RNA–Protein interactions for RNA: ENST00000415947.1

PARD3B-205, Transcript of par-3 family cell polarity regulator beta, humanhuman

TSL 1 (best)

Gene PARD3B, Length 1,668 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD3B-205ENST00000415947 FOXD4L6Q3SYB3 417 aaPredicted RBP26.7■■□□□ 1.86
PARD3B-205ENST00000415947 FOXD4L3Q6VB84 417 aaPredicted RBP26.7■■□□□ 1.86
PARD3B-205ENST00000415947 CLEC10AQ8IUN9 316 aa26.7■■□□□ 1.86
PARD3B-205ENST00000415947 STAG2Q8N3U4 1231 aa26.7■■□□□ 1.86
PARD3B-205ENST00000415947 TRPM4Q8TD43 1214 aa26.7■■□□□ 1.86
PARD3B-205ENST00000415947 MKL1Q969V6 931 aa26.7■■□□□ 1.86
PARD3B-205ENST00000415947 CNTNAP5Q8WYK1 1306 aa26.69■■□□□ 1.86
PARD3B-205ENST00000415947 OTUD7BQ6GQQ9 843 aa26.69■■□□□ 1.86
PARD3B-205ENST00000415947 LZTS2Q9BRK4 669 aa26.69■■□□□ 1.86
PARD3B-205ENST00000415947 GJB4Q9NTQ9 266 aa26.69■■□□□ 1.86
PARD3B-205ENST00000415947 V9GY48 417 aaPredicted RBP26.69■■□□□ 1.86
PARD3B-205ENST00000415947 GRIN3BO60391 1043 aa26.68■■□□□ 1.86
PARD3B-205ENST00000415947 GDF11O95390 407 aa26.68■■□□□ 1.86
PARD3B-205ENST00000415947 SEPT2Q15019 361 aa26.68■■□□□ 1.86
PARD3B-205ENST00000415947 SHROOM1Q2M3G4 852 aaPredicted RBP26.68■■□□□ 1.86
PARD3B-205ENST00000415947 CABP5Q9NP86 173 aa26.68■■□□□ 1.86
PARD3B-205ENST00000415947 PARP1P09874 1014 aaKnown RBP26.67■■□□□ 1.86
PARD3B-205ENST00000415947 SNHG28P0DPA3 235 aa26.67■■□□□ 1.86
PARD3B-205ENST00000415947 PKN1Q16512 942 aa26.67■■□□□ 1.86
PARD3B-205ENST00000415947 KRT40Q6A162 431 aa26.67■■□□□ 1.86
PARD3B-205ENST00000415947 LRRC47Q8N1G4 583 aaKnown RBP26.67■■□□□ 1.86
PARD3B-205ENST00000415947 DEFB129Q9H1M3 183 aa26.67■■□□□ 1.86
PARD3B-205ENST00000415947 RBM27Q9P2N5 1060 aaKnown RBP26.67■■□□□ 1.86
PARD3B-205ENST00000415947 MYH6P13533 1939 aa26.67■■□□□ 1.86
PARD3B-205ENST00000415947 GH2P01242 217 aa26.66■■□□□ 1.86
PARD3B-205ENST00000415947 PDHBP11177 359 aa26.66■■□□□ 1.86
PARD3B-205ENST00000415947 JAG1P78504 1218 aa26.66■■□□□ 1.86
PARD3B-205ENST00000415947 DNM1Q05193 864 aaKnown RBP26.66■■□□□ 1.86
PARD3B-205ENST00000415947 TRIM29Q14134 588 aa26.66■■□□□ 1.86
PARD3B-205ENST00000415947 APOBEC3FQ8IUX4 373 aaKnown RBP26.66■■□□□ 1.86
PARD3B-205ENST00000415947 SCAF8Q9UPN6 1271 aaKnown RBP26.66■■□□□ 1.86
PARD3B-205ENST00000415947 MYH4Q9Y623 1939 aa26.66■■□□□ 1.86
PARD3B-205ENST00000415947 EEF2P13639 858 aaKnown RBP26.66■■□□□ 1.86
PARD3B-205ENST00000415947 SMARCA1P28370 1054 aa26.66■■□□□ 1.86
PARD3B-205ENST00000415947 LMOD1P29536 600 aaPredicted RBP26.66■■□□□ 1.86
PARD3B-205ENST00000415947 HIRAP54198 1017 aaPredicted RBP26.66■■□□□ 1.86
PARD3B-205ENST00000415947 ANGEL2Q5VTE6 544 aaKnown RBP26.66■■□□□ 1.86
PARD3B-205ENST00000415947 MIGA2Q7L4E1 593 aa26.66■■□□□ 1.86
PARD3B-205ENST00000415947 SIAH1Q8IUQ4 282 aa26.66■■□□□ 1.86
PARD3B-205ENST00000415947 LMBRD1Q9NUN5 540 aa26.66■■□□□ 1.86
PARD3B-205ENST00000415947 MTMR7Q9Y216 660 aa26.66■■□□□ 1.86
PARD3B-205ENST00000415947 TCHHQ07283 1943 aa26.66■■□□□ 1.86
PARD3B-205ENST00000415947 USP17L5A8MUK1 530 aa26.65■■□□□ 1.86
PARD3B-205ENST00000415947 KLRF2D3W0D1 207 aa26.65■■□□□ 1.86
PARD3B-205ENST00000415947 ICA1Q05084 483 aa26.65■■□□□ 1.86
PARD3B-205ENST00000415947 DPY19L2Q6NUT2 758 aa26.65■■□□□ 1.86
PARD3B-205ENST00000415947 USP17L2Q6R6M4 530 aa26.65■■□□□ 1.86
PARD3B-205ENST00000415947 ATP2B2Q01814 1243 aa26.64■■□□□ 1.86
PARD3B-205ENST00000415947 FAM173BQ6P4H8 233 aa26.64■■□□□ 1.86
PARD3B-205ENST00000415947 ADARB2Q9NS39 739 aaKnown RBP26.64■■□□□ 1.86
PARD3B-205ENST00000415947 CNPY2Q9Y2B0 182 aa26.64■■□□□ 1.86
PARD3B-205ENST00000415947 ZC3H4Q9UPT8 1303 aaKnown RBP26.64■■□□□ 1.86
PARD3B-205ENST00000415947 GOLGA8HP0CJ92 632 aa26.63■■□□□ 1.85
PARD3B-205ENST00000415947 ASPRV1Q53RT3 343 aa26.63■■□□□ 1.85
PARD3B-205ENST00000415947 RASGRP2Q7LDG7 609 aa26.63■■□□□ 1.85
PARD3B-205ENST00000415947 SPZ1Q9BXG8 430 aa26.63■■□□□ 1.85
PARD3B-205ENST00000415947 UTRNP46939 3433 aa26.63■■□□□ 1.85
PARD3B-205ENST00000415947 PRPF40AO75400 957 aaKnown RBP26.63■■□□□ 1.85
PARD3B-205ENST00000415947 CAP2P40123 477 aa26.63■■□□□ 1.85
PARD3B-205ENST00000415947 KIF23Q02241 960 aaPredicted RBP26.63■■□□□ 1.85
PARD3B-205ENST00000415947 SLC35G1Q2M3R5 365 aa26.63■■□□□ 1.85
PARD3B-205ENST00000415947 TMEM87AQ8NBN3 555 aa26.63■■□□□ 1.85
PARD3B-205ENST00000415947 SYNPO2Q9UMS6 1093 aa26.63■■□□□ 1.85
PARD3B-205ENST00000415947 hCG_1642624A0A1W2PR95 340 aa26.62■■□□□ 1.85
PARD3B-205ENST00000415947 CYTH3O43739 400 aa26.62■■□□□ 1.85
PARD3B-205ENST00000415947 XBP1P17861 261 aa26.62■■□□□ 1.85
PARD3B-205ENST00000415947 KRT85P78386 507 aa26.62■■□□□ 1.85
PARD3B-205ENST00000415947 PFKFB3Q16875 520 aaPredicted RBP26.62■■□□□ 1.85
PARD3B-205ENST00000415947 L3MBTL3Q96JM7 780 aaPredicted RBP26.62■■□□□ 1.85
PARD3B-205ENST00000415947 GGA3Q9NZ52 723 aa26.62■■□□□ 1.85
PARD3B-205ENST00000415947 ZBTB21Q9ULJ3 1066 aa26.62■■□□□ 1.85
PARD3B-205ENST00000415947 MMP1P03956 469 aa26.61■■□□□ 1.85
PARD3B-205ENST00000415947 BRAPQ7Z569 592 aa26.61■■□□□ 1.85
PARD3B-205ENST00000415947 PPP2R3BQ9Y5P8 575 aa26.61■■□□□ 1.85
PARD3B-205ENST00000415947 PHF20L1A8MW92 1017 aa26.6■■□□□ 1.85
PARD3B-205ENST00000415947 TRAK2O60296 914 aa26.6■■□□□ 1.85
PARD3B-205ENST00000415947 SCG2P13521 617 aa26.6■■□□□ 1.85
PARD3B-205ENST00000415947 NCLP19338 710 aaKnown RBP26.6■■□□□ 1.85
PARD3B-205ENST00000415947 ZNF543Q08ER8 600 aa26.6■■□□□ 1.85
PARD3B-205ENST00000415947 SKOR2Q2VWA4 1001 aaPredicted RBP26.6■■□□□ 1.85
PARD3B-205ENST00000415947 ATL3Q6DD88 541 aa26.6■■□□□ 1.85
PARD3B-205ENST00000415947 PITPNM2Q9BZ72 1349 aa26.6■■□□□ 1.85
PARD3B-205ENST00000415947 U2AF2P26368 475 aaKnown RBP eCLIP26.6■■□□□ 1.854e-7■■■□□ 15.2
PARD3B-205ENST00000415947 GPATCH4Q5T3I0 446 aaKnown RBP26.6■■□□□ 1.85
PARD3B-205ENST00000415947 USP48Q86UV5 1035 aa26.6■■□□□ 1.85
PARD3B-205ENST00000415947 GMCL1P1Q8NEA9 526 aa26.6■■□□□ 1.85
PARD3B-205ENST00000415947 HOOK2Q96ED9 719 aa26.6■■□□□ 1.85
PARD3B-205ENST00000415947 GDPD2Q9HCC8 539 aa26.6■■□□□ 1.85
PARD3B-205ENST00000415947 BAZ2BQ9UIF8 2168 aaKnown RBP26.59■■□□□ 1.85
PARD3B-205ENST00000415947 KIF28PB7ZC32 967 aa26.59■■□□□ 1.85
PARD3B-205ENST00000415947 CSPP1Q1MSJ5 1256 aa26.59■■□□□ 1.85
PARD3B-205ENST00000415947 NBPF12Q5TAG4 269 aaPredicted RBP26.59■■□□□ 1.85
PARD3B-205ENST00000415947 RIOX1Q9H6W3 641 aa26.59■■□□□ 1.85
PARD3B-205ENST00000415947 SRCAPQ6ZRS2 3230 aa26.59■■□□□ 1.85
PARD3B-205ENST00000415947 MYH15Q9Y2K3 1946 aa26.58■■□□□ 1.85
PARD3B-205ENST00000415947 FRMPD2Q68DX3 1309 aaPredicted RBP26.58■■□□□ 1.85
PARD3B-205ENST00000415947 SAFBQ15424 915 aaKnown RBP eCLIP26.58■■□□□ 1.85
PARD3B-205ENST00000415947 DCAF4Q8WV16 495 aa26.58■■□□□ 1.85
PARD3B-205ENST00000415947 SHISA4Q96DD7 197 aa26.58■■□□□ 1.85
PARD3B-205ENST00000415947 PHF20Q9BVI0 1012 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms