RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 PLCD1P51178 756 aa15.38■□□□□ 0.05
CHRNA1-205ENST00000409542 CCNA1P78396 465 aa15.38■□□□□ 0.05
CHRNA1-205ENST00000409542 ATP8B2P98198 1209 aa15.38■□□□□ 0.05
CHRNA1-205ENST00000409542 ATP2B2Q01814 1243 aa15.38■□□□□ 0.05
CHRNA1-205ENST00000409542 CERKLQ49MI3 558 aaPredicted RBP15.38■□□□□ 0.05
CHRNA1-205ENST00000409542 LBX2Q6XYB7 198 aa15.38■□□□□ 0.05
CHRNA1-205ENST00000409542 RPAP3Q9H6T3 665 aaPredicted RBP15.38■□□□□ 0.05
CHRNA1-205ENST00000409542 ANTXR1Q9H6X2 564 aa15.38■□□□□ 0.05
CHRNA1-205ENST00000409542 SERPINB13Q9UIV8 391 aa15.38■□□□□ 0.05
CHRNA1-205ENST00000409542 PCDHB15Q9Y5E8 787 aa15.38■□□□□ 0.05
CHRNA1-205ENST00000409542 RLFQ13129 1914 aa15.37■□□□□ 0.05
CHRNA1-205ENST00000409542 IPO8O15397 1037 aaKnown RBP15.37■□□□□ 0.05
CHRNA1-205ENST00000409542 SURF6O75683 361 aaKnown RBP15.37■□□□□ 0.05
CHRNA1-205ENST00000409542 IDH1O75874 414 aaKnown RBP15.37■□□□□ 0.05
CHRNA1-205ENST00000409542 GLRX3O76003 335 aaKnown RBP15.37■□□□□ 0.05
CHRNA1-205ENST00000409542 CYBAP13498 195 aa15.37■□□□□ 0.05
CHRNA1-205ENST00000409542 OS9Q13438 667 aaPredicted RBP15.37■□□□□ 0.05
CHRNA1-205ENST00000409542 SHHQ15465 462 aa15.37■□□□□ 0.05
CHRNA1-205ENST00000409542 ABCB5Q2M3G0 1257 aa15.37■□□□□ 0.05
CHRNA1-205ENST00000409542 C9orf50Q5SZB4 431 aa15.37■□□□□ 0.05
CHRNA1-205ENST00000409542 MAGEB6Q8N7X4 407 aa15.37■□□□□ 0.05
CHRNA1-205ENST00000409542 EAF2Q96CJ1 260 aaPredicted RBP15.37■□□□□ 0.05
CHRNA1-205ENST00000409542 LBHD1Q9BQE6 289 aaPredicted RBP15.37■□□□□ 0.05
CHRNA1-205ENST00000409542 A0A1W2PRG0 241 aa15.36■□□□□ 0.05
CHRNA1-205ENST00000409542 DNM1LO00429 736 aa15.36■□□□□ 0.05
CHRNA1-205ENST00000409542 USP14P54578 494 aa15.36■□□□□ 0.05
CHRNA1-205ENST00000409542 EHD4Q9H223 541 aa15.36■□□□□ 0.05
CHRNA1-205ENST00000409542 DDX19BQ9UMR2 479 aa15.36■□□□□ 0.05
CHRNA1-205ENST00000409542 ATP11BQ9Y2G3 1177 aa15.36■□□□□ 0.05
CHRNA1-205ENST00000409542 SPTBN5Q9NRC6 3674 aaKnown RBP15.35■□□□□ 0.05
CHRNA1-205ENST00000409542 COBLO75128 1261 aa15.35■□□□□ 0.05
CHRNA1-205ENST00000409542 SEPT2Q15019 361 aa15.35■□□□□ 0.05
CHRNA1-205ENST00000409542 KIAA1755Q5JYT7 1200 aa15.35■□□□□ 0.05
CHRNA1-205ENST00000409542 PRAMEF19Q5SWL8 479 aa15.35■□□□□ 0.05
CHRNA1-205ENST00000409542 SLC39A5Q6ZMH5 540 aa15.35■□□□□ 0.05
CHRNA1-205ENST00000409542 SH3RF1Q7Z6J0 888 aa15.35■□□□□ 0.05
CHRNA1-205ENST00000409542 MOV10L1Q9BXT6 1211 aaKnown RBP15.35■□□□□ 0.05
CHRNA1-205ENST00000409542 IVNS1ABPQ9Y6Y0 642 aa15.35■□□□□ 0.05
CHRNA1-205ENST00000409542 MSCO60682 206 aa15.34■□□□□ 0.05
CHRNA1-205ENST00000409542 ADORA2AP29274 412 aa15.34■□□□□ 0.05
CHRNA1-205ENST00000409542 ZNF697Q5TEC3 545 aa15.34■□□□□ 0.05
CHRNA1-205ENST00000409542 CDX2Q99626 313 aaPredicted RBP15.34■□□□□ 0.05
CHRNA1-205ENST00000409542 CDH23Q9H251 3354 aa15.34■□□□□ 0.05
CHRNA1-205ENST00000409542 GABPAQ06546 454 aa15.33■□□□□ 0.05
CHRNA1-205ENST00000409542 HDAC1Q13547 482 aaPredicted RBP15.33■□□□□ 0.05
CHRNA1-205ENST00000409542 DPP9Q86TI2 863 aa15.33■□□□□ 0.05
CHRNA1-205ENST00000409542 TTC6Q86TZ1 520 aa15.33■□□□□ 0.05
CHRNA1-205ENST00000409542 BADQ92934 168 aa15.33■□□□□ 0.05
CHRNA1-205ENST00000409542 RIOK1Q9BRS2 568 aaKnown RBP15.33■□□□□ 0.05
CHRNA1-205ENST00000409542 SEMA6BQ9H3T3 888 aa15.33■□□□□ 0.05
CHRNA1-205ENST00000409542 CABP5Q9NP86 173 aa15.33■□□□□ 0.05
CHRNA1-205ENST00000409542 TRIM43BA6NCK2 446 aa15.33■□□□□ 0.04
CHRNA1-205ENST00000409542 IGSF3O75054 1194 aa15.33■□□□□ 0.04
CHRNA1-205ENST00000409542 TRIM60Q495X7 471 aa15.33■□□□□ 0.04
CHRNA1-205ENST00000409542 OLFML2BQ68BL8 750 aa15.33■□□□□ 0.04
CHRNA1-205ENST00000409542 FERMT2Q96AC1 680 aa15.33■□□□□ 0.04
CHRNA1-205ENST00000409542 TRIM43Q96BQ3 446 aaPredicted RBP15.33■□□□□ 0.04
CHRNA1-205ENST00000409542 TTYH1Q9H313 450 aaPredicted RBP15.33■□□□□ 0.04
CHRNA1-205ENST00000409542 PRKAG2Q9UGJ0 569 aa15.33■□□□□ 0.04
CHRNA1-205ENST00000409542 MYCNP04198 464 aaPredicted RBP15.32■□□□□ 0.04
CHRNA1-205ENST00000409542 ERCC3P19447 782 aa15.32■□□□□ 0.04
CHRNA1-205ENST00000409542 ITGB8P26012 769 aa15.32■□□□□ 0.04
CHRNA1-205ENST00000409542 COG2Q14746 738 aa15.32■□□□□ 0.04
CHRNA1-205ENST00000409542 MYLIPQ8WY64 445 aa15.32■□□□□ 0.04
CHRNA1-205ENST00000409542 SPATC1LQ9H0A9 340 aa15.32■□□□□ 0.04
CHRNA1-205ENST00000409542 PRDM5Q9NQX1 630 aaPredicted RBP15.32■□□□□ 0.04
CHRNA1-205ENST00000409542 PDLIM7Q9NR12 457 aa15.32■□□□□ 0.04
CHRNA1-205ENST00000409542 ZNF236Q9UL36 1845 aa15.31■□□□□ 0.04
CHRNA1-205ENST00000409542 SMCHD1A6NHR9 2005 aa15.31■□□□□ 0.04
CHRNA1-205ENST00000409542 SEPT4O43236 478 aa15.31■□□□□ 0.04
CHRNA1-205ENST00000409542 CYP2D6P10635 497 aa15.31■□□□□ 0.04
CHRNA1-205ENST00000409542 ADCYAP1R1P41586 468 aa15.31■□□□□ 0.04
CHRNA1-205ENST00000409542 SNX17Q15036 470 aa15.31■□□□□ 0.04
CHRNA1-205ENST00000409542 LRRC41Q15345 812 aa15.31■□□□□ 0.04
CHRNA1-205ENST00000409542 CLEC10AQ8IUN9 316 aa15.31■□□□□ 0.04
CHRNA1-205ENST00000409542 SIAH1Q8IUQ4 282 aa15.31■□□□□ 0.04
CHRNA1-205ENST00000409542 SLC44A5Q8NCS7 719 aa15.31■□□□□ 0.04
CHRNA1-205ENST00000409542 ARRDC4Q8NCT1 418 aa15.31■□□□□ 0.04
CHRNA1-205ENST00000409542 A0A0G2JMZ2 1700 aa15.3■□□□□ 0.04
CHRNA1-205ENST00000409542 NAV1Q8NEY1 1877 aa15.3■□□□□ 0.04
CHRNA1-205ENST00000409542 STRNO43815 780 aa15.3■□□□□ 0.04
CHRNA1-205ENST00000409542 POLR3DP05423 398 aaPredicted RBP15.3■□□□□ 0.04
CHRNA1-205ENST00000409542 MAP3K12Q12852 859 aa15.3■□□□□ 0.04
CHRNA1-205ENST00000409542 FAM47AQ5JRC9 791 aa15.3■□□□□ 0.04
CHRNA1-205ENST00000409542 ITPRIPQ8IWB1 547 aa15.3■□□□□ 0.04
CHRNA1-205ENST00000409542 TANGO6Q9C0B7 1094 aa15.3■□□□□ 0.04
CHRNA1-205ENST00000409542 HOXC10Q9NYD6 342 aa15.3■□□□□ 0.04
CHRNA1-205ENST00000409542 ZNFX1Q9P2E3 1918 aaKnown RBP15.3■□□□□ 0.04
CHRNA1-205ENST00000409542 KBTBD13C9JR72 458 aa15.29■□□□□ 0.04
CHRNA1-205ENST00000409542 SMIM22K7EJ46 135 aa15.29■□□□□ 0.04
CHRNA1-205ENST00000409542 MPHOSPH10O00566 681 aaKnown RBP15.29■□□□□ 0.04
CHRNA1-205ENST00000409542 DSG3P32926 999 aa15.29■□□□□ 0.04
CHRNA1-205ENST00000409542 EPHB4P54760 987 aa15.29■□□□□ 0.04
CHRNA1-205ENST00000409542 SHCBP1Q8NEM2 672 aa15.29■□□□□ 0.04
CHRNA1-205ENST00000409542 MAFAQ8NHW3 353 aaPredicted RBP15.29■□□□□ 0.04
CHRNA1-205ENST00000409542 SDR42E1Q8WUS8 393 aa15.29■□□□□ 0.04
CHRNA1-205ENST00000409542 ATG4CQ96DT6 458 aa15.29■□□□□ 0.04
CHRNA1-205ENST00000409542 DYNLL2Q96FJ2 89 aa15.29■□□□□ 0.04
CHRNA1-205ENST00000409542 CHMP4BQ9H444 224 aaKnown RBP15.29■□□□□ 0.04
CHRNA1-205ENST00000409542 ZBTB40Q9NUA8 1239 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms