RNA–Protein interactions for RNA: ENST00000398189.3

APOF-201, Transcript of apolipoprotein F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOF, Length 1,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOF-201ENST00000398189 GJA3Q9Y6H8 435 aa16.72■□□□□ 0.27
APOF-201ENST00000398189 V9GY48 417 aaPredicted RBP16.72■□□□□ 0.27
APOF-201ENST00000398189 hCG_1642624A0A1W2PR95 340 aa16.71■□□□□ 0.27
APOF-201ENST00000398189 PALM3A6NDB9 673 aaPredicted RBP16.71■□□□□ 0.27
APOF-201ENST00000398189 MPHOSPH10O00566 681 aaKnown RBP16.71■□□□□ 0.27
APOF-201ENST00000398189 TTLL1O95922 423 aa16.71■□□□□ 0.27
APOF-201ENST00000398189 AKAP17AQ02040 695 aaKnown RBP16.71■□□□□ 0.27
APOF-201ENST00000398189 SHROOM1Q2M3G4 852 aaPredicted RBP16.71■□□□□ 0.27
APOF-201ENST00000398189 BRAPQ7Z569 592 aa16.71■□□□□ 0.27
APOF-201ENST00000398189 SHISA4Q96DD7 197 aa16.71■□□□□ 0.27
APOF-201ENST00000398189 SCAND2PQ9GZW5 306 aaPredicted RBP16.71■□□□□ 0.27
APOF-201ENST00000398189 HERC5Q9UII4 1024 aaKnown RBP16.71■□□□□ 0.27
APOF-201ENST00000398189 ELP1O95163 1332 aa16.71■□□□□ 0.27
APOF-201ENST00000398189 UTRNP46939 3433 aa16.7■□□□□ 0.26
APOF-201ENST00000398189 MMP1P03956 469 aa16.7■□□□□ 0.26
APOF-201ENST00000398189 GNAQP50148 359 aa16.7■□□□□ 0.26
APOF-201ENST00000398189 SLC35G1Q2M3R5 365 aa16.7■□□□□ 0.26
APOF-201ENST00000398189 LRRC47Q8N1G4 583 aaKnown RBP16.7■□□□□ 0.26
APOF-201ENST00000398189 GZF1Q9H116 711 aaPredicted RBP16.7■□□□□ 0.26
APOF-201ENST00000398189 PGAP2Q9UHJ9 254 aa16.7■□□□□ 0.26
APOF-201ENST00000398189 MTMR7Q9Y216 660 aa16.7■□□□□ 0.26
APOF-201ENST00000398189 MBD3O95983 291 aa16.7■□□□□ 0.26
APOF-201ENST00000398189 CDAN1Q8IWY9 1227 aa16.7■□□□□ 0.26
APOF-201ENST00000398189 LEO1Q8WVC0 666 aaPredicted RBP16.7■□□□□ 0.26
APOF-201ENST00000398189 TMEM39BQ9GZU3 492 aa16.7■□□□□ 0.26
APOF-201ENST00000398189 CLIP2Q9UDT6 1046 aa16.7■□□□□ 0.26
APOF-201ENST00000398189 CNOT7Q9UIV1 285 aaKnown RBP16.7■□□□□ 0.26
APOF-201ENST00000398189 KCNJ14Q9UNX9 436 aa16.7■□□□□ 0.26
APOF-201ENST00000398189 PARP1P09874 1014 aaKnown RBP16.69■□□□□ 0.26
APOF-201ENST00000398189 GOLGA8HP0CJ92 632 aa16.69■□□□□ 0.26
APOF-201ENST00000398189 PDHBP11177 359 aa16.69■□□□□ 0.26
APOF-201ENST00000398189 U2AF2P26368 475 aaKnown RBP eCLIP16.69■□□□□ 0.26
APOF-201ENST00000398189 UBE2HP62256 183 aa16.69■□□□□ 0.26
APOF-201ENST00000398189 RRP1BQ14684 758 aaKnown RBP16.69■□□□□ 0.26
APOF-201ENST00000398189 RBM26Q5T8P6 1007 aaKnown RBP16.69■□□□□ 0.26
APOF-201ENST00000398189 ATL3Q6DD88 541 aa16.69■□□□□ 0.26
APOF-201ENST00000398189 SAMD7Q7Z3H4 446 aa16.69■□□□□ 0.26
APOF-201ENST00000398189 USP28Q96RU2 1077 aa16.69■□□□□ 0.26
APOF-201ENST00000398189 FTOQ9C0B1 505 aaKnown RBP eCLIP16.69■□□□□ 0.26
APOF-201ENST00000398189 CFAP45Q9UL16 551 aa16.69■□□□□ 0.26
APOF-201ENST00000398189 CYTH3O43739 400 aa16.68■□□□□ 0.26
APOF-201ENST00000398189 GDF11O95390 407 aa16.68■□□□□ 0.26
APOF-201ENST00000398189 SNHG28P0DPA3 235 aa16.68■□□□□ 0.26
APOF-201ENST00000398189 YBX3P16989 372 aaKnown RBP eCLIP16.68■□□□□ 0.26
APOF-201ENST00000398189 PPP4R3BQ5MIZ7 849 aa16.68■□□□□ 0.26
APOF-201ENST00000398189 MYSM1Q5VVJ2 828 aa16.68■□□□□ 0.26
APOF-201ENST00000398189 USP17L2Q6R6M4 530 aa16.68■□□□□ 0.26
APOF-201ENST00000398189 TMEM179Q6ZVK1 233 aa16.68■□□□□ 0.26
APOF-201ENST00000398189 SPATA32Q96LK8 384 aa16.68■□□□□ 0.26
APOF-201ENST00000398189 ZNF396Q96N95 335 aaPredicted RBP16.68■□□□□ 0.26
APOF-201ENST00000398189 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.68■□□□□ 0.26
APOF-201ENST00000398189 VPS54Q9P1Q0 977 aa16.68■□□□□ 0.26
APOF-201ENST00000398189 USP17L5A8MUK1 530 aa16.67■□□□□ 0.26
APOF-201ENST00000398189 KLRF2D3W0D1 207 aa16.67■□□□□ 0.26
APOF-201ENST00000398189 SCG2P13521 617 aa16.67■□□□□ 0.26
APOF-201ENST00000398189 JAG1P78504 1218 aa16.67■□□□□ 0.26
APOF-201ENST00000398189 GSE1Q14687 1217 aa16.67■□□□□ 0.26
APOF-201ENST00000398189 PFKFB3Q16875 520 aaPredicted RBP16.67■□□□□ 0.26
APOF-201ENST00000398189 ABCB5Q2M3G0 1257 aa16.67■□□□□ 0.26
APOF-201ENST00000398189 LZTS2Q9BRK4 669 aa16.67■□□□□ 0.26
APOF-201ENST00000398189 PHF20Q9BVI0 1012 aa16.67■□□□□ 0.26
APOF-201ENST00000398189 SPZ1Q9BXG8 430 aa16.67■□□□□ 0.26
APOF-201ENST00000398189 KANSL2Q9H9L4 492 aa16.67■□□□□ 0.26
APOF-201ENST00000398189 NYAP2Q9P242 653 aa16.67■□□□□ 0.26
APOF-201ENST00000398189 RBM27Q9P2N5 1060 aaKnown RBP16.67■□□□□ 0.26
APOF-201ENST00000398189 VEGFAP15692 232 aaPredicted RBP16.67■□□□□ 0.26
APOF-201ENST00000398189 XBP1P17861 261 aa16.67■□□□□ 0.26
APOF-201ENST00000398189 SEPT2Q15019 361 aa16.67■□□□□ 0.26
APOF-201ENST00000398189 KIF4BQ2VIQ3 1234 aa16.67■□□□□ 0.26
APOF-201ENST00000398189 TBC1D10BQ4KMP7 808 aaPredicted RBP16.67■□□□□ 0.26
APOF-201ENST00000398189 CAVIN1Q6NZI2 390 aaKnown RBP16.67■□□□□ 0.26
APOF-201ENST00000398189 DIS3L2Q8IYB7 885 aaKnown RBP16.67■□□□□ 0.26
APOF-201ENST00000398189 GPC2Q8N158 579 aa16.67■□□□□ 0.26
APOF-201ENST00000398189 ASTN2O75129 1339 aaPredicted RBP16.66■□□□□ 0.26
APOF-201ENST00000398189 BTBD18B2RXH4 712 aa16.66■□□□□ 0.26
APOF-201ENST00000398189 TBC1D12O60347 775 aa16.66■□□□□ 0.26
APOF-201ENST00000398189 EEF2P13639 858 aaKnown RBP16.66■□□□□ 0.26
APOF-201ENST00000398189 TNNI2P48788 182 aa16.66■□□□□ 0.26
APOF-201ENST00000398189 CEBPZQ03701 1054 aaKnown RBP16.66■□□□□ 0.26
APOF-201ENST00000398189 GNL2Q13823 731 aaKnown RBP16.66■□□□□ 0.26
APOF-201ENST00000398189 SAFBQ15424 915 aaKnown RBP eCLIP16.66■□□□□ 0.26
APOF-201ENST00000398189 SIAH1Q8IUQ4 282 aa16.66■□□□□ 0.26
APOF-201ENST00000398189 PIBF1Q8WXW3 757 aa16.66■□□□□ 0.26
APOF-201ENST00000398189 MKL1Q969V6 931 aa16.66■□□□□ 0.26
APOF-201ENST00000398189 FOXP1Q9H334 677 aaPredicted RBP16.66■□□□□ 0.26
APOF-201ENST00000398189 RCOR1Q9UKL0 485 aa16.66■□□□□ 0.26
APOF-201ENST00000398189 SCAF8Q9UPN6 1271 aaKnown RBP16.66■□□□□ 0.26
APOF-201ENST00000398189 GH2P01242 217 aa16.65■□□□□ 0.26
APOF-201ENST00000398189 SMARCA1P28370 1054 aa16.65■□□□□ 0.26
APOF-201ENST00000398189 ATP2B2Q01814 1243 aa16.65■□□□□ 0.26
APOF-201ENST00000398189 ICA1Q05084 483 aa16.65■□□□□ 0.26
APOF-201ENST00000398189 TNFAIP1Q13829 316 aa16.65■□□□□ 0.26
APOF-201ENST00000398189 RASA3Q14644 834 aa16.65■□□□□ 0.26
APOF-201ENST00000398189 NPY5RQ15761 445 aa16.65■□□□□ 0.26
APOF-201ENST00000398189 ASPRV1Q53RT3 343 aa16.65■□□□□ 0.26
APOF-201ENST00000398189 NOSTRINQ8IVI9 506 aa16.65■□□□□ 0.26
APOF-201ENST00000398189 OXER1Q8TDS5 423 aa16.65■□□□□ 0.26
APOF-201ENST00000398189 CPVLQ9H3G5 476 aa16.65■□□□□ 0.26
APOF-201ENST00000398189 POLR3EQ9NVU0 708 aa16.65■□□□□ 0.26
APOF-201ENST00000398189 RTEL1Q9NZ71 1219 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms