RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 MOV10L1Q9BXT6 1211 aaKnown RBP21.2■□□□□ 0.98
EXOSC3-202ENST00000396521 SPATC1LQ9H0A9 340 aa21.2■□□□□ 0.98
EXOSC3-202ENST00000396521 KBTBD13C9JR72 458 aa21.19■□□□□ 0.98
EXOSC3-202ENST00000396521 MPHOSPH10O00566 681 aaKnown RBP21.19■□□□□ 0.98
EXOSC3-202ENST00000396521 SEPT4O43236 478 aa21.19■□□□□ 0.98
EXOSC3-202ENST00000396521 ADORA2AP29274 412 aa21.19■□□□□ 0.98
EXOSC3-202ENST00000396521 TANGO6Q9C0B7 1094 aa21.19■□□□□ 0.98
EXOSC3-202ENST00000396521 NRBP1Q9UHY1 535 aa21.19■□□□□ 0.98
EXOSC3-202ENST00000396521 CDK5RAP2Q96SN8 1893 aa21.19■□□□□ 0.98
EXOSC3-202ENST00000396521 PDE6AP16499 860 aa21.18■□□□□ 0.98
EXOSC3-202ENST00000396521 CLASRPQ8N2M8 674 aaKnown RBP21.18■□□□□ 0.98
EXOSC3-202ENST00000396521 CCDC17Q96LX7 622 aa21.18■□□□□ 0.98
EXOSC3-202ENST00000396521 ARHGEF10LQ9HCE6 1279 aa21.18■□□□□ 0.98
EXOSC3-202ENST00000396521 MS4A1P11836 297 aa21.17■□□□□ 0.98
EXOSC3-202ENST00000396521 ERCC3P19447 782 aa21.17■□□□□ 0.98
EXOSC3-202ENST00000396521 ATN1P54259 1190 aaPredicted RBP21.17■□□□□ 0.98
EXOSC3-202ENST00000396521 RTP1P59025 263 aa21.17■□□□□ 0.98
EXOSC3-202ENST00000396521 EXOC6BQ9Y2D4 811 aa21.17■□□□□ 0.98
EXOSC3-202ENST00000396521 MYH1P12882 1939 aa21.16■□□□□ 0.98
EXOSC3-202ENST00000396521 A0A1W2PRG0 241 aa21.16■□□□□ 0.98
EXOSC3-202ENST00000396521 SLC25A27O95847 323 aa21.16■□□□□ 0.98
EXOSC3-202ENST00000396521 DSG3P32926 999 aa21.16■□□□□ 0.98
EXOSC3-202ENST00000396521 C1orf53Q5VUE5 145 aa21.16■□□□□ 0.98
EXOSC3-202ENST00000396521 SLC39A5Q6ZMH5 540 aa21.16■□□□□ 0.98
EXOSC3-202ENST00000396521 AMOTL1Q8IY63 956 aa21.16■□□□□ 0.98
EXOSC3-202ENST00000396521 TRPV1Q8NER1 839 aa21.16■□□□□ 0.98
EXOSC3-202ENST00000396521 RHPN1Q8TCX5 695 aa21.16■□□□□ 0.98
EXOSC3-202ENST00000396521 KIF1BPQ96EK5 621 aa21.16■□□□□ 0.98
EXOSC3-202ENST00000396521 DCP1AQ9NPI6 582 aaPredicted RBP21.16■□□□□ 0.98
EXOSC3-202ENST00000396521 ATP8A2Q9NTI2 1148 aa21.16■□□□□ 0.98
EXOSC3-202ENST00000396521 TMX2Q9Y320 296 aa21.16■□□□□ 0.98
EXOSC3-202ENST00000396521 DNAH12Q6ZR08 3092 aa21.15■□□□□ 0.98
EXOSC3-202ENST00000396521 ZNF532Q9HCE3 1301 aa21.15■□□□□ 0.98
EXOSC3-202ENST00000396521 FCER1AP12319 257 aa21.15■□□□□ 0.98
EXOSC3-202ENST00000396521 SNX17Q15036 470 aa21.15■□□□□ 0.98
EXOSC3-202ENST00000396521 HMMRO75330 724 aa21.14■□□□□ 0.97
EXOSC3-202ENST00000396521 FLOT1O75955 427 aa21.14■□□□□ 0.97
EXOSC3-202ENST00000396521 RLBP1P12271 317 aa21.14■□□□□ 0.97
EXOSC3-202ENST00000396521 GJC2Q5T442 439 aaPredicted RBP21.14■□□□□ 0.97
EXOSC3-202ENST00000396521 ZNF697Q5TEC3 545 aa21.14■□□□□ 0.97
EXOSC3-202ENST00000396521 DDRGK1Q96HY6 314 aa21.14■□□□□ 0.97
EXOSC3-202ENST00000396521 ATP11BQ9Y2G3 1177 aa21.14■□□□□ 0.97
EXOSC3-202ENST00000396521 WDR46O15213 610 aaKnown RBP21.13■□□□□ 0.97
EXOSC3-202ENST00000396521 IFIT2P09913 472 aaKnown RBP21.13■□□□□ 0.97
EXOSC3-202ENST00000396521 COPB2P35606 906 aa21.13■□□□□ 0.97
EXOSC3-202ENST00000396521 PLS1Q14651 629 aa21.13■□□□□ 0.97
EXOSC3-202ENST00000396521 NCAPG2Q86XI2 1143 aa21.13■□□□□ 0.97
EXOSC3-202ENST00000396521 RPAP2Q8IXW5 612 aaPredicted RBP21.13■□□□□ 0.97
EXOSC3-202ENST00000396521 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.13■□□□□ 0.97
EXOSC3-202ENST00000396521 VCPKMTQ9H867 229 aa21.13■□□□□ 0.97
EXOSC3-202ENST00000396521 TCRBV5S4A2TA0A5A2 114 aa21.12■□□□□ 0.97
EXOSC3-202ENST00000396521 GOLIM4O00461 696 aa21.12■□□□□ 0.97
EXOSC3-202ENST00000396521 COBLO75128 1261 aa21.12■□□□□ 0.97
EXOSC3-202ENST00000396521 ICA1Q05084 483 aa21.12■□□□□ 0.97
EXOSC3-202ENST00000396521 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.12■□□□□ 0.97
EXOSC3-202ENST00000396521 MAML3Q96JK9 1138 aa21.12■□□□□ 0.97
EXOSC3-202ENST00000396521 IL1RAPL2Q9NP60 686 aa21.12■□□□□ 0.97
EXOSC3-202ENST00000396521 DIS3Q9Y2L1 958 aaKnown RBP21.12■□□□□ 0.97
EXOSC3-202ENST00000396521 MYO5AQ9Y4I1 1855 aaKnown RBP21.11■□□□□ 0.97
EXOSC3-202ENST00000396521 ZNF236Q9UL36 1845 aa21.11■□□□□ 0.97
EXOSC3-202ENST00000396521 RAB11FIP3O75154 756 aa21.11■□□□□ 0.97
EXOSC3-202ENST00000396521 SDR42E1Q8WUS8 393 aa21.11■□□□□ 0.97
EXOSC3-202ENST00000396521 GUCD1Q96NT3 240 aa21.11■□□□□ 0.97
EXOSC3-202ENST00000396521 CHMP4BQ9H444 224 aaKnown RBP21.11■□□□□ 0.97
EXOSC3-202ENST00000396521 KANSL2Q9H9L4 492 aa21.11■□□□□ 0.97
EXOSC3-202ENST00000396521 ADAMTS5Q9UNA0 930 aa21.11■□□□□ 0.97
EXOSC3-202ENST00000396521 RARBP10826 455 aa21.1■□□□□ 0.97
EXOSC3-202ENST00000396521 SMAD3P84022 425 aaKnown RBP21.1■□□□□ 0.97
EXOSC3-202ENST00000396521 LRRC41Q15345 812 aa21.1■□□□□ 0.97
EXOSC3-202ENST00000396521 RNF180Q86T96 592 aa21.1■□□□□ 0.97
EXOSC3-202ENST00000396521 LCORLQ8N3X6 602 aa21.1■□□□□ 0.97
EXOSC3-202ENST00000396521 DNAJC2Q99543 621 aaKnown RBP21.1■□□□□ 0.97
EXOSC3-202ENST00000396521 TACC3Q9Y6A5 838 aa21.1■□□□□ 0.97
EXOSC3-202ENST00000396521 LAMA2P24043 3122 aaKnown RBP21.1■□□□□ 0.97
EXOSC3-202ENST00000396521 ADCYAP1R1P41586 468 aa21.09■□□□□ 0.97
EXOSC3-202ENST00000396521 KCTD2Q14681 263 aa21.09■□□□□ 0.97
EXOSC3-202ENST00000396521 C12orf60Q5U649 245 aa21.09■□□□□ 0.97
EXOSC3-202ENST00000396521 RIOX2Q8IUF8 465 aa21.09■□□□□ 0.97
EXOSC3-202ENST00000396521 SIAH1Q8IUQ4 282 aa21.09■□□□□ 0.97
EXOSC3-202ENST00000396521 ATG4CQ96DT6 458 aa21.09■□□□□ 0.97
EXOSC3-202ENST00000396521 GOPCQ9HD26 462 aa21.09■□□□□ 0.97
EXOSC3-202ENST00000396521 PRDM5Q9NQX1 630 aaPredicted RBP21.09■□□□□ 0.97
EXOSC3-202ENST00000396521 PAG1Q9NWQ8 432 aa21.09■□□□□ 0.97
EXOSC3-202ENST00000396521 PHF24Q9UPV7 400 aa21.09■□□□□ 0.97
EXOSC3-202ENST00000396521 HNRNPUQ00839 825 aaKnown RBP eCLIP21.08■□□□□ 0.97
EXOSC3-202ENST00000396521 SHHQ15465 462 aa21.08■□□□□ 0.97
EXOSC3-202ENST00000396521 TRIM60Q495X7 471 aa21.08■□□□□ 0.97
EXOSC3-202ENST00000396521 MSL3Q8N5Y2 521 aaKnown RBP21.08■□□□□ 0.97
EXOSC3-202ENST00000396521 MMP19Q99542 508 aa21.08■□□□□ 0.97
EXOSC3-202ENST00000396521 ARMT1Q9H993 441 aa21.08■□□□□ 0.97
EXOSC3-202ENST00000396521 XPNPEP3Q9NQH7 507 aa21.08■□□□□ 0.97
EXOSC3-202ENST00000396521 UNC80Q8N2C7 3258 aa21.08■□□□□ 0.96
EXOSC3-202ENST00000396521 TMEM265A0A087WTH1 108 aa21.07■□□□□ 0.96
EXOSC3-202ENST00000396521 MYCNP04198 464 aaPredicted RBP21.07■□□□□ 0.96
EXOSC3-202ENST00000396521 ATP5JP18859 108 aa21.07■□□□□ 0.96
EXOSC3-202ENST00000396521 ADD2P35612 726 aa21.07■□□□□ 0.96
EXOSC3-202ENST00000396521 CDK8P49336 464 aa21.07■□□□□ 0.96
EXOSC3-202ENST00000396521 TMEM132BQ14DG7 1078 aa21.07■□□□□ 0.96
EXOSC3-202ENST00000396521 UBE3CQ15386 1083 aa21.07■□□□□ 0.96
EXOSC3-202ENST00000396521 KIAA1755Q5JYT7 1200 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms