RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 SYNPO2Q9UMS6 1093 aa12.91□□□□□ -0.34
CHMP3-205ENST00000409810 IGKV6D-41A0A0C4DH26 115 aa12.9□□□□□ -0.34
CHMP3-205ENST00000409810 A0A1W2PRG0 241 aa12.9□□□□□ -0.34
CHMP3-205ENST00000409810 WDR46O15213 610 aaKnown RBP12.9□□□□□ -0.34
CHMP3-205ENST00000409810 CDC45O75419 566 aa12.9□□□□□ -0.34
CHMP3-205ENST00000409810 GNRH1P01148 92 aa12.9□□□□□ -0.34
CHMP3-205ENST00000409810 BCRP11274 1271 aa12.9□□□□□ -0.34
CHMP3-205ENST00000409810 LACTBP83111 547 aaPredicted RBP12.9□□□□□ -0.34
CHMP3-205ENST00000409810 FAM110CQ1W6H9 321 aa12.9□□□□□ -0.34
CHMP3-205ENST00000409810 FAM47AQ5JRC9 791 aa12.9□□□□□ -0.34
CHMP3-205ENST00000409810 CD99L2Q8TCZ2 262 aa12.9□□□□□ -0.34
CHMP3-205ENST00000409810 CEP95Q96GE4 821 aa12.9□□□□□ -0.34
CHMP3-205ENST00000409810 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.9□□□□□ -0.34
CHMP3-205ENST00000409810 IL25Q9H293 177 aa12.9□□□□□ -0.34
CHMP3-205ENST00000409810 RPAP3Q9H6T3 665 aaPredicted RBP12.9□□□□□ -0.34
CHMP3-205ENST00000409810 MTMR4Q9NYA4 1195 aa12.9□□□□□ -0.34
CHMP3-205ENST00000409810 U3KPZ7 1027 aaPredicted RBP12.9□□□□□ -0.34
CHMP3-205ENST00000409810 RAD21O60216 631 aa12.89□□□□□ -0.35
CHMP3-205ENST00000409810 HERVK_113P62684 666 aa12.89□□□□□ -0.35
CHMP3-205ENST00000409810 CATSPERGQ6ZRH7 1159 aa12.89□□□□□ -0.35
CHMP3-205ENST00000409810 TBC1D10CQ8IV04 446 aa12.89□□□□□ -0.35
CHMP3-205ENST00000409810 ANKRD13CQ8N6S4 541 aa12.89□□□□□ -0.35
CHMP3-205ENST00000409810 ESR2Q92731 530 aa12.89□□□□□ -0.35
CHMP3-205ENST00000409810 ESYT1Q9BSJ8 1104 aa12.89□□□□□ -0.35
CHMP3-205ENST00000409810 TANGO6Q9C0B7 1094 aa12.89□□□□□ -0.35
CHMP3-205ENST00000409810 CNNM2Q9H8M5 875 aa12.89□□□□□ -0.35
CHMP3-205ENST00000409810 EFCC1Q9HA90 598 aa12.89□□□□□ -0.35
CHMP3-205ENST00000409810 TRIM17Q9Y577 477 aa12.89□□□□□ -0.35
CHMP3-205ENST00000409810 DOCK3Q8IZD9 2030 aa12.89□□□□□ -0.35
CHMP3-205ENST00000409810 HOXD10P28358 340 aa12.88□□□□□ -0.35
CHMP3-205ENST00000409810 FCGRTP55899 365 aa12.88□□□□□ -0.35
CHMP3-205ENST00000409810 SIAH1Q8IUQ4 282 aa12.88□□□□□ -0.35
CHMP3-205ENST00000409810 SPICE1Q8N0Z3 855 aa12.88□□□□□ -0.35
CHMP3-205ENST00000409810 MKL1Q969V6 931 aa12.88□□□□□ -0.35
CHMP3-205ENST00000409810 P2RX7Q99572 595 aaKnown RBP12.88□□□□□ -0.35
CHMP3-205ENST00000409810 KRT23Q9C075 422 aa12.88□□□□□ -0.35
CHMP3-205ENST00000409810 MCOLN1Q9GZU1 580 aa12.88□□□□□ -0.35
CHMP3-205ENST00000409810 HOXC10Q9NYD6 342 aa12.88□□□□□ -0.35
CHMP3-205ENST00000409810 CLIP2Q9UDT6 1046 aa12.88□□□□□ -0.35
CHMP3-205ENST00000409810 STX8Q9UNK0 236 aa12.88□□□□□ -0.35
CHMP3-205ENST00000409810 RLFQ13129 1914 aa12.88□□□□□ -0.35
CHMP3-205ENST00000409810 ZSWIM8A7E2V4 1837 aa12.88□□□□□ -0.35
CHMP3-205ENST00000409810 FLOT1O75955 427 aa12.87□□□□□ -0.35
CHMP3-205ENST00000409810 PSMC4P43686 418 aa12.87□□□□□ -0.35
CHMP3-205ENST00000409810 PRMT2P55345 433 aa12.87□□□□□ -0.35
CHMP3-205ENST00000409810 TRDNQ13061 729 aa12.87□□□□□ -0.35
CHMP3-205ENST00000409810 COG2Q14746 738 aa12.87□□□□□ -0.35
CHMP3-205ENST00000409810 CCDC178Q5BJE1 867 aa12.87□□□□□ -0.35
CHMP3-205ENST00000409810 FBXO46Q6PJ61 603 aaPredicted RBP12.87□□□□□ -0.35
CHMP3-205ENST00000409810 LBX2Q6XYB7 198 aa12.87□□□□□ -0.35
CHMP3-205ENST00000409810 OTOP1Q7RTM1 612 aa12.87□□□□□ -0.35
CHMP3-205ENST00000409810 IQCA1Q86XH1 822 aa12.87□□□□□ -0.35
CHMP3-205ENST00000409810 GMCL1P1Q8NEA9 526 aa12.87□□□□□ -0.35
CHMP3-205ENST00000409810 NBPF3Q9H094 633 aa12.87□□□□□ -0.35
CHMP3-205ENST00000409810 INCENPQ9NQS7 918 aa12.87□□□□□ -0.35
CHMP3-205ENST00000409810 TCP11L1Q9NUJ3 509 aa12.87□□□□□ -0.35
CHMP3-205ENST00000409810 MORF4L1Q9UBU8 362 aa12.87□□□□□ -0.35
CHMP3-205ENST00000409810 A0A0G2JMZ2 1700 aa12.87□□□□□ -0.35
CHMP3-205ENST00000409810 NEDD4P46934 1319 aa12.87□□□□□ -0.35
CHMP3-205ENST00000409810 MYPNQ86TC9 1320 aa12.87□□□□□ -0.35
CHMP3-205ENST00000409810 COL11A1P12107 1806 aaPredicted RBP12.86□□□□□ -0.35
CHMP3-205ENST00000409810 F5H6K3 240 aa12.86□□□□□ -0.35
CHMP3-205ENST00000409810 FMNL1O95466 1100 aaPredicted RBP12.86□□□□□ -0.35
CHMP3-205ENST00000409810 CCNA1P78396 465 aa12.86□□□□□ -0.35
CHMP3-205ENST00000409810 PTH1RQ03431 593 aa12.86□□□□□ -0.35
CHMP3-205ENST00000409810 KLRC3Q07444 240 aa12.86□□□□□ -0.35
CHMP3-205ENST00000409810 CCAR1Q8IX12 1150 aaKnown RBP12.86□□□□□ -0.35
CHMP3-205ENST00000409810 LRRC47Q8N1G4 583 aaKnown RBP12.86□□□□□ -0.35
CHMP3-205ENST00000409810 GPRC5AQ8NFJ5 357 aa12.86□□□□□ -0.35
CHMP3-205ENST00000409810 MAP4K1Q92918 833 aa12.86□□□□□ -0.35
CHMP3-205ENST00000409810 PAGR1Q9BTK6 254 aa12.86□□□□□ -0.35
CHMP3-205ENST00000409810 ANO2Q9NQ90 1003 aa12.86□□□□□ -0.35
CHMP3-205ENST00000409810 RABGAP1Q9Y3P9 1069 aa12.86□□□□□ -0.35
CHMP3-205ENST00000409810 TACC3Q9Y6A5 838 aa12.86□□□□□ -0.35
CHMP3-205ENST00000409810 SPDYE16A6NNV3 312 aaPredicted RBP12.85□□□□□ -0.35
CHMP3-205ENST00000409810 NDUFB10O96000 172 aa12.85□□□□□ -0.35
CHMP3-205ENST00000409810 ERVK-9P63128 1117 aa12.85□□□□□ -0.35
CHMP3-205ENST00000409810 ERVK-24P63145 666 aa12.85□□□□□ -0.35
CHMP3-205ENST00000409810 KIAA1755Q5JYT7 1200 aa12.85□□□□□ -0.35
CHMP3-205ENST00000409810 FAM83BQ5T0W9 1011 aa12.85□□□□□ -0.35
CHMP3-205ENST00000409810 MB21D1Q8N884 522 aa12.85□□□□□ -0.35
CHMP3-205ENST00000409810 COA7Q96BR5 231 aa12.85□□□□□ -0.35
CHMP3-205ENST00000409810 TTC14Q96N46 770 aa12.85□□□□□ -0.35
CHMP3-205ENST00000409810 LSG1Q9H089 658 aaKnown RBP12.85□□□□□ -0.35
CHMP3-205ENST00000409810 IL17RBQ9NRM6 502 aa12.85□□□□□ -0.35
CHMP3-205ENST00000409810 RBM8AQ9Y5S9 174 aaKnown RBP12.85□□□□□ -0.35
CHMP3-205ENST00000409810 B4E1Z4 1266 aa12.84□□□□□ -0.35
CHMP3-205ENST00000409810 TNPO2O14787 897 aaKnown RBP12.84□□□□□ -0.35
CHMP3-205ENST00000409810 NMT2O60551 498 aa12.84□□□□□ -0.35
CHMP3-205ENST00000409810 KDM4AO75164 1064 aa12.84□□□□□ -0.35
CHMP3-205ENST00000409810 CYP21A2P08686 494 aa12.84□□□□□ -0.35
CHMP3-205ENST00000409810 TOP1P11387 765 aaKnown RBP12.84□□□□□ -0.35
CHMP3-205ENST00000409810 DSG3P32926 999 aa12.84□□□□□ -0.35
CHMP3-205ENST00000409810 NOVP48745 357 aa12.84□□□□□ -0.35
CHMP3-205ENST00000409810 RNF20Q5VTR2 975 aa12.84□□□□□ -0.35
CHMP3-205ENST00000409810 SLFN13Q68D06 897 aa12.84□□□□□ -0.35
CHMP3-205ENST00000409810 RALYLQ86SE5 291 aaKnown RBP12.84□□□□□ -0.35
CHMP3-205ENST00000409810 TRIM47Q96LD4 638 aa12.84□□□□□ -0.35
CHMP3-205ENST00000409810 UBAC1Q9BSL1 405 aa12.84□□□□□ -0.35
CHMP3-205ENST00000409810 ARHGAP39Q9C0H5 1083 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms