RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 GREB1LQ9C091 1923 aaPredicted RBP22.73■■□□□ 1.23
RAB5C-202ENST00000393860 SYCE3A1L190 88 aa22.73■■□□□ 1.23
RAB5C-202ENST00000393860 LIG1P18858 919 aa22.73■■□□□ 1.23
RAB5C-202ENST00000393860 ATP2B2Q01814 1243 aa22.73■■□□□ 1.23
RAB5C-202ENST00000393860 USP17L2Q6R6M4 530 aa22.73■■□□□ 1.23
RAB5C-202ENST00000393860 RGS22Q8NE09 1264 aa22.73■■□□□ 1.23
RAB5C-202ENST00000393860 MAP3K14Q99558 947 aa22.73■■□□□ 1.23
RAB5C-202ENST00000393860 CLIP2Q9UDT6 1046 aa22.73■■□□□ 1.23
RAB5C-202ENST00000393860 RCOR1Q9UKL0 485 aa22.73■■□□□ 1.23
RAB5C-202ENST00000393860 GOLGA6L3A6NEY3 463 aa22.72■■□□□ 1.23
RAB5C-202ENST00000393860 NOVP48745 357 aa22.72■■□□□ 1.23
RAB5C-202ENST00000393860 NR5A1Q13285 461 aa22.72■■□□□ 1.23
RAB5C-202ENST00000393860 SAFBQ15424 915 aaKnown RBP eCLIP22.72■■□□□ 1.23
RAB5C-202ENST00000393860 SPDYE2Q495Y8 402 aa22.72■■□□□ 1.23
RAB5C-202ENST00000393860 CSRNP1Q96S65 589 aa22.72■■□□□ 1.23
RAB5C-202ENST00000393860 USP17L5A8MUK1 530 aa22.72■■□□□ 1.23
RAB5C-202ENST00000393860 U2AF2P26368 475 aaKnown RBP eCLIP22.72■■□□□ 1.23
RAB5C-202ENST00000393860 ATL3Q6DD88 541 aa22.72■■□□□ 1.23
RAB5C-202ENST00000393860 BICD2Q8TD16 824 aa22.72■■□□□ 1.23
RAB5C-202ENST00000393860 RTEL1Q9NZ71 1219 aa22.72■■□□□ 1.23
RAB5C-202ENST00000393860 SCAF8Q9UPN6 1271 aaKnown RBP22.72■■□□□ 1.23
RAB5C-202ENST00000393860 GJA3Q9Y6H8 435 aa22.72■■□□□ 1.23
RAB5C-202ENST00000393860 ATRNL1Q5VV63 1379 aa22.72■■□□□ 1.23
RAB5C-202ENST00000393860 LTBP3Q9NS15 1303 aa22.71■■□□□ 1.23
RAB5C-202ENST00000393860 CNTNAP1P78357 1384 aa22.71■■□□□ 1.23
RAB5C-202ENST00000393860 PALM3A6NDB9 673 aaPredicted RBP22.71■■□□□ 1.23
RAB5C-202ENST00000393860 GDF11O95390 407 aa22.71■■□□□ 1.23
RAB5C-202ENST00000393860 PARP1P09874 1014 aaKnown RBP22.71■■□□□ 1.23
RAB5C-202ENST00000393860 TNIP1Q15025 636 aa22.71■■□□□ 1.23
RAB5C-202ENST00000393860 NBPF9Q3BBW0 867 aa22.71■■□□□ 1.23
RAB5C-202ENST00000393860 CERKLQ49MI3 558 aaPredicted RBP22.71■■□□□ 1.23
RAB5C-202ENST00000393860 RBM26Q5T8P6 1007 aaKnown RBP22.71■■□□□ 1.23
RAB5C-202ENST00000393860 SYAP1Q96A49 352 aaPredicted RBP22.71■■□□□ 1.23
RAB5C-202ENST00000393860 FRMPD2Q68DX3 1309 aaPredicted RBP22.71■■□□□ 1.23
RAB5C-202ENST00000393860 MYH4Q9Y623 1939 aa22.71■■□□□ 1.23
RAB5C-202ENST00000393860 CYTH3O43739 400 aa22.7■■□□□ 1.23
RAB5C-202ENST00000393860 SCG2P13521 617 aa22.7■■□□□ 1.23
RAB5C-202ENST00000393860 STK38Q15208 465 aa22.7■■□□□ 1.23
RAB5C-202ENST00000393860 GPKOWQ92917 476 aaPredicted RBP eCLIP22.7■■□□□ 1.23
RAB5C-202ENST00000393860 MYOZ2Q9NPC6 264 aa22.7■■□□□ 1.23
RAB5C-202ENST00000393860 FSD2A1L4K1 749 aa22.7■■□□□ 1.22
RAB5C-202ENST00000393860 KLRF2D3W0D1 207 aa22.7■■□□□ 1.22
RAB5C-202ENST00000393860 TTLL1O95922 423 aa22.7■■□□□ 1.22
RAB5C-202ENST00000393860 XBP1P17861 261 aa22.7■■□□□ 1.22
RAB5C-202ENST00000393860 GNAQP50148 359 aa22.7■■□□□ 1.22
RAB5C-202ENST00000393860 ZNF445P59923 1031 aa22.7■■□□□ 1.22
RAB5C-202ENST00000393860 PFKFB3Q16875 520 aaPredicted RBP22.7■■□□□ 1.22
RAB5C-202ENST00000393860 FOXP4Q8IVH2 680 aaPredicted RBP22.7■■□□□ 1.22
RAB5C-202ENST00000393860 NOSTRINQ8IVI9 506 aa22.7■■□□□ 1.22
RAB5C-202ENST00000393860 CDAN1Q8IWY9 1227 aa22.7■■□□□ 1.22
RAB5C-202ENST00000393860 PHF20Q9BVI0 1012 aa22.7■■□□□ 1.22
RAB5C-202ENST00000393860 FHDC1Q9C0D6 1143 aaPredicted RBP22.7■■□□□ 1.22
RAB5C-202ENST00000393860 EGFRP00533 1210 aa22.69■■□□□ 1.22
RAB5C-202ENST00000393860 ME1P48163 572 aa22.69■■□□□ 1.22
RAB5C-202ENST00000393860 ANO1Q5XXA6 986 aa22.69■■□□□ 1.22
RAB5C-202ENST00000393860 LINC00301Q8NCQ3 95 aa22.69■■□□□ 1.22
RAB5C-202ENST00000393860 CCDC17Q96LX7 622 aa22.69■■□□□ 1.22
RAB5C-202ENST00000393860 WNT10BO00744 389 aa22.69■■□□□ 1.22
RAB5C-202ENST00000393860 GMPSP49915 693 aaPredicted RBP22.69■■□□□ 1.22
RAB5C-202ENST00000393860 CCDC183Q5T5S1 534 aa22.69■■□□□ 1.22
RAB5C-202ENST00000393860 TATDN1Q6P1N9 297 aa22.69■■□□□ 1.22
RAB5C-202ENST00000393860 MTMR14Q8NCE2 650 aa22.69■■□□□ 1.22
RAB5C-202ENST00000393860 TMEM39BQ9GZU3 492 aa22.69■■□□□ 1.22
RAB5C-202ENST00000393860 POLR3EQ9NVU0 708 aa22.69■■□□□ 1.22
RAB5C-202ENST00000393860 COL2A1P02458 1487 aaPredicted RBP22.68■■□□□ 1.22
RAB5C-202ENST00000393860 FAM205CA6NFA0 338 aa22.68■■□□□ 1.22
RAB5C-202ENST00000393860 PDHBP11177 359 aa22.68■■□□□ 1.22
RAB5C-202ENST00000393860 JAG1P78504 1218 aa22.68■■□□□ 1.22
RAB5C-202ENST00000393860 RRP1BQ14684 758 aaKnown RBP22.68■■□□□ 1.22
RAB5C-202ENST00000393860 SF3A1Q15459 793 aaKnown RBP22.68■■□□□ 1.22
RAB5C-202ENST00000393860 FAM151AQ8WW52 585 aa22.68■■□□□ 1.22
RAB5C-202ENST00000393860 ZBED3Q96IU2 234 aaPredicted RBP22.68■■□□□ 1.22
RAB5C-202ENST00000393860 FOXP1Q9H334 677 aaPredicted RBP22.68■■□□□ 1.22
RAB5C-202ENST00000393860 ZNF541Q9H0D2 1346 aa22.68■■□□□ 1.22
RAB5C-202ENST00000393860 KRT2P35908 639 aa22.67■■□□□ 1.22
RAB5C-202ENST00000393860 NASPP49321 788 aaPredicted RBP22.67■■□□□ 1.22
RAB5C-202ENST00000393860 SEPT2Q15019 361 aa22.67■■□□□ 1.22
RAB5C-202ENST00000393860 ARHGAP27Q6ZUM4 889 aa22.67■■□□□ 1.22
RAB5C-202ENST00000393860 UBA5Q9GZZ9 404 aa22.67■■□□□ 1.22
RAB5C-202ENST00000393860 VAT1LQ9HCJ6 419 aa22.67■■□□□ 1.22
RAB5C-202ENST00000393860 ADAMTS3O15072 1205 aa22.67■■□□□ 1.22
RAB5C-202ENST00000393860 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.67■■□□□ 1.22
RAB5C-202ENST00000393860 GPCPD1Q9NPB8 672 aa22.67■■□□□ 1.22
RAB5C-202ENST00000393860 PCDHA7Q9UN72 937 aa22.67■■□□□ 1.22
RAB5C-202ENST00000393860 FZD9O00144 591 aa22.66■■□□□ 1.22
RAB5C-202ENST00000393860 SPTLC2O15270 562 aa22.66■■□□□ 1.22
RAB5C-202ENST00000393860 MYO1BO43795 1136 aa22.66■■□□□ 1.22
RAB5C-202ENST00000393860 RAD21O60216 631 aa22.66■■□□□ 1.22
RAB5C-202ENST00000393860 YEATS4O95619 227 aa22.66■■□□□ 1.22
RAB5C-202ENST00000393860 EEF2P13639 858 aaKnown RBP22.66■■□□□ 1.22
RAB5C-202ENST00000393860 NLRP5P59047 1200 aa22.66■■□□□ 1.22
RAB5C-202ENST00000393860 NPY5RQ15761 445 aa22.66■■□□□ 1.22
RAB5C-202ENST00000393860 ABCB5Q2M3G0 1257 aa22.66■■□□□ 1.22
RAB5C-202ENST00000393860 NOM1Q5C9Z4 860 aaKnown RBP22.66■■□□□ 1.22
RAB5C-202ENST00000393860 EARS2Q5JPH6 523 aaKnown RBP22.66■■□□□ 1.22
RAB5C-202ENST00000393860 METTL16Q86W50 562 aaKnown RBP22.66■■□□□ 1.22
RAB5C-202ENST00000393860 HOMER1Q86YM7 354 aa22.66■■□□□ 1.22
RAB5C-202ENST00000393860 MICALL2Q8IY33 904 aa22.66■■□□□ 1.22
RAB5C-202ENST00000393860 GOLPH3LQ9H4A5 285 aa22.66■■□□□ 1.22
RAB5C-202ENST00000393860 ATP2B1P20020 1258 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms