RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 CYBAP13498 195 aa7.58□□□□□ -1.2
RPA3-204ENST00000406109 PTPREP23469 700 aa7.58□□□□□ -1.2
RPA3-204ENST00000406109 CYP2C19P33261 490 aa7.58□□□□□ -1.2
RPA3-204ENST00000406109 GSTO1P78417 241 aa7.58□□□□□ -1.2
RPA3-204ENST00000406109 SMAD3P84022 425 aaKnown RBP7.58□□□□□ -1.2
RPA3-204ENST00000406109 ATP8B2P98198 1209 aa7.58□□□□□ -1.2
RPA3-204ENST00000406109 MVPQ14764 893 aaKnown RBP7.58□□□□□ -1.2
RPA3-204ENST00000406109 GJC2Q5T442 439 aaPredicted RBP7.58□□□□□ -1.2
RPA3-204ENST00000406109 LBX2Q6XYB7 198 aa7.58□□□□□ -1.2
RPA3-204ENST00000406109 SLC39A5Q6ZMH5 540 aa7.58□□□□□ -1.2
RPA3-204ENST00000406109 CATSPERGQ6ZRH7 1159 aa7.58□□□□□ -1.2
RPA3-204ENST00000406109 SH3RF1Q7Z6J0 888 aa7.58□□□□□ -1.2
RPA3-204ENST00000406109 FOXP4Q8IVH2 680 aaPredicted RBP7.58□□□□□ -1.2
RPA3-204ENST00000406109 MAPKAPK5Q8IW41 473 aa7.58□□□□□ -1.2
RPA3-204ENST00000406109 USP38Q8NB14 1042 aa7.58□□□□□ -1.2
RPA3-204ENST00000406109 GTF3C2Q8WUA4 911 aaPredicted RBP7.58□□□□□ -1.2
RPA3-204ENST00000406109 TGFBRAP1Q8WUH2 860 aa7.58□□□□□ -1.2
RPA3-204ENST00000406109 BADQ92934 168 aa7.58□□□□□ -1.2
RPA3-204ENST00000406109 C12orf42Q96LP6 360 aa7.58□□□□□ -1.2
RPA3-204ENST00000406109 DHX36Q9H2U1 1008 aaKnown RBP7.58□□□□□ -1.2
RPA3-204ENST00000406109 GINM1Q9NU53 330 aa7.58□□□□□ -1.2
RPA3-204ENST00000406109 AATFQ9NY61 560 aaKnown RBP eCLIP7.58□□□□□ -1.2
RPA3-204ENST00000406109 RAI14Q9P0K7 980 aa7.58□□□□□ -1.2
RPA3-204ENST00000406109 BTBD7Q9P203 1132 aa7.58□□□□□ -1.2
RPA3-204ENST00000406109 DDX19BQ9UMR2 479 aa7.58□□□□□ -1.2
RPA3-204ENST00000406109 AKAP2Q9Y2D5 859 aa7.58□□□□□ -1.2
RPA3-204ENST00000406109 BRWD1Q9NSI6 2320 aa7.58□□□□□ -1.2
RPA3-204ENST00000406109 MYO15AQ9UKN7 3530 aa7.58□□□□□ -1.2
RPA3-204ENST00000406109 MYH1P12882 1939 aa7.57□□□□□ -1.2
RPA3-204ENST00000406109 PNMA6EA0A0J9YXQ4 647 aa7.57□□□□□ -1.2
RPA3-204ENST00000406109 ST18O60284 1047 aa7.57□□□□□ -1.2
RPA3-204ENST00000406109 MSCO60682 206 aa7.57□□□□□ -1.2
RPA3-204ENST00000406109 GH2P01242 217 aa7.57□□□□□ -1.2
RPA3-204ENST00000406109 EPHB4P54760 987 aa7.57□□□□□ -1.2
RPA3-204ENST00000406109 G3BP1Q13283 466 aaKnown RBP eCLIP7.57□□□□□ -1.2
RPA3-204ENST00000406109 MTX1Q13505 466 aa7.57□□□□□ -1.2
RPA3-204ENST00000406109 C1orf53Q5VUE5 145 aa7.57□□□□□ -1.2
RPA3-204ENST00000406109 MFSD14CQ5VZR4 134 aa7.57□□□□□ -1.2
RPA3-204ENST00000406109 TATDN1Q6P1N9 297 aa7.57□□□□□ -1.2
RPA3-204ENST00000406109 USP17L2Q6R6M4 530 aa7.57□□□□□ -1.2
RPA3-204ENST00000406109 ACER1Q8TDN7 264 aa7.57□□□□□ -1.2
RPA3-204ENST00000406109 NEUROD6Q96NK8 337 aa7.57□□□□□ -1.2
RPA3-204ENST00000406109 CHMP4BQ9H444 224 aaKnown RBP7.57□□□□□ -1.2
RPA3-204ENST00000406109 PDLIM7Q9NR12 457 aa7.57□□□□□ -1.2
RPA3-204ENST00000406109 RAPGEFL1Q9UHV5 662 aa7.57□□□□□ -1.2
RPA3-204ENST00000406109 ATP11BQ9Y2G3 1177 aa7.57□□□□□ -1.2
RPA3-204ENST00000406109 MUC6Q6W4X9 2439 aa7.57□□□□□ -1.2
RPA3-204ENST00000406109 SPDYE16A6NNV3 312 aaPredicted RBP7.56□□□□□ -1.2
RPA3-204ENST00000406109 USP17L15C9J2P7 530 aa7.56□□□□□ -1.2
RPA3-204ENST00000406109 USP17L13C9JLJ4 530 aa7.56□□□□□ -1.2
RPA3-204ENST00000406109 USP17L11C9JVI0 530 aa7.56□□□□□ -1.2
RPA3-204ENST00000406109 USP17L18D6R9N7 530 aa7.56□□□□□ -1.2
RPA3-204ENST00000406109 USP17L22D6RA61 530 aa7.56□□□□□ -1.2
RPA3-204ENST00000406109 USP17L17D6RBQ6 530 aa7.56□□□□□ -1.2
RPA3-204ENST00000406109 USP17L19D6RCP7 530 aa7.56□□□□□ -1.2
RPA3-204ENST00000406109 USP17L20D6RJB6 530 aa7.56□□□□□ -1.2
RPA3-204ENST00000406109 COBLO75128 1261 aa7.56□□□□□ -1.2
RPA3-204ENST00000406109 SURF6O75683 361 aaKnown RBP7.56□□□□□ -1.2
RPA3-204ENST00000406109 CYP2E1P05181 493 aaPredicted RBP7.56□□□□□ -1.2
RPA3-204ENST00000406109 FOSL2P15408 326 aa7.56□□□□□ -1.2
RPA3-204ENST00000406109 VCAM1P19320 739 aa7.56□□□□□ -1.2
RPA3-204ENST00000406109 COL9A1P20849 921 aa7.56□□□□□ -1.2
RPA3-204ENST00000406109 CNGA1P29973 690 aa7.56□□□□□ -1.2
RPA3-204ENST00000406109 GUCY1A2P33402 732 aa7.56□□□□□ -1.2
RPA3-204ENST00000406109 RRP1P56182 461 aaKnown RBP7.56□□□□□ -1.2
RPA3-204ENST00000406109 ATP2B2Q01814 1243 aa7.56□□□□□ -1.2
RPA3-204ENST00000406109 USP17L24Q0WX57 530 aa7.56□□□□□ -1.2
RPA3-204ENST00000406109 OS9Q13438 667 aaPredicted RBP7.56□□□□□ -1.2
RPA3-204ENST00000406109 GRIN2CQ14957 1233 aa7.56□□□□□ -1.2
RPA3-204ENST00000406109 TRIM60Q495X7 471 aa7.56□□□□□ -1.2
RPA3-204ENST00000406109 ANO1Q5XXA6 986 aa7.56□□□□□ -1.2
RPA3-204ENST00000406109 CCAR1Q8IX12 1150 aaKnown RBP7.56□□□□□ -1.2
RPA3-204ENST00000406109 OCEL1Q9H607 264 aa7.56□□□□□ -1.2
RPA3-204ENST00000406109 ZBTB40Q9NUA8 1239 aa7.56□□□□□ -1.2
RPA3-204ENST00000406109 LRP2BPQ9P2M1 347 aa7.56□□□□□ -1.2
RPA3-204ENST00000406109 SAP30BPQ9UHR5 308 aaKnown RBP7.56□□□□□ -1.2
RPA3-204ENST00000406109 SUPT16HQ9Y5B9 1047 aaKnown RBP7.56□□□□□ -1.2
RPA3-204ENST00000406109 VPS13AQ96RL7 3174 aa7.56□□□□□ -1.2
RPA3-204ENST00000406109 ADORA2AP29274 412 aa7.55□□□□□ -1.2
RPA3-204ENST00000406109 ADCYAP1R1P41586 468 aa7.55□□□□□ -1.2
RPA3-204ENST00000406109 DYNLL1P63167 89 aaKnown RBP7.55□□□□□ -1.2
RPA3-204ENST00000406109 CCNA1P78396 465 aa7.55□□□□□ -1.2
RPA3-204ENST00000406109 LRRC41Q15345 812 aa7.55□□□□□ -1.2
RPA3-204ENST00000406109 ZYXQ15942 572 aaKnown RBP7.55□□□□□ -1.2
RPA3-204ENST00000406109 PRAMEF19Q5SWL8 479 aa7.55□□□□□ -1.2
RPA3-204ENST00000406109 OLFML2BQ68BL8 750 aa7.55□□□□□ -1.2
RPA3-204ENST00000406109 NAA16Q6N069 864 aaPredicted RBP7.55□□□□□ -1.2
RPA3-204ENST00000406109 CEP85Q6P2H3 762 aa7.55□□□□□ -1.2
RPA3-204ENST00000406109 ARRDC4Q8NCT1 418 aa7.55□□□□□ -1.2
RPA3-204ENST00000406109 KIAA1683Q9H0B3 1180 aa7.55□□□□□ -1.2
RPA3-204ENST00000406109 PRDM5Q9NQX1 630 aaPredicted RBP7.55□□□□□ -1.2
RPA3-204ENST00000406109 SNRKQ9NRH2 765 aa7.55□□□□□ -1.2
RPA3-204ENST00000406109 PRKAG2Q9UGJ0 569 aa7.55□□□□□ -1.2
RPA3-204ENST00000406109 PRRC2BQ5JSZ5 2229 aaKnown RBP7.55□□□□□ -1.2
RPA3-204ENST00000406109 ZNF236Q9UL36 1845 aa7.55□□□□□ -1.2
RPA3-204ENST00000406109 TMEM265A0A087WTH1 108 aa7.54□□□□□ -1.2
RPA3-204ENST00000406109 A0A1W2PRG0 241 aa7.54□□□□□ -1.2
RPA3-204ENST00000406109 TNFRSF10AO00220 468 aa7.54□□□□□ -1.2
RPA3-204ENST00000406109 SEPT4O43236 478 aa7.54□□□□□ -1.2
RPA3-204ENST00000406109 GLRX3O76003 335 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms