RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 SOX1O00570 391 aaPredicted RBP15.03■□□□□ -0
NCKIPSD-203ENST00000415281 USP14P54578 494 aa15.03■□□□□ -0
NCKIPSD-203ENST00000415281 UBE3CQ15386 1083 aa15.03■□□□□ -0
NCKIPSD-203ENST00000415281 TRPV1Q8NER1 839 aa15.03■□□□□ -0
NCKIPSD-203ENST00000415281 SOCS4Q8WXH5 440 aa15.03■□□□□ -0
NCKIPSD-203ENST00000415281 CABP5Q9NP86 173 aa15.03■□□□□ -0
NCKIPSD-203ENST00000415281 ATP8A2Q9NTI2 1148 aa15.03■□□□□ -0
NCKIPSD-203ENST00000415281 LAMA2P24043 3122 aaKnown RBP15.02■□□□□ -0
NCKIPSD-203ENST00000415281 ZNF236Q9UL36 1845 aa15.02■□□□□ -0
NCKIPSD-203ENST00000415281 USP17L12C9JPN9 530 aa15.02■□□□□ -0
NCKIPSD-203ENST00000415281 USP17L21D6R901 530 aa15.02■□□□□ -0
NCKIPSD-203ENST00000415281 EVI5O60447 810 aa15.02■□□□□ -0
NCKIPSD-203ENST00000415281 HOXC6P09630 235 aa15.02■□□□□ -0
NCKIPSD-203ENST00000415281 CDK8P49336 464 aa15.02■□□□□ -0
NCKIPSD-203ENST00000415281 GRB14Q14449 540 aa15.02■□□□□ -0
NCKIPSD-203ENST00000415281 GTF3C2Q8WUA4 911 aaPredicted RBP15.02■□□□□ -0
NCKIPSD-203ENST00000415281 FEZ1Q99689 392 aa15.02■□□□□ -0
NCKIPSD-203ENST00000415281 GDF15Q99988 308 aa15.02■□□□□ -0
NCKIPSD-203ENST00000415281 DCTPP1Q9H773 170 aa15.02■□□□□ -0
NCKIPSD-203ENST00000415281 TMX2Q9Y320 296 aa15.02■□□□□ -0
NCKIPSD-203ENST00000415281 NR2E3Q9Y5X4 410 aa15.02■□□□□ -0
NCKIPSD-203ENST00000415281 SLC15A5A6NIM6 579 aa15.01□□□□□ -0.01
NCKIPSD-203ENST00000415281 RGS2P41220 211 aa15.01□□□□□ -0.01
NCKIPSD-203ENST00000415281 COG2Q14746 738 aa15.01□□□□□ -0.01
NCKIPSD-203ENST00000415281 CTR9Q6PD62 1173 aa15.01□□□□□ -0.01
NCKIPSD-203ENST00000415281 APBA2Q99767 749 aa15.01□□□□□ -0.01
NCKIPSD-203ENST00000415281 MOV10L1Q9BXT6 1211 aaKnown RBP15.01□□□□□ -0.01
NCKIPSD-203ENST00000415281 LRRCC1Q9C099 1032 aa15.01□□□□□ -0.01
NCKIPSD-203ENST00000415281 NBPF3Q9H094 633 aa15.01□□□□□ -0.01
NCKIPSD-203ENST00000415281 ADAMTS5Q9UNA0 930 aa15.01□□□□□ -0.01
NCKIPSD-203ENST00000415281 MPHOSPH10O00566 681 aaKnown RBP15□□□□□ -0.01
NCKIPSD-203ENST00000415281 ZKSCAN1P17029 563 aaPredicted RBP15□□□□□ -0.01
NCKIPSD-203ENST00000415281 DSG3P32926 999 aa15□□□□□ -0.01
NCKIPSD-203ENST00000415281 TSHZ3Q63HK5 1081 aa15□□□□□ -0.01
NCKIPSD-203ENST00000415281 TMEM179Q6ZVK1 233 aa15□□□□□ -0.01
NCKIPSD-203ENST00000415281 C16orf86Q6ZW13 317 aa15□□□□□ -0.01
NCKIPSD-203ENST00000415281 STRBPQ96SI9 672 aaKnown RBP15□□□□□ -0.01
NCKIPSD-203ENST00000415281 C11orf49Q9H6J7 331 aa15□□□□□ -0.01
NCKIPSD-203ENST00000415281 SWAP70Q9UH65 585 aa15□□□□□ -0.01
NCKIPSD-203ENST00000415281 GSG1L2A8MUP6 293 aa14.99□□□□□ -0.01
NCKIPSD-203ENST00000415281 COBLO75128 1261 aa14.99□□□□□ -0.01
NCKIPSD-203ENST00000415281 CYP2C19P33261 490 aa14.99□□□□□ -0.01
NCKIPSD-203ENST00000415281 TRMT44Q8IYL2 757 aaKnown RBP14.99□□□□□ -0.01
NCKIPSD-203ENST00000415281 C7orf61Q8IZ16 206 aa14.99□□□□□ -0.01
NCKIPSD-203ENST00000415281 OSBP2Q969R2 916 aa14.99□□□□□ -0.01
NCKIPSD-203ENST00000415281 PCDHB15Q9Y5E8 787 aa14.99□□□□□ -0.01
NCKIPSD-203ENST00000415281 EEF2P13639 858 aaKnown RBP14.98□□□□□ -0.01
NCKIPSD-203ENST00000415281 SYN1P17600 705 aa14.98□□□□□ -0.01
NCKIPSD-203ENST00000415281 BMP8BP34820 402 aa14.98□□□□□ -0.01
NCKIPSD-203ENST00000415281 LRRC26Q2I0M4 334 aa14.98□□□□□ -0.01
NCKIPSD-203ENST00000415281 SPICE1Q8N0Z3 855 aa14.98□□□□□ -0.01
NCKIPSD-203ENST00000415281 ATG4CQ96DT6 458 aa14.98□□□□□ -0.01
NCKIPSD-203ENST00000415281 LRCH3Q96II8 777 aa14.98□□□□□ -0.01
NCKIPSD-203ENST00000415281 SPATC1LQ9H0A9 340 aa14.98□□□□□ -0.01
NCKIPSD-203ENST00000415281 VCPKMTQ9H867 229 aa14.98□□□□□ -0.01
NCKIPSD-203ENST00000415281 ECHDC1Q9NTX5 307 aa14.98□□□□□ -0.01
NCKIPSD-203ENST00000415281 FBXO28Q9NVF7 368 aa14.98□□□□□ -0.01
NCKIPSD-203ENST00000415281 HOXC10Q9NYD6 342 aa14.98□□□□□ -0.01
NCKIPSD-203ENST00000415281 ZMYND8Q9ULU4 1186 aaPredicted RBP14.98□□□□□ -0.01
NCKIPSD-203ENST00000415281 SLC4A4Q9Y6R1 1079 aa14.98□□□□□ -0.01
NCKIPSD-203ENST00000415281 ERCC3P19447 782 aa14.97□□□□□ -0.01
NCKIPSD-203ENST00000415281 RRP1P56182 461 aaKnown RBP14.97□□□□□ -0.01
NCKIPSD-203ENST00000415281 CCNA1P78396 465 aa14.97□□□□□ -0.01
NCKIPSD-203ENST00000415281 TMEM132BQ14DG7 1078 aa14.97□□□□□ -0.01
NCKIPSD-203ENST00000415281 REPS2Q8NFH8 660 aa14.97□□□□□ -0.01
NCKIPSD-203ENST00000415281 OTUD7AQ8TE49 926 aaPredicted RBP14.97□□□□□ -0.01
NCKIPSD-203ENST00000415281 EPB41L4AQ9HCS5 686 aaPredicted RBP14.97□□□□□ -0.01
NCKIPSD-203ENST00000415281 SMCHD1A6NHR9 2005 aa14.97□□□□□ -0.01
NCKIPSD-203ENST00000415281 CYBAP13498 195 aa14.96□□□□□ -0.01
NCKIPSD-203ENST00000415281 RASA1P20936 1047 aa14.96□□□□□ -0.01
NCKIPSD-203ENST00000415281 ADORA2AP29274 412 aa14.96□□□□□ -0.01
NCKIPSD-203ENST00000415281 SBK1Q52WX2 424 aa14.96□□□□□ -0.01
NCKIPSD-203ENST00000415281 PRAMEF19Q5SWL8 479 aa14.96□□□□□ -0.01
NCKIPSD-203ENST00000415281 KBTBD3Q8NAB2 608 aa14.96□□□□□ -0.01
NCKIPSD-203ENST00000415281 SHCBP1Q8NEM2 672 aa14.96□□□□□ -0.01
NCKIPSD-203ENST00000415281 CCDC17Q96LX7 622 aa14.96□□□□□ -0.01
NCKIPSD-203ENST00000415281 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.96□□□□□ -0.015e-6■■■■■ 34.6
NCKIPSD-203ENST00000415281 PLXNA1Q9UIW2 1896 aa14.95□□□□□ -0.02
NCKIPSD-203ENST00000415281 IGKV6D-41A0A0C4DH26 115 aa14.95□□□□□ -0.02
NCKIPSD-203ENST00000415281 A0A1W2PPC1 479 aa14.95□□□□□ -0.02
NCKIPSD-203ENST00000415281 ICA1Q05084 483 aa14.95□□□□□ -0.02
NCKIPSD-203ENST00000415281 WDR78Q5VTH9 848 aa14.95□□□□□ -0.02
NCKIPSD-203ENST00000415281 CCAR1Q8IX12 1150 aaKnown RBP14.95□□□□□ -0.02
NCKIPSD-203ENST00000415281 PI4K2BQ8TCG2 481 aa14.95□□□□□ -0.02
NCKIPSD-203ENST00000415281 LPAR1Q92633 364 aa14.95□□□□□ -0.02
NCKIPSD-203ENST00000415281 SEC62Q99442 399 aaKnown RBP14.95□□□□□ -0.02
NCKIPSD-203ENST00000415281 TANGO6Q9C0B7 1094 aa14.95□□□□□ -0.02
NCKIPSD-203ENST00000415281 CHMP4BQ9H444 224 aaKnown RBP14.95□□□□□ -0.02
NCKIPSD-203ENST00000415281 DDX20Q9UHI6 824 aaKnown RBP14.95□□□□□ -0.02
NCKIPSD-203ENST00000415281 SALL3Q9BXA9 1300 aa14.94□□□□□ -0.02
NCKIPSD-203ENST00000415281 M0R2C6 588 aa14.94□□□□□ -0.02
NCKIPSD-203ENST00000415281 STRNO43815 780 aa14.94□□□□□ -0.02
NCKIPSD-203ENST00000415281 GLRX3O76003 335 aaKnown RBP14.94□□□□□ -0.02
NCKIPSD-203ENST00000415281 MAGEA10P43363 369 aaPredicted RBP14.94□□□□□ -0.02
NCKIPSD-203ENST00000415281 ATP2B2Q01814 1243 aa14.94□□□□□ -0.02
NCKIPSD-203ENST00000415281 OLFML2BQ68BL8 750 aa14.94□□□□□ -0.02
NCKIPSD-203ENST00000415281 ZNF214Q9UL59 606 aaPredicted RBP14.94□□□□□ -0.02
NCKIPSD-203ENST00000415281 WDR46O15213 610 aaKnown RBP14.93□□□□□ -0.02
NCKIPSD-203ENST00000415281 FOXP2O15409 715 aa14.93□□□□□ -0.02
NCKIPSD-203ENST00000415281 RNF113AO15541 343 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms