 1.03
UBXN11-208ENST00000421827 CWC22Q9HCG8 908 aaKnown RBP21.51■■□□□ 1.03
UBXN11-208ENST00000421827 NYAP2Q9P242 653 aa21.51■■□□□ 1.03
UBXN11-208ENST00000421827 PDE4DIPQ5VU43 2346 aa21.51■■□□□ 1.03
UBXN11-208ENST00000421827 FLOT1O75955 427 aa21.5■■□□□ 1.03
UBXN11-208ENST00000421827 GJB1P08034 283 aa21.5■■□□□ 1.03
UBXN11-208ENST00000421827 DSG3P32926 999 aa21.5■■□□□ 1.03
UBXN11-208ENST00000421827 NMIQ13287 307 aaPredicted RBP21.5■■□□□ 1.03
UBXN11-208ENST00000421827 NKX2-3Q8TAU0 364 aa21.5■■□□□ 1.03
UBXN11-208ENST00000421827 UNC93B1Q9H1C4 597 aa21.5■■□□□ 1.03
UBXN11-208ENST00000421827 GREB1LQ9C091 1923 aaPredicted RBP21.5■■□□□ 1.03
UBXN11-208ENST00000421827 IGKV6D-41A0A0C4DH26 115 aa21.49■■□□□ 1.03
UBXN11-208ENST00000421827 HMGCRP04035 888 aa21.49■■□□□ 1.03
UBXN11-208ENST00000421827 CYP2B6P20813 491 aa21.49■■□□□ 1.03
UBXN11-208ENST00000421827 VPS53Q5VIR6 699 aa21.49■■□□□ 1.03
UBXN11-208ENST00000421827 PLXNB2O15031 1838 aa21.48■■□□□ 1.03
UBXN11-208ENST00000421827 RAD21O60216 631 aa21.48■■□□□ 1.03
UBXN11-208ENST00000421827 XRCC5P13010 732 aaKnown RBP21.48■■□□□ 1.03
UBXN11-208ENST00000421827 GJA8P48165 433 aa21.48■■□□□ 1.03
UBXN11-208ENST00000421827 ALX1Q15699 326 aa21.48■■□□□ 1.03
UBXN11-208ENST00000421827 MORN1Q5T089 497 aa21.48■■□□□ 1.03
UBXN11-208ENST00000421827 WDR78Q5VTH9 848 aa21.48■■□□□ 1.03
UBXN11-208ENST00000421827 MB21D1Q8N884 522 aa21.48■■□□□ 1.03
UBXN11-208ENST00000421827 USP6NLQ92738 828 aa21.48■■□□□ 1.03
UBXN11-208ENST00000421827 SDSP20132 328 aa21.47■■□□□ 1.03
UBXN11-208ENST00000421827 NEDD1Q8NHV4 660 aa21.47■■□□□ 1.03
UBXN11-208ENST00000421827 SHISA4Q96DD7 197 aa21.47■■□□□ 1.03
UBXN11-208ENST00000421827 ATG4CQ96DT6 458 aa21.47■■□□□ 1.03
UBXN11-208ENST00000421827 CLIP2Q9UDT6 1046 aa21.47■■□□□ 1.03
UBXN11-208ENST00000421827 RLFQ13129 1914 aa21.47■■□□□ 1.03
UBXN11-208ENST00000421827 TSPY3P0CV98 308 aa21.46■■□□□ 1.03
UBXN11-208ENST00000421827 TSPY8P0CW00 308 aa21.46■■□□□ 1.03
UBXN11-208ENST00000421827 RGS2P41220 211 aa21.46■■□□□ 1.03
UBXN11-208ENST00000421827 CTDSPL2Q05D32 466 aa21.46■■□□□ 1.03
UBXN11-208ENST00000421827 SAMD1Q6SPF0 538 aaPredicted RBP21.46■■□□□ 1.03
UBXN11-208ENST00000421827 ZNF589Q86UQ0 364 aaPredicted RBP21.46■■□□□ 1.03
UBXN11-208ENST00000421827 U2AF1L4Q8WU68 220 aaKnown RBP21.46■■□□□ 1.03
UBXN11-208ENST00000421827 TRIB2Q92519 343 aa21.46■■□□□ 1.03
UBXN11-208ENST00000421827 CEP95Q96GE4 821 aa21.46■■□□□ 1.03
UBXN11-208ENST00000421827 MOV10L1Q9BXT6 1211 aaKnown RBP21.46■■□□□ 1.03
UBXN11-208ENST00000421827 SPATC1LQ9H0A9 340 aa21.46■■□□□ 1.03
UBXN11-208ENST00000421827 MTMR4Q9NYA4 1195 aa21.46■■□□□ 1.03
UBXN11-208ENST00000421827 ANAPC4Q9UJX5 808 aa21.46■■□□□ 1.03
UBXN11-208ENST00000421827 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.46■■□□□ 1.03
UBXN11-208ENST00000421827 IVNS1ABPQ9Y6Y0 642 aa21.46■■□□□ 1.03
UBXN11-208ENST00000421827 PLIN4Q96Q06 1357 aa21.46■■□□□ 1.03
UBXN11-208ENST00000421827 SLC15A5A6NIM6 579 aa21.45■■□□□ 1.02
UBXN11-208ENST00000421827 F5H6K3 240 aa21.45■■□□□ 1.02
UBXN11-208ENST00000421827 TTLL1O95922 423 aa21.45■■□□□ 1.02
UBXN11-208ENST00000421827 HSPD1P10809 573 aaKnown RBP21.45■■□□□ 1.02
UBXN11-208ENST00000421827 PTPREP23469 700 aa21.45■■□□□ 1.02
UBXN11-208ENST00000421827 TFAP4Q01664 338 aa21.45■■□□□ 1.02
UBXN11-208ENST00000421827 KLRC3Q07444 240 aa21.45■■□□□ 1.02
UBXN11-208ENST00000421827 FAM47AQ5JRC9 791 aa21.45■■□□□ 1.02
UBXN11-208ENST00000421827 FAM83BQ5T0W9 1011 aa21.45■■□□□ 1.02
UBXN11-208ENST00000421827 TRMT44Q8IYL2 757 aaKnown RBP21.45■■□□□ 1.02
UBXN11-208ENST00000421827 MKL1Q969V6 931 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms