RNA–Protein interactions for RNA: ENST00000414543.5

TRIM27-203, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 1,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-203ENST00000414543 FAM83AQ86UY5 434 aa11.88□□□□□ -0.51
TRIM27-203ENST00000414543 GPT2Q8TD30 523 aa11.88□□□□□ -0.51
TRIM27-203ENST00000414543 SYT17Q9BSW7 474 aa11.88□□□□□ -0.51
TRIM27-203ENST00000414543 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.88□□□□□ -0.51
TRIM27-203ENST00000414543 MAD2L2Q9UI95 211 aa11.88□□□□□ -0.51
TRIM27-203ENST00000414543 CNOT7Q9UIV1 285 aaKnown RBP11.88□□□□□ -0.51
TRIM27-203ENST00000414543 MYH6P13533 1939 aa11.88□□□□□ -0.51
TRIM27-203ENST00000414543 SIPA1L1O43166 1804 aa11.88□□□□□ -0.51
TRIM27-203ENST00000414543 ELP1O95163 1332 aa11.88□□□□□ -0.51
TRIM27-203ENST00000414543 hCG_1642624A0A1W2PR95 340 aa11.88□□□□□ -0.51
TRIM27-203ENST00000414543 PALM3A6NDB9 673 aaPredicted RBP11.88□□□□□ -0.51
TRIM27-203ENST00000414543 MMP1P03956 469 aa11.88□□□□□ -0.51
TRIM27-203ENST00000414543 SLURP2P0DP57 97 aa11.88□□□□□ -0.51
TRIM27-203ENST00000414543 ATP2B2Q01814 1243 aa11.88□□□□□ -0.51
TRIM27-203ENST00000414543 PKN1Q16512 942 aa11.88□□□□□ -0.51
TRIM27-203ENST00000414543 MICALL2Q8IY33 904 aa11.88□□□□□ -0.51
TRIM27-203ENST00000414543 STAG2Q8N3U4 1231 aa11.88□□□□□ -0.51
TRIM27-203ENST00000414543 KANSL2Q9H9L4 492 aa11.88□□□□□ -0.51
TRIM27-203ENST00000414543 SHTN1A0MZ66 631 aa11.87□□□□□ -0.51
TRIM27-203ENST00000414543 GOLGA6L4A6NEF3 574 aa11.87□□□□□ -0.51
TRIM27-203ENST00000414543 KLRF2D3W0D1 207 aa11.87□□□□□ -0.51
TRIM27-203ENST00000414543 ABCB5Q2M3G0 1257 aa11.87□□□□□ -0.51
TRIM27-203ENST00000414543 TPRNQ4KMQ1 711 aa11.87□□□□□ -0.51
TRIM27-203ENST00000414543 TMEM179Q6ZVK1 233 aa11.87□□□□□ -0.51
TRIM27-203ENST00000414543 ILDR2Q71H61 639 aa11.87□□□□□ -0.51
TRIM27-203ENST00000414543 LEO1Q8WVC0 666 aaPredicted RBP11.87□□□□□ -0.51
TRIM27-203ENST00000414543 CABP5Q9NP86 173 aa11.87□□□□□ -0.51
TRIM27-203ENST00000414543 KCNJ14Q9UNX9 436 aa11.87□□□□□ -0.51
TRIM27-203ENST00000414543 MYH15Q9Y2K3 1946 aa11.87□□□□□ -0.51
TRIM27-203ENST00000414543 CNTNAP1P78357 1384 aa11.87□□□□□ -0.51
TRIM27-203ENST00000414543 ZNF541Q9H0D2 1346 aa11.87□□□□□ -0.51
TRIM27-203ENST00000414543 KIF28PB7ZC32 967 aa11.86□□□□□ -0.51
TRIM27-203ENST00000414543 H7C1D1 291 aa11.86□□□□□ -0.51
TRIM27-203ENST00000414543 SCG2P13521 617 aa11.86□□□□□ -0.51
TRIM27-203ENST00000414543 U2AF2P26368 475 aaKnown RBP eCLIP11.86□□□□□ -0.516e-13■■□□□ 12.8
TRIM27-203ENST00000414543 CEBPZQ03701 1054 aaKnown RBP11.86□□□□□ -0.51
TRIM27-203ENST00000414543 TNFAIP1Q13829 316 aa11.86□□□□□ -0.51
TRIM27-203ENST00000414543 MYSM1Q5VVJ2 828 aa11.86□□□□□ -0.51
TRIM27-203ENST00000414543 CAVIN1Q6NZI2 390 aaKnown RBP11.86□□□□□ -0.51
TRIM27-203ENST00000414543 CLEC10AQ8IUN9 316 aa11.86□□□□□ -0.51
TRIM27-203ENST00000414543 DIS3L2Q8IYB7 885 aaKnown RBP11.86□□□□□ -0.51
TRIM27-203ENST00000414543 LRRC47Q8N1G4 583 aaKnown RBP11.86□□□□□ -0.51
TRIM27-203ENST00000414543 PIBF1Q8WXW3 757 aa11.86□□□□□ -0.51
TRIM27-203ENST00000414543 TMEM39BQ9GZU3 492 aa11.86□□□□□ -0.51
TRIM27-203ENST00000414543 NYAP2Q9P242 653 aa11.86□□□□□ -0.51
TRIM27-203ENST00000414543 USP17L5A8MUK1 530 aa11.86□□□□□ -0.51
TRIM27-203ENST00000414543 GDF11O95390 407 aa11.86□□□□□ -0.51
TRIM27-203ENST00000414543 GOLGA8HP0CJ92 632 aa11.86□□□□□ -0.51
TRIM27-203ENST00000414543 PFKFB3Q16875 520 aaPredicted RBP11.86□□□□□ -0.51
TRIM27-203ENST00000414543 TBC1D10BQ4KMP7 808 aaPredicted RBP11.86□□□□□ -0.51
TRIM27-203ENST00000414543 ASPRV1Q53RT3 343 aa11.86□□□□□ -0.51
TRIM27-203ENST00000414543 USP17L2Q6R6M4 530 aa11.86□□□□□ -0.51
TRIM27-203ENST00000414543 SAMD7Q7Z3H4 446 aa11.86□□□□□ -0.51
TRIM27-203ENST00000414543 SYAP1Q96A49 352 aaPredicted RBP11.86□□□□□ -0.51
TRIM27-203ENST00000414543 USP28Q96RU2 1077 aa11.86□□□□□ -0.51
TRIM27-203ENST00000414543 FOXP1Q9H334 677 aaPredicted RBP11.86□□□□□ -0.51
TRIM27-203ENST00000414543 BRMS1Q9HCU9 246 aa11.86□□□□□ -0.51
TRIM27-203ENST00000414543 VPS54Q9P1Q0 977 aa11.86□□□□□ -0.51
TRIM27-203ENST00000414543 GREB1LQ9C091 1923 aaPredicted RBP11.85□□□□□ -0.51
TRIM27-203ENST00000414543 BTBD18B2RXH4 712 aa11.85□□□□□ -0.51
TRIM27-203ENST00000414543 PDHBP11177 359 aa11.85□□□□□ -0.51
TRIM27-203ENST00000414543 EEF2P13639 858 aaKnown RBP11.85□□□□□ -0.51
TRIM27-203ENST00000414543 SMARCA1P28370 1054 aa11.85□□□□□ -0.51
TRIM27-203ENST00000414543 SEPT2Q15019 361 aa11.85□□□□□ -0.51
TRIM27-203ENST00000414543 KIF4BQ2VIQ3 1234 aa11.85□□□□□ -0.51
TRIM27-203ENST00000414543 NOSTRINQ8IVI9 506 aa11.85□□□□□ -0.51
TRIM27-203ENST00000414543 GPC2Q8N158 579 aa11.85□□□□□ -0.51
TRIM27-203ENST00000414543 PHF20Q9BVI0 1012 aa11.85□□□□□ -0.51
TRIM27-203ENST00000414543 SPZ1Q9BXG8 430 aa11.85□□□□□ -0.51
TRIM27-203ENST00000414543 RTEL1Q9NZ71 1219 aa11.85□□□□□ -0.51
TRIM27-203ENST00000414543 RCOR1Q9UKL0 485 aa11.85□□□□□ -0.51
TRIM27-203ENST00000414543 TBC1D12O60347 775 aa11.84□□□□□ -0.51
TRIM27-203ENST00000414543 EGFRP00533 1210 aa11.84□□□□□ -0.51
TRIM27-203ENST00000414543 GH2P01242 217 aa11.84□□□□□ -0.51
TRIM27-203ENST00000414543 KRT2P35908 639 aa11.84□□□□□ -0.51
TRIM27-203ENST00000414543 NLRP5P59047 1200 aa11.84□□□□□ -0.51
TRIM27-203ENST00000414543 ICA1Q05084 483 aa11.84□□□□□ -0.51
TRIM27-203ENST00000414543 RASA3Q14644 834 aa11.84□□□□□ -0.51
TRIM27-203ENST00000414543 MKL1Q969V6 931 aa11.84□□□□□ -0.51
TRIM27-203ENST00000414543 DICER1Q9UPY3 1922 aaKnown RBP11.84□□□□□ -0.51
TRIM27-203ENST00000414543 MYH4Q9Y623 1939 aa11.84□□□□□ -0.51
TRIM27-203ENST00000414543 CYTH3O43739 400 aa11.83□□□□□ -0.51
TRIM27-203ENST00000414543 SNHG28P0DPA3 235 aa11.83□□□□□ -0.51
TRIM27-203ENST00000414543 STK38Q15208 465 aa11.83□□□□□ -0.51
TRIM27-203ENST00000414543 SF3A1Q15459 793 aaKnown RBP11.83□□□□□ -0.51
TRIM27-203ENST00000414543 GPATCH4Q5T3I0 446 aaKnown RBP11.83□□□□□ -0.51
TRIM27-203ENST00000414543 RASGRP2Q7LDG7 609 aa11.83□□□□□ -0.51
TRIM27-203ENST00000414543 RRP36Q96EU6 259 aaKnown RBP11.83□□□□□ -0.51
TRIM27-203ENST00000414543 FTOQ9C0B1 505 aaKnown RBP eCLIP11.83□□□□□ -0.51
TRIM27-203ENST00000414543 SH3GLB2Q9NR46 395 aa11.83□□□□□ -0.51
TRIM27-203ENST00000414543 POLR3EQ9NVU0 708 aa11.83□□□□□ -0.51
TRIM27-203ENST00000414543 SEC63Q9UGP8 760 aaKnown RBP11.83□□□□□ -0.51
TRIM27-203ENST00000414543 FRMPD2Q68DX3 1309 aaPredicted RBP11.83□□□□□ -0.52
TRIM27-203ENST00000414543 RAD21O60216 631 aa11.83□□□□□ -0.52
TRIM27-203ENST00000414543 YEATS4O95619 227 aa11.83□□□□□ -0.52
TRIM27-203ENST00000414543 CALML3P27482 149 aa11.83□□□□□ -0.52
TRIM27-203ENST00000414543 ZNF543Q08ER8 600 aa11.83□□□□□ -0.52
TRIM27-203ENST00000414543 CCDC96Q2M329 555 aa11.83□□□□□ -0.52
TRIM27-203ENST00000414543 SHROOM1Q2M3G4 852 aaPredicted RBP11.83□□□□□ -0.52
TRIM27-203ENST00000414543 ANO1Q5XXA6 986 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms