RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 IDH1O75874 414 aaKnown RBP18.25■□□□□ 0.51
SEC13-206ENST00000397102 MYCNP04198 464 aaPredicted RBP18.25■□□□□ 0.51
SEC13-206ENST00000397102 GUCY1A2P33402 732 aa18.25■□□□□ 0.51
SEC13-206ENST00000397102 SHMT1P34896 483 aa18.25■□□□□ 0.51
SEC13-206ENST00000397102 ADCYAP1R1P41586 468 aa18.25■□□□□ 0.51
SEC13-206ENST00000397102 COG2Q14746 738 aa18.25■□□□□ 0.51
SEC13-206ENST00000397102 LRRC41Q15345 812 aa18.25■□□□□ 0.51
SEC13-206ENST00000397102 SPATC1LQ9H0A9 340 aa18.25■□□□□ 0.51
SEC13-206ENST00000397102 SLC5A4Q9NY91 659 aa18.25■□□□□ 0.51
SEC13-206ENST00000397102 HOXC10Q9NYD6 342 aa18.25■□□□□ 0.51
SEC13-206ENST00000397102 COBLO75128 1261 aa18.24■□□□□ 0.51
SEC13-206ENST00000397102 ERCC3P19447 782 aa18.24■□□□□ 0.51
SEC13-206ENST00000397102 OS9Q13438 667 aaPredicted RBP18.24■□□□□ 0.51
SEC13-206ENST00000397102 POLA2Q14181 598 aa18.24■□□□□ 0.51
SEC13-206ENST00000397102 ZNFX1Q9P2E3 1918 aaKnown RBP18.23■□□□□ 0.51
SEC13-206ENST00000397102 CDH23Q9H251 3354 aa18.23■□□□□ 0.51
SEC13-206ENST00000397102 IPO8O15397 1037 aaKnown RBP18.23■□□□□ 0.51
SEC13-206ENST00000397102 TRIM27P14373 513 aa18.23■□□□□ 0.51
SEC13-206ENST00000397102 TLE2Q04725 743 aa18.23■□□□□ 0.51
SEC13-206ENST00000397102 SEPT2Q15019 361 aa18.23■□□□□ 0.51
SEC13-206ENST00000397102 FAM47AQ5JRC9 791 aa18.23■□□□□ 0.51
SEC13-206ENST00000397102 TMED8Q6PL24 325 aaPredicted RBP18.23■□□□□ 0.51
SEC13-206ENST00000397102 ABRAQ8N0Z2 381 aa18.23■□□□□ 0.51
SEC13-206ENST00000397102 MAGEB6Q8N7X4 407 aa18.23■□□□□ 0.51
SEC13-206ENST00000397102 MB21D1Q8N884 522 aa18.23■□□□□ 0.51
SEC13-206ENST00000397102 FERMT2Q96AC1 680 aa18.23■□□□□ 0.51
SEC13-206ENST00000397102 RNPC3Q96LT9 517 aaKnown RBP18.23■□□□□ 0.51
SEC13-206ENST00000397102 TANGO6Q9C0B7 1094 aa18.23■□□□□ 0.51
SEC13-206ENST00000397102 MROH8Q9H579 483 aa18.23■□□□□ 0.51
SEC13-206ENST00000397102 DBNLQ9UJU6 430 aaKnown RBP18.23■□□□□ 0.51
SEC13-206ENST00000397102 TACC3Q9Y6A5 838 aa18.23■□□□□ 0.51
SEC13-206ENST00000397102 SMCHD1A6NHR9 2005 aa18.22■□□□□ 0.51
SEC13-206ENST00000397102 PARP14Q460N5 1801 aa18.22■□□□□ 0.51
SEC13-206ENST00000397102 PLCD1P51178 756 aa18.22■□□□□ 0.51
SEC13-206ENST00000397102 PRAMEF19Q5SWL8 479 aa18.22■□□□□ 0.51
SEC13-206ENST00000397102 SSH3Q8TE77 659 aa18.22■□□□□ 0.51
SEC13-206ENST00000397102 PHF24Q9UPV7 400 aa18.22■□□□□ 0.51
SEC13-206ENST00000397102 A0A1W2PRG0 241 aa18.21■□□□□ 0.51
SEC13-206ENST00000397102 CLTBP09497 229 aa18.21■□□□□ 0.51
SEC13-206ENST00000397102 ITGB8P26012 769 aa18.21■□□□□ 0.51
SEC13-206ENST00000397102 GABPAQ06546 454 aa18.21■□□□□ 0.51
SEC13-206ENST00000397102 MAML3Q96JK9 1138 aa18.21■□□□□ 0.51
SEC13-206ENST00000397102 TLR7Q9NYK1 1049 aaKnown RBP18.21■□□□□ 0.51
SEC13-206ENST00000397102 NRBP1Q9UHY1 535 aa18.21■□□□□ 0.51
SEC13-206ENST00000397102 TNNQ9UQP3 1299 aa18.21■□□□□ 0.51
SEC13-206ENST00000397102 MYH8P13535 1937 aa18.21■□□□□ 0.51
SEC13-206ENST00000397102 TTC28Q96AY4 2481 aa18.2■□□□□ 0.5
SEC13-206ENST00000397102 KIAA0355O15063 1070 aa18.2■□□□□ 0.5
SEC13-206ENST00000397102 SURF6O75683 361 aaKnown RBP18.2■□□□□ 0.5
SEC13-206ENST00000397102 DSG3P32926 999 aa18.2■□□□□ 0.5
SEC13-206ENST00000397102 EPHB4P54760 987 aa18.2■□□□□ 0.5
SEC13-206ENST00000397102 MAP3K12Q12852 859 aa18.2■□□□□ 0.5
SEC13-206ENST00000397102 TJAP1Q5JTD0 557 aa18.2■□□□□ 0.5
SEC13-206ENST00000397102 NCAPG2Q86XI2 1143 aa18.2■□□□□ 0.5
SEC13-206ENST00000397102 XPNPEP3Q9NQH7 507 aa18.2■□□□□ 0.5
SEC13-206ENST00000397102 PLXNA1Q9UIW2 1896 aa18.2■□□□□ 0.5
SEC13-206ENST00000397102 COL11A1P12107 1806 aaPredicted RBP18.19■□□□□ 0.5
SEC13-206ENST00000397102 POLR3DP05423 398 aaPredicted RBP18.19■□□□□ 0.5
SEC13-206ENST00000397102 RARBP10826 455 aa18.19■□□□□ 0.5
SEC13-206ENST00000397102 RAG1P15918 1043 aa18.19■□□□□ 0.5
SEC13-206ENST00000397102 ATP8B2P98198 1209 aa18.19■□□□□ 0.5
SEC13-206ENST00000397102 PLS1Q14651 629 aa18.19■□□□□ 0.5
SEC13-206ENST00000397102 PRUNE2Q8WUY3 3088 aa18.19■□□□□ 0.5
SEC13-206ENST00000397102 RIOK1Q9BRS2 568 aaKnown RBP18.19■□□□□ 0.5
SEC13-206ENST00000397102 CCDC8Q9H0W5 538 aaPredicted RBP18.19■□□□□ 0.5
SEC13-206ENST00000397102 ROBO3Q96MS0 1386 aa18.18■□□□□ 0.5
SEC13-206ENST00000397102 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.18■□□□□ 0.5
SEC13-206ENST00000397102 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.18■□□□□ 0.5
SEC13-206ENST00000397102 MPHOSPH10O00566 681 aaKnown RBP18.18■□□□□ 0.5
SEC13-206ENST00000397102 FCER1AP12319 257 aa18.18■□□□□ 0.5
SEC13-206ENST00000397102 FPGSQ05932 587 aa18.18■□□□□ 0.5
SEC13-206ENST00000397102 GRIN2CQ14957 1233 aa18.18■□□□□ 0.5
SEC13-206ENST00000397102 RNF180Q86T96 592 aa18.18■□□□□ 0.5
SEC13-206ENST00000397102 CLUAP1Q96AJ1 413 aa18.18■□□□□ 0.5
SEC13-206ENST00000397102 EAF2Q96CJ1 260 aaPredicted RBP18.18■□□□□ 0.5
SEC13-206ENST00000397102 ANTXR1Q9H6X2 564 aa18.18■□□□□ 0.5
SEC13-206ENST00000397102 NOP58Q9Y2X3 529 aaKnown RBP18.18■□□□□ 0.5
SEC13-206ENST00000397102 TNFRSF10AO00220 468 aa18.17■□□□□ 0.5
SEC13-206ENST00000397102 FLOT1O75955 427 aa18.17■□□□□ 0.5
SEC13-206ENST00000397102 DNAJB2P25686 324 aa18.17■□□□□ 0.5
SEC13-206ENST00000397102 KIAA1755Q5JYT7 1200 aa18.17■□□□□ 0.5
SEC13-206ENST00000397102 TMEM179Q6ZVK1 233 aa18.17■□□□□ 0.5
SEC13-206ENST00000397102 USP38Q8NB14 1042 aa18.17■□□□□ 0.5
SEC13-206ENST00000397102 FRAT1Q92837 279 aaPredicted RBP18.17■□□□□ 0.5
SEC13-206ENST00000397102 ATG4CQ96DT6 458 aa18.17■□□□□ 0.5
SEC13-206ENST00000397102 MAGEB6P1A0A0J9YX57 407 aa18.16■□□□□ 0.5
SEC13-206ENST00000397102 A0A1W2PQ45 241 aaPredicted RBP18.16■□□□□ 0.5
SEC13-206ENST00000397102 A0A1W2PQY0 241 aa18.16■□□□□ 0.5
SEC13-206ENST00000397102 PQBP1O60828 265 aaKnown RBP18.16■□□□□ 0.5
SEC13-206ENST00000397102 BCAR3O75815 825 aa18.16■□□□□ 0.5
SEC13-206ENST00000397102 SLC25A27O95847 323 aa18.16■□□□□ 0.5
SEC13-206ENST00000397102 PGK1P00558 417 aa18.16■□□□□ 0.5
SEC13-206ENST00000397102 TMEM39AQ9NV64 488 aa18.16■□□□□ 0.5
SEC13-206ENST00000397102 MCM9Q9NXL9 1143 aa18.16■□□□□ 0.5
SEC13-206ENST00000397102 COL9A1P20849 921 aa18.15■□□□□ 0.5
SEC13-206ENST00000397102 EVX2Q03828 476 aa18.15■□□□□ 0.5
SEC13-206ENST00000397102 ANKRD33Q7Z3H0 272 aa18.15■□□□□ 0.5
SEC13-206ENST00000397102 TMEM57Q8N5G2 664 aa18.15■□□□□ 0.5
SEC13-206ENST00000397102 TOX2Q96NM4 488 aa18.15■□□□□ 0.5
SEC13-206ENST00000397102 MMP19Q99542 508 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms