RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 WTAPQ15007 396 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 IQCA1Q86XH1 822 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 ZNF34Q8IZ26 560 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 MAP2K7O14733 419 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 IFIT3O14879 490 aaKnown RBP6.12□□□□□ -1.43
PTPRD-205ENST00000397611 SEPT7Q16181 437 aaKnown RBP6.12□□□□□ -1.43
PTPRD-205ENST00000397611 E2F4Q16254 413 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 COBLL1Q53SF7 1204 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 UBAC1Q9BSL1 405 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 PLEKHA4Q9H4M7 779 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 RNF14Q9UBS8 474 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 KAT6BQ8WYB5 2073 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 SIPA1L3O60292 1781 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-205ENST00000397611 AKR1B15C9JRZ8 316 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-205ENST00000397611 H7C1D1 291 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 USO1O60763 962 aaKnown RBP6.12□□□□□ -1.43
PTPRD-205ENST00000397611 RPS6KA5O75582 802 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 RASGRP2Q7LDG7 609 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 IFNL3Q8IZI9 196 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 CRACR2BQ8N4Y2 399 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-205ENST00000397611 MKRN1Q9UHC7 482 aaKnown RBP6.12□□□□□ -1.43
PTPRD-205ENST00000397611 FBXO2Q9UK22 296 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-205ENST00000397611 WWC3Q9ULE0 1092 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 GUCA1BQ9UMX6 200 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 FHOD1Q9Y613 1164 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 RIC1Q4ADV7 1423 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 UBN2Q6ZU65 1347 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 SRRM3A6NNA2 597 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-205ENST00000397611 GTPBP6O43824 516 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-205ENST00000397611 KIF4AO95239 1232 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 CC2D1AQ6P1N0 951 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-205ENST00000397611 FOXP4Q8IVH2 680 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-205ENST00000397611 ANKS1AQ92625 1134 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 ZBTB3Q9H5J0 574 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 EFCC1Q9HA90 598 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 SMARCA1P28370 1054 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 MDM2Q00987 491 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-205ENST00000397611 CCDC155Q8N6L0 562 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 LY9Q9HBG7 655 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 FANCLQ9NW38 375 aa6.12□□□□□ -1.43
PTPRD-205ENST00000397611 GLI3P10071 1580 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 NR1I3Q14994 352 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 SPECC1Q5M775 1068 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 TRPM3Q9HCF6 1732 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-205ENST00000397611 MRFAP1Q9Y605 127 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 hCG_1984214I3L0E3 225 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 NDUFAB1O14561 156 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 MARCKSP29966 332 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-205ENST00000397611 TROAPQ12815 778 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 CUL4BQ13620 913 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 ZNF713Q8N859 430 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-205ENST00000397611 C1orf131Q8NDD1 294 aaKnown RBP6.11□□□□□ -1.43
PTPRD-205ENST00000397611 CCSER1Q9C0I3 900 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 L1RE1Q9UN81 338 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 HNRNPH3P31942 346 aaKnown RBP6.11□□□□□ -1.43
PTPRD-205ENST00000397611 CTSWP56202 376 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 PUS7LQ9H0K6 701 aaKnown RBP6.11□□□□□ -1.43
PTPRD-205ENST00000397611 CAPN7Q9Y6W3 813 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 N4BP3O15049 544 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 ATP1A3P13637 1013 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 MCAMP43121 646 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 SEC23AQ15436 765 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 GDAP1L1Q96MZ0 367 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 PRM3Q9NNZ6 103 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 ATP8A2Q9NTI2 1148 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 CLIC4Q9Y696 253 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 TCHHQ07283 1943 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 GOLGA6CA6NDK9 693 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 KRT18P05783 430 aaKnown RBP6.11□□□□□ -1.43
PTPRD-205ENST00000397611 GOLGA6DP0CG33 693 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 KIF5BP33176 963 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 FKBP15Q5T1M5 1219 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 APTXQ7Z2E3 356 aaKnown RBP6.11□□□□□ -1.43
PTPRD-205ENST00000397611 CCDC84Q86UT8 332 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-205ENST00000397611 MICU3Q86XE3 530 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 ZNF654Q8IZM8 581 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 LZTS2Q9BRK4 669 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 NUP58Q9BVL2 599 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 GOLGA6AQ9NYA3 693 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 FER1L4A9Z1Z3 1794 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 LONP1P36776 959 aaKnown RBP6.11□□□□□ -1.43
PTPRD-205ENST00000397611 EIF1ADQ8N9N8 165 aaKnown RBP6.11□□□□□ -1.43
PTPRD-205ENST00000397611 AK8Q96MA6 479 aa6.11□□□□□ -1.43
PTPRD-205ENST00000397611 FTOQ9C0B1 505 aaKnown RBP eCLIP6.11□□□□□ -1.43
PTPRD-205ENST00000397611 COL5A2P05997 1499 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-205ENST00000397611 BTBD18B2RXH4 712 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 BUB1BO60566 1050 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-205ENST00000397611 KRT83P78385 493 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 SBK1Q52WX2 424 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 TDRD12Q587J7 1177 aaKnown RBP6.1□□□□□ -1.43
PTPRD-205ENST00000397611 TOM1L2Q6ZVM7 507 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 SH3GLB2Q9NR46 395 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 ESYT2A0FGR8 921 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 VWA3AA6NCI4 1184 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 SLC26A4O43511 780 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 A1BGP04217 495 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 PRLRP16471 622 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 FUT2Q10981 343 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 PPP2R5AQ15172 486 aa6.1□□□□□ -1.43
PTPRD-205ENST00000397611 JRKLQ9Y4A0 524 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms