RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 DCP1AQ9NPI6 582 aaPredicted RBP15.24■□□□□ 0.03
SIRPA-203ENST00000400068 NWD1Q149M9 1564 aa15.23■□□□□ 0.03
SIRPA-203ENST00000400068 SMCO2A6NFE2 343 aa15.23■□□□□ 0.03
SIRPA-203ENST00000400068 ERICH4A6NGS2 130 aa15.23■□□□□ 0.03
SIRPA-203ENST00000400068 PSMA7O14818 248 aa15.23■□□□□ 0.03
SIRPA-203ENST00000400068 CTR9Q6PD62 1173 aa15.23■□□□□ 0.03
SIRPA-203ENST00000400068 STAG1Q8WVM7 1258 aa15.23■□□□□ 0.03
SIRPA-203ENST00000400068 DBNDD1Q9H9R9 158 aa15.23■□□□□ 0.03
SIRPA-203ENST00000400068 SAMSN1Q9NSI8 373 aaKnown RBP15.23■□□□□ 0.03
SIRPA-203ENST00000400068 TBC1D7Q9P0N9 293 aa15.23■□□□□ 0.03
SIRPA-203ENST00000400068 THRAP3Q9Y2W1 955 aaKnown RBP15.23■□□□□ 0.03
SIRPA-203ENST00000400068 U2AF2P26368 475 aaKnown RBP eCLIP15.23■□□□□ 0.03
SIRPA-203ENST00000400068 FKBP15Q5T1M5 1219 aa15.23■□□□□ 0.03
SIRPA-203ENST00000400068 SHC4Q6S5L8 630 aa15.23■□□□□ 0.03
SIRPA-203ENST00000400068 ADGRA1Q86SQ6 560 aa15.23■□□□□ 0.03
SIRPA-203ENST00000400068 TXNRD3Q86VQ6 643 aa15.23■□□□□ 0.03
SIRPA-203ENST00000400068 FEZ1Q99689 392 aa15.23■□□□□ 0.03
SIRPA-203ENST00000400068 PUF60Q9UHX1 559 aaKnown RBP15.23■□□□□ 0.03
SIRPA-203ENST00000400068 SETD1AO15047 1707 aaKnown RBP15.23■□□□□ 0.03
SIRPA-203ENST00000400068 GRIN1Q05586 938 aa15.23■□□□□ 0.03
SIRPA-203ENST00000400068 CCDC40Q4G0X9 1142 aa15.23■□□□□ 0.03
SIRPA-203ENST00000400068 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.23■□□□□ 0.03
SIRPA-203ENST00000400068 FCHSD1Q86WN1 690 aa15.23■□□□□ 0.03
SIRPA-203ENST00000400068 ATP8A2Q9NTI2 1148 aa15.23■□□□□ 0.03
SIRPA-203ENST00000400068 MLKLQ8NB16 471 aa15.22■□□□□ 0.03
SIRPA-203ENST00000400068 RNF26Q9BY78 433 aaPredicted RBP15.22■□□□□ 0.03
SIRPA-203ENST00000400068 SEPT11Q9NVA2 429 aaKnown RBP15.22■□□□□ 0.03
SIRPA-203ENST00000400068 NALCNQ8IZF0 1738 aa15.22■□□□□ 0.03
SIRPA-203ENST00000400068 FAM196BA6NMK8 535 aa15.22■□□□□ 0.03
SIRPA-203ENST00000400068 GNA11P29992 359 aa15.22■□□□□ 0.03
SIRPA-203ENST00000400068 TECP42680 631 aa15.22■□□□□ 0.03
SIRPA-203ENST00000400068 PDE4DQ08499 809 aa15.22■□□□□ 0.03
SIRPA-203ENST00000400068 USH1GQ495M9 461 aa15.22■□□□□ 0.03
SIRPA-203ENST00000400068 XDHP47989 1333 aa15.22■□□□□ 0.03
SIRPA-203ENST00000400068 SLC16A2P36021 539 aa15.22■□□□□ 0.03
SIRPA-203ENST00000400068 PIK3R5Q8WYR1 880 aa15.22■□□□□ 0.03
SIRPA-203ENST00000400068 MRFAP1L1Q96HT8 127 aa15.22■□□□□ 0.03
SIRPA-203ENST00000400068 PRR29P0C7W0 189 aa15.22■□□□□ 0.03
SIRPA-203ENST00000400068 NAA30Q147X3 362 aaPredicted RBP15.22■□□□□ 0.03
SIRPA-203ENST00000400068 CCDC70Q6NSX1 233 aa15.22■□□□□ 0.03
SIRPA-203ENST00000400068 TMCO3Q6UWJ1 677 aa15.22■□□□□ 0.03
SIRPA-203ENST00000400068 FOXP1Q9H334 677 aaPredicted RBP15.22■□□□□ 0.03
SIRPA-203ENST00000400068 KCNF1Q9H3M0 494 aa15.22■□□□□ 0.03
SIRPA-203ENST00000400068 PKD2L1Q9P0L9 805 aa15.22■□□□□ 0.03
SIRPA-203ENST00000400068 GUCA1BQ9UMX6 200 aa15.22■□□□□ 0.03
SIRPA-203ENST00000400068 VIRMAQ69YN4 1812 aaKnown RBP15.21■□□□□ 0.03
SIRPA-203ENST00000400068 SLU7O95391 586 aaKnown RBP15.21■□□□□ 0.03
SIRPA-203ENST00000400068 MATR3P43243 847 aaKnown RBP eCLIP15.21■□□□□ 0.03
SIRPA-203ENST00000400068 RBM6P78332 1123 aaKnown RBP15.21■□□□□ 0.03
SIRPA-203ENST00000400068 ELF2Q15723 593 aa15.21■□□□□ 0.03
SIRPA-203ENST00000400068 RMND1Q9NWS8 449 aa15.21■□□□□ 0.03
SIRPA-203ENST00000400068 WWC2Q6AWC2 1192 aa15.21■□□□□ 0.03
SIRPA-203ENST00000400068 PPP6R2O75170 966 aa15.21■□□□□ 0.02
SIRPA-203ENST00000400068 AMPD3Q01432 767 aa15.21■□□□□ 0.02
SIRPA-203ENST00000400068 MAN1B1Q9UKM7 699 aa15.21■□□□□ 0.02
SIRPA-203ENST00000400068 CCDC66A2RUB6 948 aa15.2■□□□□ 0.02
SIRPA-203ENST00000400068 USP27XA6NNY8 438 aa15.2■□□□□ 0.02
SIRPA-203ENST00000400068 TMEM232C9JQI7 657 aa15.2■□□□□ 0.02
SIRPA-203ENST00000400068 ZNF569Q5MCW4 686 aa15.2■□□□□ 0.02
SIRPA-203ENST00000400068 RGPD2P0DJD1 1756 aa15.2■□□□□ 0.02
SIRPA-203ENST00000400068 CLEC10AQ8IUN9 316 aa15.2■□□□□ 0.02
SIRPA-203ENST00000400068 STAG2Q8N3U4 1231 aa15.2■□□□□ 0.02
SIRPA-203ENST00000400068 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.2■□□□□ 0.02
SIRPA-203ENST00000400068 ABCC12Q96J65 1359 aa15.2■□□□□ 0.02
SIRPA-203ENST00000400068 AKR1B15C9JRZ8 316 aaPredicted RBP15.2■□□□□ 0.02
SIRPA-203ENST00000400068 MYO1BO43795 1136 aa15.2■□□□□ 0.02
SIRPA-203ENST00000400068 NONOQ15233 471 aaKnown RBP eCLIP15.2■□□□□ 0.02
SIRPA-203ENST00000400068 KRT79Q5XKE5 535 aa15.2■□□□□ 0.02
SIRPA-203ENST00000400068 COA7Q96BR5 231 aa15.2■□□□□ 0.02
SIRPA-203ENST00000400068 ZNF215Q9UL58 517 aaPredicted RBP15.2■□□□□ 0.02
SIRPA-203ENST00000400068 TCHHQ07283 1943 aa15.2■□□□□ 0.02
SIRPA-203ENST00000400068 GPS2Q13227 327 aa15.19■□□□□ 0.02
SIRPA-203ENST00000400068 NELFBQ8WX92 580 aa15.19■□□□□ 0.02
SIRPA-203ENST00000400068 GRAPQ13588 217 aa15.19■□□□□ 0.02
SIRPA-203ENST00000400068 SPA17Q15506 151 aa15.19■□□□□ 0.02
SIRPA-203ENST00000400068 TICAM2Q86XR7 235 aa15.19■□□□□ 0.02
SIRPA-203ENST00000400068 ZNF397Q8NF99 534 aaPredicted RBP15.19■□□□□ 0.02
SIRPA-203ENST00000400068 GRAPLQ8TC17 118 aaPredicted RBP15.19■□□□□ 0.02
SIRPA-203ENST00000400068 FERMT2Q96AC1 680 aa15.19■□□□□ 0.02
SIRPA-203ENST00000400068 NSUN4Q96CB9 384 aaKnown RBP15.19■□□□□ 0.02
SIRPA-203ENST00000400068 PPP2R5BQ15173 497 aa15.19■□□□□ 0.02
SIRPA-203ENST00000400068 HSP90B2PQ58FF3 399 aa15.19■□□□□ 0.02
SIRPA-203ENST00000400068 AXDND1Q5T1B0 1012 aaPredicted RBP15.19■□□□□ 0.02
SIRPA-203ENST00000400068 CARD6Q9BX69 1037 aa15.19■□□□□ 0.02
SIRPA-203ENST00000400068 MROH7-TTC4A0A0A0MT08 1334 aa15.19■□□□□ 0.02
SIRPA-203ENST00000400068 CCDC175P0C221 793 aa15.19■□□□□ 0.02
SIRPA-203ENST00000400068 PAK1Q13153 545 aa15.19■□□□□ 0.02
SIRPA-203ENST00000400068 CCDC181Q5TID7 509 aa15.19■□□□□ 0.02
SIRPA-203ENST00000400068 REXO1Q8N1G1 1221 aaKnown RBP15.19■□□□□ 0.02
SIRPA-203ENST00000400068 SLC1A4P43007 532 aa15.18■□□□□ 0.02
SIRPA-203ENST00000400068 SGMS1Q86VZ5 419 aa15.18■□□□□ 0.02
SIRPA-203ENST00000400068 PP2D1A8MPX8 630 aa15.18■□□□□ 0.02
SIRPA-203ENST00000400068 ALX1Q15699 326 aa15.18■□□□□ 0.02
SIRPA-203ENST00000400068 KCTD1Q719H9 257 aa15.18■□□□□ 0.02
SIRPA-203ENST00000400068 DHX40Q8IX18 779 aaKnown RBP15.18■□□□□ 0.02
SIRPA-203ENST00000400068 CSGALNACT2Q8N6G5 542 aa15.18■□□□□ 0.02
SIRPA-203ENST00000400068 CTAGE1Q96RT6 745 aa15.18■□□□□ 0.02
SIRPA-203ENST00000400068 PIGSQ96S52 555 aa15.18■□□□□ 0.02
SIRPA-203ENST00000400068 TSG101Q99816 390 aa15.18■□□□□ 0.02
SIRPA-203ENST00000400068 DCCP43146 1447 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms