RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 RCAN1P53805 252 aa24.68■■□□□ 1.54
CPNE1-204ENST00000397443 PKP1Q13835 747 aa24.68■■□□□ 1.54
CPNE1-204ENST00000397443 CPLX2Q6PUV4 134 aaKnown RBP24.68■■□□□ 1.54
CPNE1-204ENST00000397443 CDCA5Q96FF9 252 aa24.68■■□□□ 1.54
CPNE1-204ENST00000397443 ISY1Q9ULR0 285 aaKnown RBP24.68■■□□□ 1.54
CPNE1-204ENST00000397443 BAZ2BQ9UIF8 2168 aaKnown RBP24.67■■□□□ 1.54
CPNE1-204ENST00000397443 CCDC196A0A1B0GTZ2 297 aa24.67■■□□□ 1.54
CPNE1-204ENST00000397443 USP17L5A8MUK1 530 aa24.67■■□□□ 1.54
CPNE1-204ENST00000397443 FOXD4L5Q5VV16 416 aaPredicted RBP24.67■■□□□ 1.54
CPNE1-204ENST00000397443 USP17L2Q6R6M4 530 aa24.67■■□□□ 1.54
CPNE1-204ENST00000397443 STAG2Q8N3U4 1231 aa24.67■■□□□ 1.54
CPNE1-204ENST00000397443 FAM184AQ8NB25 1140 aa24.67■■□□□ 1.54
CPNE1-204ENST00000397443 FOXD4L4Q8WXT5 416 aaPredicted RBP24.67■■□□□ 1.54
CPNE1-204ENST00000397443 NYAP2Q9P242 653 aa24.67■■□□□ 1.54
CPNE1-204ENST00000397443 ASNSP08243 561 aa24.67■■□□□ 1.54
CPNE1-204ENST00000397443 NTRK3Q16288 839 aa24.67■■□□□ 1.54
CPNE1-204ENST00000397443 PPP4R3BQ5MIZ7 849 aa24.67■■□□□ 1.54
CPNE1-204ENST00000397443 CDC37L1Q7L3B6 337 aa24.67■■□□□ 1.54
CPNE1-204ENST00000397443 SMARCC2Q8TAQ2 1214 aa24.67■■□□□ 1.54
CPNE1-204ENST00000397443 NID2Q14112 1375 aa24.67■■□□□ 1.54
CPNE1-204ENST00000397443 ATAD5Q96QE3 1844 aa24.66■■□□□ 1.54
CPNE1-204ENST00000397443 CTNND1O60716 968 aaKnown RBP24.66■■□□□ 1.54
CPNE1-204ENST00000397443 ECE1P42892 770 aa24.66■■□□□ 1.54
CPNE1-204ENST00000397443 FRMPD2Q68DX3 1309 aaPredicted RBP24.66■■□□□ 1.54
CPNE1-204ENST00000397443 ACER1Q8TDN7 264 aa24.66■■□□□ 1.54
CPNE1-204ENST00000397443 SLC26A6Q9BXS9 759 aa24.66■■□□□ 1.54
CPNE1-204ENST00000397443 RBM28Q9NW13 759 aaKnown RBP24.66■■□□□ 1.54
CPNE1-204ENST00000397443 CHMP5Q9NZZ3 219 aa24.66■■□□□ 1.54
CPNE1-204ENST00000397443 A0A1W2PRG0 241 aa24.65■■□□□ 1.54
CPNE1-204ENST00000397443 UBE2Q2LH0YL09 131 aa24.65■■□□□ 1.54
CPNE1-204ENST00000397443 CDKL5O76039 1030 aa24.65■■□□□ 1.54
CPNE1-204ENST00000397443 KIF5BP33176 963 aa24.65■■□□□ 1.54
CPNE1-204ENST00000397443 FMR1Q06787 632 aaKnown RBP eCLIP24.65■■□□□ 1.547e-7■■■□□ 18.6
CPNE1-204ENST00000397443 GRM4Q14833 912 aa24.65■■□□□ 1.54
CPNE1-204ENST00000397443 ZYXQ15942 572 aaKnown RBP24.65■■□□□ 1.54
CPNE1-204ENST00000397443 PIBF1Q8WXW3 757 aa24.65■■□□□ 1.54
CPNE1-204ENST00000397443 ORC3Q9UBD5 711 aaPredicted RBP24.65■■□□□ 1.54
CPNE1-204ENST00000397443 MAD2L2Q9UI95 211 aa24.65■■□□□ 1.54
CPNE1-204ENST00000397443 TRAF5O00463 557 aa24.65■■□□□ 1.54
CPNE1-204ENST00000397443 TTLL12Q14166 644 aaPredicted RBP24.65■■□□□ 1.54
CPNE1-204ENST00000397443 KLRG1Q96E93 195 aa24.65■■□□□ 1.54
CPNE1-204ENST00000397443 ARHGEF10LQ9HCE6 1279 aa24.65■■□□□ 1.54
CPNE1-204ENST00000397443 hCG_1642624A0A1W2PR95 340 aa24.64■■□□□ 1.53
CPNE1-204ENST00000397443 USP2O75604 605 aaPredicted RBP24.64■■□□□ 1.53
CPNE1-204ENST00000397443 PARP1P09874 1014 aaKnown RBP24.64■■□□□ 1.53
CPNE1-204ENST00000397443 PDHBP11177 359 aa24.64■■□□□ 1.53
CPNE1-204ENST00000397443 FDPSP14324 419 aaKnown RBP24.64■■□□□ 1.53
CPNE1-204ENST00000397443 HMGN5P82970 282 aaKnown RBP24.64■■□□□ 1.53
CPNE1-204ENST00000397443 CPVLQ9H3G5 476 aa24.64■■□□□ 1.53
CPNE1-204ENST00000397443 ZNF408Q9H9D4 720 aa24.64■■□□□ 1.53
CPNE1-204ENST00000397443 ZNF112Q9UJU3 913 aa24.64■■□□□ 1.53
CPNE1-204ENST00000397443 PPP1R12BO60237 982 aaPredicted RBP24.63■■□□□ 1.53
CPNE1-204ENST00000397443 IFNAR1P17181 557 aa24.63■■□□□ 1.53
CPNE1-204ENST00000397443 NF2P35240 595 aa24.63■■□□□ 1.53
CPNE1-204ENST00000397443 SSRP1Q08945 709 aaKnown RBP24.63■■□□□ 1.53
CPNE1-204ENST00000397443 PPP2R5BQ15173 497 aa24.63■■□□□ 1.53
CPNE1-204ENST00000397443 LARP1BQ659C4 914 aaKnown RBP24.63■■□□□ 1.53
CPNE1-204ENST00000397443 TMTC3Q6ZXV5 915 aa24.63■■□□□ 1.53
CPNE1-204ENST00000397443 SRBD1Q8N5C6 995 aaKnown RBP24.63■■□□□ 1.53
CPNE1-204ENST00000397443 MKL1Q969V6 931 aa24.63■■□□□ 1.53
CPNE1-204ENST00000397443 GPCPD1Q9NPB8 672 aa24.63■■□□□ 1.53
CPNE1-204ENST00000397443 SYT1P21579 422 aa24.63■■□□□ 1.53
CPNE1-204ENST00000397443 CCDC96Q2M329 555 aa24.63■■□□□ 1.53
CPNE1-204ENST00000397443 MOB2Q70IA6 237 aa24.63■■□□□ 1.53
CPNE1-204ENST00000397443 NBPF11Q86T75 865 aa24.63■■□□□ 1.53
CPNE1-204ENST00000397443 SPICE1Q8N0Z3 855 aa24.63■■□□□ 1.53
CPNE1-204ENST00000397443 PICK1Q9NRD5 415 aa24.63■■□□□ 1.53
CPNE1-204ENST00000397443 KCTD1Q719H9 257 aa24.62■■□□□ 1.53
CPNE1-204ENST00000397443 SCYL3Q8IZE3 742 aa24.62■■□□□ 1.53
CPNE1-204ENST00000397443 VPS37CA5D8V6 355 aaPredicted RBP24.61■■□□□ 1.53
CPNE1-204ENST00000397443 F5H6K3 240 aa24.61■■□□□ 1.53
CPNE1-204ENST00000397443 KLRC3Q07444 240 aa24.61■■□□□ 1.53
CPNE1-204ENST00000397443 SLFN13Q68D06 897 aa24.61■■□□□ 1.53
CPNE1-204ENST00000397443 TRIM22Q8IYM9 498 aa24.61■■□□□ 1.53
CPNE1-204ENST00000397443 AIFM3Q96NN9 605 aa24.61■■□□□ 1.53
CPNE1-204ENST00000397443 MAP3K14Q99558 947 aa24.61■■□□□ 1.53
CPNE1-204ENST00000397443 NUP88Q99567 741 aaPredicted RBP24.61■■□□□ 1.53
CPNE1-204ENST00000397443 FEZ1Q99689 392 aa24.61■■□□□ 1.53
CPNE1-204ENST00000397443 CIZ1Q9ULV3 898 aaPredicted RBP24.61■■□□□ 1.53
CPNE1-204ENST00000397443 KLRF2D3W0D1 207 aa24.61■■□□□ 1.53
CPNE1-204ENST00000397443 FMNL1O95466 1100 aaPredicted RBP24.61■■□□□ 1.53
CPNE1-204ENST00000397443 LDHDQ86WU2 507 aa24.61■■□□□ 1.53
CPNE1-204ENST00000397443 DOCK1Q14185 1865 aa24.6■■□□□ 1.53
CPNE1-204ENST00000397443 PALM3A6NDB9 673 aaPredicted RBP24.6■■□□□ 1.53
CPNE1-204ENST00000397443 SLC1A4P43007 532 aa24.6■■□□□ 1.53
CPNE1-204ENST00000397443 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.6■■□□□ 1.532e-6■□□□□ 10.3
CPNE1-204ENST00000397443 UBA5Q9GZZ9 404 aa24.6■■□□□ 1.53
CPNE1-204ENST00000397443 V9GY48 417 aaPredicted RBP24.6■■□□□ 1.53
CPNE1-204ENST00000397443 STX6O43752 255 aa24.59■■□□□ 1.53
CPNE1-204ENST00000397443 NDUFB10O96000 172 aa24.59■■□□□ 1.53
CPNE1-204ENST00000397443 AKAP17AQ02040 695 aaKnown RBP24.59■■□□□ 1.53
CPNE1-204ENST00000397443 GUCY1B3Q02153 619 aa24.59■■□□□ 1.53
CPNE1-204ENST00000397443 FUT2Q10981 343 aa24.59■■□□□ 1.53
CPNE1-204ENST00000397443 GJB4Q9NTQ9 266 aa24.59■■□□□ 1.53
CPNE1-204ENST00000397443 TMX2Q9Y320 296 aa24.59■■□□□ 1.53
CPNE1-204ENST00000397443 KIF3AQ9Y496 699 aa24.59■■□□□ 1.53
CPNE1-204ENST00000397443 CNTNAP5Q8WYK1 1306 aa24.59■■□□□ 1.53
CPNE1-204ENST00000397443 KIAA1755Q5JYT7 1200 aa24.59■■□□□ 1.53
CPNE1-204ENST00000397443 TTBK2Q6IQ55 1244 aa24.59■■□□□ 1.53
CPNE1-204ENST00000397443 VAT1LQ9HCJ6 419 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms