RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 VCPKMTQ9H867 229 aa18.66■□□□□ 0.58
ITGB1-204ENST00000417122 GREB1LQ9C091 1923 aaPredicted RBP18.66■□□□□ 0.58
ITGB1-204ENST00000417122 SPDYE16A6NNV3 312 aaPredicted RBP18.65■□□□□ 0.58
ITGB1-204ENST00000417122 TRIM6-TRIM34B2RNG4 842 aa18.65■□□□□ 0.58
ITGB1-204ENST00000417122 CNMDO75829 334 aa18.65■□□□□ 0.58
ITGB1-204ENST00000417122 CCL5P13501 91 aa18.65■□□□□ 0.58
ITGB1-204ENST00000417122 MAPK4P31152 587 aa18.65■□□□□ 0.58
ITGB1-204ENST00000417122 IRX6P78412 446 aaPredicted RBP18.65■□□□□ 0.58
ITGB1-204ENST00000417122 ATP2B2Q01814 1243 aa18.65■□□□□ 0.58
ITGB1-204ENST00000417122 COG2Q14746 738 aa18.65■□□□□ 0.58
ITGB1-204ENST00000417122 CCDC129Q6ZRS4 1044 aa18.65■□□□□ 0.58
ITGB1-204ENST00000417122 PLEKHM2Q8IWE5 1019 aa18.65■□□□□ 0.58
ITGB1-204ENST00000417122 TANGO6Q9C0B7 1094 aa18.65■□□□□ 0.58
ITGB1-204ENST00000417122 NAPBQ9H115 298 aa18.65■□□□□ 0.58
ITGB1-204ENST00000417122 PORCNQ9H237 461 aa18.65■□□□□ 0.58
ITGB1-204ENST00000417122 ZNF287Q9HBT7 754 aa18.65■□□□□ 0.58
ITGB1-204ENST00000417122 KIAA0100Q14667 2235 aaKnown RBP18.64■□□□□ 0.57
ITGB1-204ENST00000417122 INHAP05111 366 aa18.64■□□□□ 0.57
ITGB1-204ENST00000417122 TICAM2Q86XR7 235 aa18.64■□□□□ 0.57
ITGB1-204ENST00000417122 ZNF444Q8N0Y2 327 aaPredicted RBP18.64■□□□□ 0.57
ITGB1-204ENST00000417122 SPICE1Q8N0Z3 855 aa18.64■□□□□ 0.57
ITGB1-204ENST00000417122 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.64■□□□□ 0.57
ITGB1-204ENST00000417122 RNF208Q9H0X6 261 aa18.64■□□□□ 0.57
ITGB1-204ENST00000417122 OSBPL3Q9H4L5 887 aa18.64■□□□□ 0.57
ITGB1-204ENST00000417122 HELLSQ9NRZ9 838 aa18.64■□□□□ 0.57
ITGB1-204ENST00000417122 HOXC10Q9NYD6 342 aa18.64■□□□□ 0.57
ITGB1-204ENST00000417122 RLFQ13129 1914 aa18.63■□□□□ 0.57
ITGB1-204ENST00000417122 CCNA1P78396 465 aa18.63■□□□□ 0.57
ITGB1-204ENST00000417122 PPARAQ07869 468 aa18.63■□□□□ 0.57
ITGB1-204ENST00000417122 GPR142Q7Z601 462 aa18.63■□□□□ 0.57
ITGB1-204ENST00000417122 SOCS4Q8WXH5 440 aa18.63■□□□□ 0.57
ITGB1-204ENST00000417122 RILPL2Q969X0 211 aa18.63■□□□□ 0.57
ITGB1-204ENST00000417122 NUDT12Q9BQG2 462 aa18.63■□□□□ 0.57
ITGB1-204ENST00000417122 BTBD7Q9P203 1132 aa18.63■□□□□ 0.57
ITGB1-204ENST00000417122 TNRC18O15417 2968 aaPredicted RBP18.62■□□□□ 0.57
ITGB1-204ENST00000417122 WDR46O15213 610 aaKnown RBP18.62■□□□□ 0.57
ITGB1-204ENST00000417122 FOXP2O15409 715 aa18.62■□□□□ 0.57
ITGB1-204ENST00000417122 PRDM1O75626 825 aa18.62■□□□□ 0.57
ITGB1-204ENST00000417122 GJB1P08034 283 aa18.62■□□□□ 0.57
ITGB1-204ENST00000417122 SLC3A2P08195 630 aaKnown RBP18.62■□□□□ 0.57
ITGB1-204ENST00000417122 CYP2B6P20813 491 aa18.62■□□□□ 0.57
ITGB1-204ENST00000417122 PDE4BQ07343 736 aa18.62■□□□□ 0.57
ITGB1-204ENST00000417122 PLEKHH3Q7Z736 793 aa18.62■□□□□ 0.57
ITGB1-204ENST00000417122 NKX2-3Q8TAU0 364 aa18.62■□□□□ 0.57
ITGB1-204ENST00000417122 FAM227BQ96M60 508 aa18.62■□□□□ 0.57
ITGB1-204ENST00000417122 UNC93B1Q9H1C4 597 aa18.62■□□□□ 0.57
ITGB1-204ENST00000417122 CWC22Q9HCG8 908 aaKnown RBP18.62■□□□□ 0.57
ITGB1-204ENST00000417122 GOPCQ9HD26 462 aa18.62■□□□□ 0.57
ITGB1-204ENST00000417122 PARP14Q460N5 1801 aa18.61■□□□□ 0.57
ITGB1-204ENST00000417122 A0A0D9SFI3 127 aa18.61■□□□□ 0.57
ITGB1-204ENST00000417122 FLOT1O75955 427 aa18.61■□□□□ 0.57
ITGB1-204ENST00000417122 HMGCRP04035 888 aa18.61■□□□□ 0.57
ITGB1-204ENST00000417122 MCMDC2Q4G0Z9 681 aa18.61■□□□□ 0.57
ITGB1-204ENST00000417122 NYAP2Q9P242 653 aa18.61■□□□□ 0.57
ITGB1-204ENST00000417122 BRCA2P51587 3418 aa18.61■□□□□ 0.57
ITGB1-204ENST00000417122 MYH4Q9Y623 1939 aa18.61■□□□□ 0.57
ITGB1-204ENST00000417122 A0A0G2JMZ2 1700 aa18.6■□□□□ 0.57
ITGB1-204ENST00000417122 IGKV6D-41A0A0C4DH26 115 aa18.6■□□□□ 0.57
ITGB1-204ENST00000417122 RAD21O60216 631 aa18.6■□□□□ 0.57
ITGB1-204ENST00000417122 DSG3P32926 999 aa18.6■□□□□ 0.57
ITGB1-204ENST00000417122 GJA8P48165 433 aa18.6■□□□□ 0.57
ITGB1-204ENST00000417122 NMIQ13287 307 aaPredicted RBP18.6■□□□□ 0.57
ITGB1-204ENST00000417122 MORN1Q5T089 497 aa18.6■□□□□ 0.57
ITGB1-204ENST00000417122 VPS53Q5VIR6 699 aa18.6■□□□□ 0.57
ITGB1-204ENST00000417122 WDR78Q5VTH9 848 aa18.6■□□□□ 0.57
ITGB1-204ENST00000417122 SHISA4Q96DD7 197 aa18.6■□□□□ 0.57
ITGB1-204ENST00000417122 XRCC5P13010 732 aaKnown RBP18.59■□□□□ 0.57
ITGB1-204ENST00000417122 RGS2P41220 211 aa18.59■□□□□ 0.57
ITGB1-204ENST00000417122 MB21D1Q8N884 522 aa18.59■□□□□ 0.57
ITGB1-204ENST00000417122 USP6NLQ92738 828 aa18.59■□□□□ 0.57
ITGB1-204ENST00000417122 TSPY3P0CV98 308 aa18.58■□□□□ 0.56
ITGB1-204ENST00000417122 TSPY8P0CW00 308 aa18.58■□□□□ 0.56
ITGB1-204ENST00000417122 CTDSPL2Q05D32 466 aa18.58■□□□□ 0.56
ITGB1-204ENST00000417122 ALX1Q15699 326 aa18.58■□□□□ 0.56
ITGB1-204ENST00000417122 SAMD1Q6SPF0 538 aaPredicted RBP18.58■□□□□ 0.56
ITGB1-204ENST00000417122 U2AF1L4Q8WU68 220 aaKnown RBP18.58■□□□□ 0.56
ITGB1-204ENST00000417122 TRIB2Q92519 343 aa18.58■□□□□ 0.56
ITGB1-204ENST00000417122 ATG4CQ96DT6 458 aa18.58■□□□□ 0.56
ITGB1-204ENST00000417122 CEP95Q96GE4 821 aa18.58■□□□□ 0.56
ITGB1-204ENST00000417122 SPATC1LQ9H0A9 340 aa18.58■□□□□ 0.56
ITGB1-204ENST00000417122 CLIP2Q9UDT6 1046 aa18.58■□□□□ 0.56
ITGB1-204ENST00000417122 IVNS1ABPQ9Y6Y0 642 aa18.58■□□□□ 0.56
ITGB1-204ENST00000417122 PLIN4Q96Q06 1357 aa18.57■□□□□ 0.56
ITGB1-204ENST00000417122 F5H6K3 240 aa18.57■□□□□ 0.56
ITGB1-204ENST00000417122 SGPL1O95470 568 aa18.57■□□□□ 0.56
ITGB1-204ENST00000417122 SDSP20132 328 aa18.57■□□□□ 0.56
ITGB1-204ENST00000417122 PTPREP23469 700 aa18.57■□□□□ 0.56
ITGB1-204ENST00000417122 TFAP4Q01664 338 aa18.57■□□□□ 0.56
ITGB1-204ENST00000417122 KLRC3Q07444 240 aa18.57■□□□□ 0.56
ITGB1-204ENST00000417122 TRIM32Q13049 653 aa18.57■□□□□ 0.56
ITGB1-204ENST00000417122 MAP2K5Q13163 448 aa18.57■□□□□ 0.56
ITGB1-204ENST00000417122 FAM47AQ5JRC9 791 aa18.57■□□□□ 0.56
ITGB1-204ENST00000417122 FAM83BQ5T0W9 1011 aa18.57■□□□□ 0.56
ITGB1-204ENST00000417122 ZNF589Q86UQ0 364 aaPredicted RBP18.57■□□□□ 0.56
ITGB1-204ENST00000417122 TRMT44Q8IYL2 757 aaKnown RBP18.57■□□□□ 0.56
ITGB1-204ENST00000417122 NEDD1Q8NHV4 660 aa18.57■□□□□ 0.56
ITGB1-204ENST00000417122 APBA2Q99767 749 aa18.57■□□□□ 0.56
ITGB1-204ENST00000417122 MOV10L1Q9BXT6 1211 aaKnown RBP18.57■□□□□ 0.56
ITGB1-204ENST00000417122 PAK6Q9NQU5 681 aaPredicted RBP18.57■□□□□ 0.56
ITGB1-204ENST00000417122 FBXO28Q9NVF7 368 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms