RNA–Protein interactions for RNA: ENST00000419601.1

NOD1-204, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-204ENST00000419601 EN2P19622 333 aaPredicted RBP18.98■□□□□ 0.63
NOD1-204ENST00000419601 MTFR1Q15390 333 aa18.98■□□□□ 0.63
NOD1-204ENST00000419601 POTEEQ6S8J3 1075 aa18.98■□□□□ 0.63
NOD1-204ENST00000419601 CCAR1Q8IX12 1150 aaKnown RBP18.98■□□□□ 0.63
NOD1-204ENST00000419601 TANGO6Q9C0B7 1094 aa18.98■□□□□ 0.63
NOD1-204ENST00000419601 NAPBQ9H115 298 aa18.98■□□□□ 0.63
NOD1-204ENST00000419601 HELLSQ9NRZ9 838 aa18.98■□□□□ 0.63
NOD1-204ENST00000419601 GREB1LQ9C091 1923 aaPredicted RBP18.98■□□□□ 0.63
NOD1-204ENST00000419601 MKI67P46013 3256 aaKnown RBP18.98■□□□□ 0.63
NOD1-204ENST00000419601 BRCA2P51587 3418 aa18.97■□□□□ 0.63
NOD1-204ENST00000419601 SPDYE16A6NNV3 312 aaPredicted RBP18.97■□□□□ 0.63
NOD1-204ENST00000419601 TRIM6-TRIM34B2RNG4 842 aa18.97■□□□□ 0.63
NOD1-204ENST00000419601 CCL5P13501 91 aa18.97■□□□□ 0.63
NOD1-204ENST00000419601 ELNP15502 786 aa18.97■□□□□ 0.63
NOD1-204ENST00000419601 CCNA1P78396 465 aa18.97■□□□□ 0.63
NOD1-204ENST00000419601 ATP2B2Q01814 1243 aa18.97■□□□□ 0.63
NOD1-204ENST00000419601 COG2Q14746 738 aa18.97■□□□□ 0.63
NOD1-204ENST00000419601 Q3C1V9 767 aa18.97■□□□□ 0.63
NOD1-204ENST00000419601 PLEKHM2Q8IWE5 1019 aa18.97■□□□□ 0.63
NOD1-204ENST00000419601 STK11IPQ8N1F8 1099 aa18.97■□□□□ 0.63
NOD1-204ENST00000419601 OSBPL3Q9H4L5 887 aa18.97■□□□□ 0.63
NOD1-204ENST00000419601 HOXC10Q9NYD6 342 aa18.97■□□□□ 0.63
NOD1-204ENST00000419601 GJD2Q9UKL4 321 aa18.97■□□□□ 0.63
NOD1-204ENST00000419601 CNMDO75829 334 aa18.96■□□□□ 0.63
NOD1-204ENST00000419601 INHAP05111 366 aa18.96■□□□□ 0.63
NOD1-204ENST00000419601 SLC3A2P08195 630 aaKnown RBP18.96■□□□□ 0.63
NOD1-204ENST00000419601 KIAA1755Q5JYT7 1200 aa18.96■□□□□ 0.63
NOD1-204ENST00000419601 CCDC129Q6ZRS4 1044 aa18.96■□□□□ 0.63
NOD1-204ENST00000419601 SPICE1Q8N0Z3 855 aa18.96■□□□□ 0.63
NOD1-204ENST00000419601 SOCS4Q8WXH5 440 aa18.96■□□□□ 0.63
NOD1-204ENST00000419601 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.96■□□□□ 0.63
NOD1-204ENST00000419601 PORCNQ9H237 461 aa18.96■□□□□ 0.63
NOD1-204ENST00000419601 GOPCQ9HD26 462 aa18.96■□□□□ 0.63
NOD1-204ENST00000419601 WDR46O15213 610 aaKnown RBP18.95■□□□□ 0.62
NOD1-204ENST00000419601 IRX6P78412 446 aaPredicted RBP18.95■□□□□ 0.62
NOD1-204ENST00000419601 PDE4BQ07343 736 aa18.95■□□□□ 0.62
NOD1-204ENST00000419601 ZNF444Q8N0Y2 327 aaPredicted RBP18.95■□□□□ 0.62
NOD1-204ENST00000419601 NKX2-3Q8TAU0 364 aa18.95■□□□□ 0.62
NOD1-204ENST00000419601 NUDT12Q9BQG2 462 aa18.95■□□□□ 0.62
NOD1-204ENST00000419601 RNF208Q9H0X6 261 aa18.95■□□□□ 0.62
NOD1-204ENST00000419601 CWC22Q9HCG8 908 aaKnown RBP18.95■□□□□ 0.62
NOD1-204ENST00000419601 PLXNB2O15031 1838 aa18.95■□□□□ 0.62
NOD1-204ENST00000419601 FOXP2O15409 715 aa18.94■□□□□ 0.62
NOD1-204ENST00000419601 GJB1P08034 283 aa18.94■□□□□ 0.62
NOD1-204ENST00000419601 PPARAQ07869 468 aa18.94■□□□□ 0.62
NOD1-204ENST00000419601 MCMDC2Q4G0Z9 681 aa18.94■□□□□ 0.62
NOD1-204ENST00000419601 GPR142Q7Z601 462 aa18.94■□□□□ 0.62
NOD1-204ENST00000419601 PLEKHH3Q7Z736 793 aa18.94■□□□□ 0.62
NOD1-204ENST00000419601 RILPL2Q969X0 211 aa18.94■□□□□ 0.62
NOD1-204ENST00000419601 FAM227BQ96M60 508 aa18.94■□□□□ 0.62
NOD1-204ENST00000419601 BTBD7Q9P203 1132 aa18.94■□□□□ 0.62
NOD1-204ENST00000419601 NYAP2Q9P242 653 aa18.94■□□□□ 0.62
NOD1-204ENST00000419601 A0A0D9SFI3 127 aa18.93■□□□□ 0.62
NOD1-204ENST00000419601 PRDM1O75626 825 aa18.93■□□□□ 0.62
NOD1-204ENST00000419601 FLOT1O75955 427 aa18.93■□□□□ 0.62
NOD1-204ENST00000419601 HMGCRP04035 888 aa18.93■□□□□ 0.62
NOD1-204ENST00000419601 MB21D1Q8N884 522 aa18.93■□□□□ 0.62
NOD1-204ENST00000419601 UNC93B1Q9H1C4 597 aa18.93■□□□□ 0.62
NOD1-204ENST00000419601 RLFQ13129 1914 aa18.93■□□□□ 0.62
NOD1-204ENST00000419601 A0A0G2JMZ2 1700 aa18.93■□□□□ 0.62
NOD1-204ENST00000419601 IGKV6D-41A0A0C4DH26 115 aa18.92■□□□□ 0.62
NOD1-204ENST00000419601 XRCC5P13010 732 aaKnown RBP18.92■□□□□ 0.62
NOD1-204ENST00000419601 CYP2B6P20813 491 aa18.92■□□□□ 0.62
NOD1-204ENST00000419601 DSG3P32926 999 aa18.92■□□□□ 0.62
NOD1-204ENST00000419601 GJA8P48165 433 aa18.92■□□□□ 0.62
NOD1-204ENST00000419601 NMIQ13287 307 aaPredicted RBP18.92■□□□□ 0.62
NOD1-204ENST00000419601 ALX1Q15699 326 aa18.92■□□□□ 0.62
NOD1-204ENST00000419601 MORN1Q5T089 497 aa18.92■□□□□ 0.62
NOD1-204ENST00000419601 USP6NLQ92738 828 aa18.92■□□□□ 0.62
NOD1-204ENST00000419601 RAD21O60216 631 aa18.91■□□□□ 0.62
NOD1-204ENST00000419601 TSPY3P0CV98 308 aa18.91■□□□□ 0.62
NOD1-204ENST00000419601 TSPY8P0CW00 308 aa18.91■□□□□ 0.62
NOD1-204ENST00000419601 RGS2P41220 211 aa18.91■□□□□ 0.62
NOD1-204ENST00000419601 VPS53Q5VIR6 699 aa18.91■□□□□ 0.62
NOD1-204ENST00000419601 WDR78Q5VTH9 848 aa18.91■□□□□ 0.62
NOD1-204ENST00000419601 TRMT44Q8IYL2 757 aaKnown RBP18.91■□□□□ 0.62
NOD1-204ENST00000419601 ANAPC4Q9UJX5 808 aa18.91■□□□□ 0.62
NOD1-204ENST00000419601 IVNS1ABPQ9Y6Y0 642 aa18.91■□□□□ 0.62
NOD1-204ENST00000419601 PLIN4Q96Q06 1357 aa18.91■□□□□ 0.62
NOD1-204ENST00000419601 PARP14Q460N5 1801 aa18.9■□□□□ 0.62
NOD1-204ENST00000419601 SDSP20132 328 aa18.9■□□□□ 0.62
NOD1-204ENST00000419601 MFAP1P55081 439 aaKnown RBP18.9■□□□□ 0.62
NOD1-204ENST00000419601 NEDD1Q8NHV4 660 aa18.9■□□□□ 0.62
NOD1-204ENST00000419601 U2AF1L4Q8WU68 220 aaKnown RBP18.9■□□□□ 0.62
NOD1-204ENST00000419601 TRIB2Q92519 343 aa18.9■□□□□ 0.62
NOD1-204ENST00000419601 SHISA4Q96DD7 197 aa18.9■□□□□ 0.62
NOD1-204ENST00000419601 ATG4CQ96DT6 458 aa18.9■□□□□ 0.62
NOD1-204ENST00000419601 CEP95Q96GE4 821 aa18.9■□□□□ 0.62
NOD1-204ENST00000419601 SPATC1LQ9H0A9 340 aa18.9■□□□□ 0.62
NOD1-204ENST00000419601 MTMR4Q9NYA4 1195 aa18.9■□□□□ 0.62
NOD1-204ENST00000419601 CLIP2Q9UDT6 1046 aa18.9■□□□□ 0.62
NOD1-204ENST00000419601 SYNPO2Q9UMS6 1093 aa18.9■□□□□ 0.62
NOD1-204ENST00000419601 MYH4Q9Y623 1939 aa18.9■□□□□ 0.62
NOD1-204ENST00000419601 SLC15A5A6NIM6 579 aa18.89■□□□□ 0.61
NOD1-204ENST00000419601 F5H6K3 240 aa18.89■□□□□ 0.61
NOD1-204ENST00000419601 TTLL1O95922 423 aa18.89■□□□□ 0.61
NOD1-204ENST00000419601 ZKSCAN1P17029 563 aaPredicted RBP18.89■□□□□ 0.61
NOD1-204ENST00000419601 CAPN2P17655 700 aa18.89■□□□□ 0.61
NOD1-204ENST00000419601 PTPREP23469 700 aa18.89■□□□□ 0.61
NOD1-204ENST00000419601 CTDSPL2Q05D32 466 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms