RNA–Protein interactions for RNA: ENST00000393879.3

NKIRAS2-203, Transcript of NFKB inhibitor interacting Ras like 2, humanhuman

TSL 1 (best)

Gene NKIRAS2, Length 4,213 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKIRAS2-203ENST00000393879 GPCPD1Q9NPB8 672 aa11.18□□□□□ -0.62
NKIRAS2-203ENST00000393879 DCP1AQ9NPI6 582 aaPredicted RBP11.18□□□□□ -0.62
NKIRAS2-203ENST00000393879 PRDM10Q9NQV6 1147 aa11.18□□□□□ -0.62
NKIRAS2-203ENST00000393879 KLRF2D3W0D1 207 aa11.18□□□□□ -0.62
NKIRAS2-203ENST00000393879 CYP2D6P10635 497 aa11.18□□□□□ -0.62
NKIRAS2-203ENST00000393879 TRIM21P19474 475 aaKnown RBP11.18□□□□□ -0.62
NKIRAS2-203ENST00000393879 KARSQ15046 597 aaKnown RBP11.18□□□□□ -0.62
NKIRAS2-203ENST00000393879 HSP90B2PQ58FF3 399 aa11.18□□□□□ -0.62
NKIRAS2-203ENST00000393879 JAKMIP3Q5VZ66 844 aa11.18□□□□□ -0.62
NKIRAS2-203ENST00000393879 CTR9Q6PD62 1173 aa11.18□□□□□ -0.62
NKIRAS2-203ENST00000393879 SHC4Q6S5L8 630 aa11.18□□□□□ -0.62
NKIRAS2-203ENST00000393879 BARGINQ6ZT62 677 aa11.18□□□□□ -0.62
NKIRAS2-203ENST00000393879 ENGASEQ8NFI3 743 aa11.18□□□□□ -0.62
NKIRAS2-203ENST00000393879 OXER1Q8TDS5 423 aa11.18□□□□□ -0.62
NKIRAS2-203ENST00000393879 LRRC27Q9C0I9 530 aa11.18□□□□□ -0.62
NKIRAS2-203ENST00000393879 PARP3Q9Y6F1 533 aa11.18□□□□□ -0.62
NKIRAS2-203ENST00000393879 TCHHQ07283 1943 aa11.18□□□□□ -0.62
NKIRAS2-203ENST00000393879 GOLGA8HP0CJ92 632 aa11.17□□□□□ -0.62
NKIRAS2-203ENST00000393879 U2AF2P26368 475 aaKnown RBP eCLIP11.17□□□□□ -0.62
NKIRAS2-203ENST00000393879 UBXN1Q04323 297 aa11.17□□□□□ -0.62
NKIRAS2-203ENST00000393879 PAK1Q13153 545 aa11.17□□□□□ -0.62
NKIRAS2-203ENST00000393879 ARID5BQ14865 1188 aa11.17□□□□□ -0.62
NKIRAS2-203ENST00000393879 SPA17Q15506 151 aa11.17□□□□□ -0.62
NKIRAS2-203ENST00000393879 TMTC3Q6ZXV5 915 aa11.17□□□□□ -0.62
NKIRAS2-203ENST00000393879 CNGA4Q8IV77 575 aa11.17□□□□□ -0.62
NKIRAS2-203ENST00000393879 VGLL2Q8N8G2 317 aa11.17□□□□□ -0.62
NKIRAS2-203ENST00000393879 DYNLL2Q96FJ2 89 aa11.17□□□□□ -0.62
NKIRAS2-203ENST00000393879 LUC7LQ9NQ29 371 aaKnown RBP11.17□□□□□ -0.62
NKIRAS2-203ENST00000393879 KDM4FA0A1W2PPD8 638 aa11.17□□□□□ -0.62
NKIRAS2-203ENST00000393879 ERLIN1O75477 346 aa11.17□□□□□ -0.62
NKIRAS2-203ENST00000393879 ATP1A3P13637 1013 aa11.17□□□□□ -0.62
NKIRAS2-203ENST00000393879 KRT79Q5XKE5 535 aa11.17□□□□□ -0.62
NKIRAS2-203ENST00000393879 SRRTQ9BXP5 876 aaKnown RBP11.17□□□□□ -0.62
NKIRAS2-203ENST00000393879 MAN1B1Q9UKM7 699 aa11.17□□□□□ -0.62
NKIRAS2-203ENST00000393879 NHSL1Q5SYE7 1610 aa11.17□□□□□ -0.62
NKIRAS2-203ENST00000393879 SERPINB2P05120 415 aa11.17□□□□□ -0.62
NKIRAS2-203ENST00000393879 TRAPPC10P48553 1259 aa11.17□□□□□ -0.62
NKIRAS2-203ENST00000393879 INF2Q27J81 1249 aa11.17□□□□□ -0.62
NKIRAS2-203ENST00000393879 CCDC144BQ3MJ40 725 aa11.17□□□□□ -0.62
NKIRAS2-203ENST00000393879 CACNA2D4Q7Z3S7 1137 aa11.17□□□□□ -0.62
NKIRAS2-203ENST00000393879 DHX40Q8IX18 779 aaKnown RBP11.17□□□□□ -0.62
NKIRAS2-203ENST00000393879 ERO1AQ96HE7 468 aa11.17□□□□□ -0.62
NKIRAS2-203ENST00000393879 JCADQ9P266 1359 aa11.17□□□□□ -0.62
NKIRAS2-203ENST00000393879 RBM43Q6ZSC3 357 aaKnown RBP11.17□□□□□ -0.62
NKIRAS2-203ENST00000393879 NSUN4Q96CB9 384 aaKnown RBP11.17□□□□□ -0.62
NKIRAS2-203ENST00000393879 LZTFL1Q9NQ48 299 aa11.17□□□□□ -0.62
NKIRAS2-203ENST00000393879 SMCO2A6NFE2 343 aa11.16□□□□□ -0.62
NKIRAS2-203ENST00000393879 DPP8Q6V1X1 898 aaPredicted RBP11.16□□□□□ -0.62
NKIRAS2-203ENST00000393879 GPR101Q96P66 508 aaPredicted RBP11.16□□□□□ -0.62
NKIRAS2-203ENST00000393879 BPIFA3Q9BQP9 254 aa11.16□□□□□ -0.62
NKIRAS2-203ENST00000393879 ZSWIM4Q9H7M6 989 aa11.16□□□□□ -0.62
NKIRAS2-203ENST00000393879 SPTLC3Q9NUV7 552 aa11.16□□□□□ -0.62
NKIRAS2-203ENST00000393879 TCRBV5S4A2TA0A5A2 114 aa11.16□□□□□ -0.62
NKIRAS2-203ENST00000393879 SLFN14P0C7P3 912 aa11.16□□□□□ -0.62
NKIRAS2-203ENST00000393879 ADKP55263 362 aaKnown RBP11.16□□□□□ -0.62
NKIRAS2-203ENST00000393879 TXLNBQ8N3L3 684 aa11.16□□□□□ -0.62
NKIRAS2-203ENST00000393879 NOC3LQ8WTT2 800 aaKnown RBP11.16□□□□□ -0.62
NKIRAS2-203ENST00000393879 CUL5Q93034 780 aa11.16□□□□□ -0.62
NKIRAS2-203ENST00000393879 EPSTI1Q96J88 318 aa11.16□□□□□ -0.62
NKIRAS2-203ENST00000393879 CCDC94Q9BW85 323 aaPredicted RBP11.16□□□□□ -0.62
NKIRAS2-203ENST00000393879 KCNF1Q9H3M0 494 aa11.16□□□□□ -0.62
NKIRAS2-203ENST00000393879 TNS2Q63HR2 1409 aa11.16□□□□□ -0.62
NKIRAS2-203ENST00000393879 RIC1Q4ADV7 1423 aa11.16□□□□□ -0.62
NKIRAS2-203ENST00000393879 BICDL2A1A5D9 508 aa11.16□□□□□ -0.62
NKIRAS2-203ENST00000393879 NMT2O60551 498 aa11.16□□□□□ -0.62
NKIRAS2-203ENST00000393879 KIF20AO95235 890 aa11.16□□□□□ -0.62
NKIRAS2-203ENST00000393879 TXKP42681 527 aa11.16□□□□□ -0.62
NKIRAS2-203ENST00000393879 RASGRP4Q8TDF6 673 aa11.16□□□□□ -0.62
NKIRAS2-203ENST00000393879 GSDMAQ96QA5 445 aa11.16□□□□□ -0.62
NKIRAS2-203ENST00000393879 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.16□□□□□ -0.62
NKIRAS2-203ENST00000393879 SALL1Q9NSC2 1324 aa11.15□□□□□ -0.62
NKIRAS2-203ENST00000393879 PDE4DQ08499 809 aa11.15□□□□□ -0.62
NKIRAS2-203ENST00000393879 CCDC40Q4G0X9 1142 aa11.15□□□□□ -0.62
NKIRAS2-203ENST00000393879 SPATA1Q5VX52 437 aa11.15□□□□□ -0.62
NKIRAS2-203ENST00000393879 REXO1Q8N1G1 1221 aaKnown RBP11.15□□□□□ -0.62
NKIRAS2-203ENST00000393879 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.15□□□□□ -0.62
NKIRAS2-203ENST00000393879 PLCH1Q4KWH8 1693 aa11.15□□□□□ -0.62
NKIRAS2-203ENST00000393879 ERCC5P28715 1186 aaPredicted RBP11.15□□□□□ -0.62
NKIRAS2-203ENST00000393879 AXDND1Q5T1B0 1012 aaPredicted RBP11.15□□□□□ -0.62
NKIRAS2-203ENST00000393879 GALNT17Q6IS24 598 aa11.15□□□□□ -0.62
NKIRAS2-203ENST00000393879 DGKHQ86XP1 1220 aa11.15□□□□□ -0.62
NKIRAS2-203ENST00000393879 ZNF579Q8NAF0 562 aaKnown RBP11.15□□□□□ -0.62
NKIRAS2-203ENST00000393879 NELFBQ8WX92 580 aa11.15□□□□□ -0.62
NKIRAS2-203ENST00000393879 TTF2Q9UNY4 1162 aaKnown RBP11.15□□□□□ -0.62
NKIRAS2-203ENST00000393879 SCN11AQ9UI33 1791 aa11.15□□□□□ -0.62
NKIRAS2-203ENST00000393879 USP17L3A6NCW0 530 aa11.15□□□□□ -0.62
NKIRAS2-203ENST00000393879 USP17L4A6NCW7 530 aa11.15□□□□□ -0.62
NKIRAS2-203ENST00000393879 BBOX1O75936 387 aa11.15□□□□□ -0.62
NKIRAS2-203ENST00000393879 LONP1P36776 959 aaKnown RBP11.15□□□□□ -0.62
NKIRAS2-203ENST00000393879 MRPL12P52815 198 aaKnown RBP11.15□□□□□ -0.62
NKIRAS2-203ENST00000393879 RC3H1Q5TC82 1133 aaKnown RBP11.15□□□□□ -0.62
NKIRAS2-203ENST00000393879 TMED8Q6PL24 325 aaPredicted RBP11.15□□□□□ -0.62
NKIRAS2-203ENST00000393879 USP17L1Q7RTZ2 530 aa11.15□□□□□ -0.62
NKIRAS2-203ENST00000393879 GTPBP4Q9BZE4 634 aaKnown RBP11.15□□□□□ -0.62
NKIRAS2-203ENST00000393879 PCDHA4Q9UN74 947 aa11.15□□□□□ -0.62
NKIRAS2-203ENST00000393879 PSDA5PKW4 1024 aaPredicted RBP11.14□□□□□ -0.63
NKIRAS2-203ENST00000393879 GTPBP6O43824 516 aaPredicted RBP11.14□□□□□ -0.63
NKIRAS2-203ENST00000393879 VPS72Q15906 364 aa11.14□□□□□ -0.63
NKIRAS2-203ENST00000393879 PTPN21Q16825 1174 aa11.14□□□□□ -0.63
NKIRAS2-203ENST00000393879 SV2BQ7L1I2 683 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms