RNA–Protein interactions for RNA: ENST00000390425.2

TRAV3-201, Transcript of T cell receptor alpha variable 3 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV3, Length 519 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3-201ENST00000390425 PTPREP23469 700 aa13.35□□□□□ -0.27
TRAV3-201ENST00000390425 GRB14Q14449 540 aa13.35□□□□□ -0.27
TRAV3-201ENST00000390425 LHX8Q68G74 356 aa13.35□□□□□ -0.27
TRAV3-201ENST00000390425 SIAH1Q8IUQ4 282 aa13.35□□□□□ -0.27
TRAV3-201ENST00000390425 TRMT44Q8IYL2 757 aaKnown RBP13.35□□□□□ -0.27
TRAV3-201ENST00000390425 C7orf61Q8IZ16 206 aa13.35□□□□□ -0.27
TRAV3-201ENST00000390425 HAUS7Q99871 368 aa13.35□□□□□ -0.27
TRAV3-201ENST00000390425 NBPF3Q9H094 633 aa13.35□□□□□ -0.27
TRAV3-201ENST00000390425 LTBP2Q14767 1821 aa13.34□□□□□ -0.27
TRAV3-201ENST00000390425 MPHOSPH10O00566 681 aaKnown RBP13.34□□□□□ -0.27
TRAV3-201ENST00000390425 SOX1O00570 391 aaPredicted RBP13.34□□□□□ -0.27
TRAV3-201ENST00000390425 IGHA2P01877 340 aa13.34□□□□□ -0.27
TRAV3-201ENST00000390425 HOXC6P09630 235 aa13.34□□□□□ -0.27
TRAV3-201ENST00000390425 AKR1B1P15121 316 aa13.34□□□□□ -0.27
TRAV3-201ENST00000390425 CCNA1P78396 465 aa13.34□□□□□ -0.27
TRAV3-201ENST00000390425 CCAR1Q8IX12 1150 aaKnown RBP13.34□□□□□ -0.27
TRAV3-201ENST00000390425 NPLOC4Q8TAT6 608 aa13.34□□□□□ -0.27
TRAV3-201ENST00000390425 GDF15Q99988 308 aa13.34□□□□□ -0.27
TRAV3-201ENST00000390425 C11orf49Q9H6J7 331 aa13.34□□□□□ -0.27
TRAV3-201ENST00000390425 STAP2Q9UGK3 403 aa13.34□□□□□ -0.27
TRAV3-201ENST00000390425 ZMYND8Q9ULU4 1186 aaPredicted RBP13.34□□□□□ -0.27
TRAV3-201ENST00000390425 COL6A3P12111 3177 aa13.33□□□□□ -0.28
TRAV3-201ENST00000390425 A0A1W2PPC1 479 aa13.33□□□□□ -0.28
TRAV3-201ENST00000390425 SLC15A5A6NIM6 579 aa13.33□□□□□ -0.28
TRAV3-201ENST00000390425 SMARCA5O60264 1052 aaPredicted RBP13.33□□□□□ -0.28
TRAV3-201ENST00000390425 C12orf60Q5U649 245 aa13.33□□□□□ -0.28
TRAV3-201ENST00000390425 WDR78Q5VTH9 848 aa13.33□□□□□ -0.28
TRAV3-201ENST00000390425 TMEM179Q6ZVK1 233 aa13.33□□□□□ -0.28
TRAV3-201ENST00000390425 MOV10L1Q9BXT6 1211 aaKnown RBP13.33□□□□□ -0.28
TRAV3-201ENST00000390425 ATP8A2Q9NTI2 1148 aa13.33□□□□□ -0.28
TRAV3-201ENST00000390425 SWAP70Q9UH65 585 aa13.33□□□□□ -0.28
TRAV3-201ENST00000390425 UBE3CQ15386 1083 aa13.32□□□□□ -0.28
TRAV3-201ENST00000390425 TRPV1Q8NER1 839 aa13.32□□□□□ -0.28
TRAV3-201ENST00000390425 TANGO6Q9C0B7 1094 aa13.32□□□□□ -0.28
TRAV3-201ENST00000390425 PUS7LQ9H0K6 701 aaKnown RBP13.32□□□□□ -0.28
TRAV3-201ENST00000390425 CWC22Q9HCG8 908 aaKnown RBP13.32□□□□□ -0.28
TRAV3-201ENST00000390425 MCM3APO60318 1980 aa13.31□□□□□ -0.28
TRAV3-201ENST00000390425 USP17L12C9JPN9 530 aa13.31□□□□□ -0.28
TRAV3-201ENST00000390425 USP17L21D6R901 530 aa13.31□□□□□ -0.28
TRAV3-201ENST00000390425 GLRX3O76003 335 aaKnown RBP13.31□□□□□ -0.28
TRAV3-201ENST00000390425 SYN1P17600 705 aa13.31□□□□□ -0.28
TRAV3-201ENST00000390425 CYP2C19P33261 490 aa13.31□□□□□ -0.28
TRAV3-201ENST00000390425 CDK8P49336 464 aa13.31□□□□□ -0.28
TRAV3-201ENST00000390425 ICA1Q05084 483 aa13.31□□□□□ -0.28
TRAV3-201ENST00000390425 COG2Q14746 738 aa13.31□□□□□ -0.28
TRAV3-201ENST00000390425 C16orf86Q6ZW13 317 aa13.31□□□□□ -0.28
TRAV3-201ENST00000390425 LRCH3Q96II8 777 aa13.31□□□□□ -0.28
TRAV3-201ENST00000390425 LRRCC1Q9C099 1032 aa13.31□□□□□ -0.28
TRAV3-201ENST00000390425 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.31□□□□□ -0.28
TRAV3-201ENST00000390425 SPATC1LQ9H0A9 340 aa13.31□□□□□ -0.28
TRAV3-201ENST00000390425 TMX2Q9Y320 296 aa13.31□□□□□ -0.28
TRAV3-201ENST00000390425 CYBAP13498 195 aa13.3□□□□□ -0.28
TRAV3-201ENST00000390425 DSG3P32926 999 aa13.3□□□□□ -0.28
TRAV3-201ENST00000390425 BMP8BP34820 402 aa13.3□□□□□ -0.28
TRAV3-201ENST00000390425 LRRC26Q2I0M4 334 aa13.3□□□□□ -0.28
TRAV3-201ENST00000390425 MFSD14CQ5VZR4 134 aa13.3□□□□□ -0.28
TRAV3-201ENST00000390425 SPICE1Q8N0Z3 855 aa13.3□□□□□ -0.28
TRAV3-201ENST00000390425 SHCBP1Q8NEM2 672 aa13.3□□□□□ -0.28
TRAV3-201ENST00000390425 LPAR1Q92633 364 aa13.3□□□□□ -0.28
TRAV3-201ENST00000390425 ATG4CQ96DT6 458 aa13.3□□□□□ -0.28
TRAV3-201ENST00000390425 CHMP4BQ9H444 224 aaKnown RBP13.3□□□□□ -0.28
TRAV3-201ENST00000390425 VCPKMTQ9H867 229 aa13.3□□□□□ -0.28
TRAV3-201ENST00000390425 IVNS1ABPQ9Y6Y0 642 aa13.3□□□□□ -0.28
TRAV3-201ENST00000390425 COBLO75128 1261 aa13.29□□□□□ -0.28
TRAV3-201ENST00000390425 ERCC3P19447 782 aa13.29□□□□□ -0.28
TRAV3-201ENST00000390425 ADORA2AP29274 412 aa13.29□□□□□ -0.28
TRAV3-201ENST00000390425 MAGEA10P43363 369 aaPredicted RBP13.29□□□□□ -0.28
TRAV3-201ENST00000390425 TSHZ3Q63HK5 1081 aa13.29□□□□□ -0.28
TRAV3-201ENST00000390425 CTR9Q6PD62 1173 aa13.29□□□□□ -0.28
TRAV3-201ENST00000390425 CCDC17Q96LX7 622 aa13.29□□□□□ -0.28
TRAV3-201ENST00000390425 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.29□□□□□ -0.28
TRAV3-201ENST00000390425 ARHGEF10LQ9HCE6 1279 aa13.29□□□□□ -0.28
TRAV3-201ENST00000390425 HOXC10Q9NYD6 342 aa13.29□□□□□ -0.28
TRAV3-201ENST00000390425 DDX20Q9UHI6 824 aaKnown RBP13.29□□□□□ -0.28
TRAV3-201ENST00000390425 SLC4A4Q9Y6R1 1079 aa13.29□□□□□ -0.28
TRAV3-201ENST00000390425 ROBO3Q96MS0 1386 aa13.29□□□□□ -0.28
TRAV3-201ENST00000390425 LAMA2P24043 3122 aaKnown RBP13.28□□□□□ -0.28
TRAV3-201ENST00000390425 WDR46O15213 610 aaKnown RBP13.28□□□□□ -0.28
TRAV3-201ENST00000390425 FLOT1O75955 427 aa13.28□□□□□ -0.28
TRAV3-201ENST00000390425 EEF2P13639 858 aaKnown RBP13.28□□□□□ -0.28
TRAV3-201ENST00000390425 ATP2B2Q01814 1243 aa13.28□□□□□ -0.28
TRAV3-201ENST00000390425 OLFML2BQ68BL8 750 aa13.28□□□□□ -0.28
TRAV3-201ENST00000390425 MB21D1Q8N884 522 aa13.28□□□□□ -0.28
TRAV3-201ENST00000390425 ECHDC1Q9NTX5 307 aa13.28□□□□□ -0.28
TRAV3-201ENST00000390425 FBXO28Q9NVF7 368 aa13.28□□□□□ -0.28
TRAV3-201ENST00000390425 TMEM132BQ14DG7 1078 aa13.27□□□□□ -0.29
TRAV3-201ENST00000390425 KBTBD3Q8NAB2 608 aa13.27□□□□□ -0.29
TRAV3-201ENST00000390425 OSBP2Q969R2 916 aa13.27□□□□□ -0.29
TRAV3-201ENST00000390425 STRBPQ96SI9 672 aaKnown RBP13.27□□□□□ -0.29
TRAV3-201ENST00000390425 DCTPP1Q9H773 170 aa13.27□□□□□ -0.29
TRAV3-201ENST00000390425 SH2D4AQ9H788 454 aa13.27□□□□□ -0.29
TRAV3-201ENST00000390425 EPB41L4AQ9HCS5 686 aaPredicted RBP13.27□□□□□ -0.29
TRAV3-201ENST00000390425 ARPP21Q9UBL0 812 aaPredicted RBP13.27□□□□□ -0.29
TRAV3-201ENST00000390425 ADAMTS5Q9UNA0 930 aa13.27□□□□□ -0.29
TRAV3-201ENST00000390425 GSG1L2A8MUP6 293 aa13.26□□□□□ -0.29
TRAV3-201ENST00000390425 STRNO43815 780 aa13.26□□□□□ -0.29
TRAV3-201ENST00000390425 MSCO60682 206 aa13.26□□□□□ -0.29
TRAV3-201ENST00000390425 RASA1P20936 1047 aa13.26□□□□□ -0.29
TRAV3-201ENST00000390425 CNGA1P29973 690 aa13.26□□□□□ -0.29
TRAV3-201ENST00000390425 PLS1Q14651 629 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms