RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 TMEM179Q6ZVK1 233 aa17.04■□□□□ 0.32
SHOX-202ENST00000381575 STK11IPQ8N1F8 1099 aa17.04■□□□□ 0.32
SHOX-202ENST00000381575 APBA2Q99767 749 aa17.04■□□□□ 0.32
SHOX-202ENST00000381575 ECHDC1Q9NTX5 307 aa17.04■□□□□ 0.32
SHOX-202ENST00000381575 PCDH10Q9P2E7 1040 aa17.04■□□□□ 0.32
SHOX-202ENST00000381575 RBM27Q9P2N5 1060 aaKnown RBP17.04■□□□□ 0.32
SHOX-202ENST00000381575 SWAP70Q9UH65 585 aa17.04■□□□□ 0.32
SHOX-202ENST00000381575 MYH4Q9Y623 1939 aa17.04■□□□□ 0.32
SHOX-202ENST00000381575 EVI5O60447 810 aa17.03■□□□□ 0.32
SHOX-202ENST00000381575 XRCC5P13010 732 aaKnown RBP17.03■□□□□ 0.32
SHOX-202ENST00000381575 MNX1P50219 401 aaPredicted RBP17.03■□□□□ 0.32
SHOX-202ENST00000381575 CCNA1P78396 465 aa17.03■□□□□ 0.32
SHOX-202ENST00000381575 ATP2B2Q01814 1243 aa17.03■□□□□ 0.32
SHOX-202ENST00000381575 ICA1Q05084 483 aa17.03■□□□□ 0.32
SHOX-202ENST00000381575 MAP2K5Q13163 448 aa17.03■□□□□ 0.32
SHOX-202ENST00000381575 NECAB2Q7Z6G3 386 aa17.03■□□□□ 0.32
SHOX-202ENST00000381575 SIAH1Q8IUQ4 282 aa17.03■□□□□ 0.32
SHOX-202ENST00000381575 FLRT1Q9NZU1 646 aa17.03■□□□□ 0.32
SHOX-202ENST00000381575 GREB1LQ9C091 1923 aaPredicted RBP17.03■□□□□ 0.32
SHOX-202ENST00000381575 CTR9Q6PD62 1173 aa17.02■□□□□ 0.32
SHOX-202ENST00000381575 C16orf86Q6ZW13 317 aa17.02■□□□□ 0.32
SHOX-202ENST00000381575 DCTPP1Q9H773 170 aa17.02■□□□□ 0.32
SHOX-202ENST00000381575 PCDHB15Q9Y5E8 787 aa17.02■□□□□ 0.32
SHOX-202ENST00000381575 NR2E3Q9Y5X4 410 aa17.02■□□□□ 0.32
SHOX-202ENST00000381575 PTPREP23469 700 aa17.02■□□□□ 0.31
SHOX-202ENST00000381575 ZSCAN25Q6NSZ9 544 aa17.02■□□□□ 0.31
SHOX-202ENST00000381575 LBX2Q6XYB7 198 aa17.02■□□□□ 0.31
SHOX-202ENST00000381575 AMOTL1Q8IY63 956 aa17.02■□□□□ 0.31
SHOX-202ENST00000381575 C7orf61Q8IZ16 206 aa17.02■□□□□ 0.31
SHOX-202ENST00000381575 OTUD7AQ8TE49 926 aaPredicted RBP17.02■□□□□ 0.31
SHOX-202ENST00000381575 COG2Q14746 738 aa17.01■□□□□ 0.31
SHOX-202ENST00000381575 KBTBD3Q8NAB2 608 aa17.01■□□□□ 0.31
SHOX-202ENST00000381575 NPLOC4Q8TAT6 608 aa17.01■□□□□ 0.31
SHOX-202ENST00000381575 OSBP2Q969R2 916 aa17.01■□□□□ 0.31
SHOX-202ENST00000381575 ATG4CQ96DT6 458 aa17.01■□□□□ 0.31
SHOX-202ENST00000381575 DDRGK1Q96HY6 314 aa17.01■□□□□ 0.31
SHOX-202ENST00000381575 STRBPQ96SI9 672 aaKnown RBP17.01■□□□□ 0.31
SHOX-202ENST00000381575 MOV10L1Q9BXT6 1211 aaKnown RBP17.01■□□□□ 0.31
SHOX-202ENST00000381575 ARHGEF10LQ9HCE6 1279 aa17.01■□□□□ 0.31
SHOX-202ENST00000381575 OGDHLQ9ULD0 1010 aa17.01■□□□□ 0.31
SHOX-202ENST00000381575 IVNS1ABPQ9Y6Y0 642 aa17.01■□□□□ 0.31
SHOX-202ENST00000381575 ZNF236Q9UL36 1845 aa17.01■□□□□ 0.31
SHOX-202ENST00000381575 SMCHD1A6NHR9 2005 aa17■□□□□ 0.31
SHOX-202ENST00000381575 PLXNA1Q9UIW2 1896 aa17■□□□□ 0.31
SHOX-202ENST00000381575 SLC15A5A6NIM6 579 aa17■□□□□ 0.31
SHOX-202ENST00000381575 RAD21O60216 631 aa17■□□□□ 0.31
SHOX-202ENST00000381575 FLOT1O75955 427 aa17■□□□□ 0.31
SHOX-202ENST00000381575 GLRX3O76003 335 aaKnown RBP17■□□□□ 0.31
SHOX-202ENST00000381575 EEF2P13639 858 aaKnown RBP17■□□□□ 0.31
SHOX-202ENST00000381575 GRB14Q14449 540 aa17■□□□□ 0.31
SHOX-202ENST00000381575 PLS1Q14651 629 aa17■□□□□ 0.31
SHOX-202ENST00000381575 TRMT44Q8IYL2 757 aaKnown RBP17■□□□□ 0.31
SHOX-202ENST00000381575 ANKLE1Q8NAG6 615 aa17■□□□□ 0.31
SHOX-202ENST00000381575 GPATCH3Q96I76 525 aa17■□□□□ 0.31
SHOX-202ENST00000381575 NBPF3Q9H094 633 aa17■□□□□ 0.31
SHOX-202ENST00000381575 SPATC1LQ9H0A9 340 aa17■□□□□ 0.31
SHOX-202ENST00000381575 VCPKMTQ9H867 229 aa17■□□□□ 0.31
SHOX-202ENST00000381575 ZMYND8Q9ULU4 1186 aaPredicted RBP17■□□□□ 0.31
SHOX-202ENST00000381575 TMX2Q9Y320 296 aa17■□□□□ 0.31
SHOX-202ENST00000381575 PFASO15067 1338 aa16.99■□□□□ 0.31
SHOX-202ENST00000381575 GSG1L2A8MUP6 293 aa16.99■□□□□ 0.31
SHOX-202ENST00000381575 M0R2C6 588 aa16.99■□□□□ 0.31
SHOX-202ENST00000381575 CYP2C19P33261 490 aa16.99■□□□□ 0.31
SHOX-202ENST00000381575 CCDC17Q96LX7 622 aa16.99■□□□□ 0.31
SHOX-202ENST00000381575 C11orf49Q9H6J7 331 aa16.99■□□□□ 0.31
SHOX-202ENST00000381575 EPB41L4AQ9HCS5 686 aaPredicted RBP16.99■□□□□ 0.31
SHOX-202ENST00000381575 FBXO28Q9NVF7 368 aa16.99■□□□□ 0.31
SHOX-202ENST00000381575 LAMA2P24043 3122 aaKnown RBP16.98■□□□□ 0.31
SHOX-202ENST00000381575 MINDY4BA8MYZ0 360 aa16.98■□□□□ 0.31
SHOX-202ENST00000381575 RNF113AO15541 343 aaKnown RBP16.98■□□□□ 0.31
SHOX-202ENST00000381575 ERCC3P19447 782 aa16.98■□□□□ 0.31
SHOX-202ENST00000381575 ADORA2AP29274 412 aa16.98■□□□□ 0.31
SHOX-202ENST00000381575 DSG3P32926 999 aa16.98■□□□□ 0.31
SHOX-202ENST00000381575 MFSD14CQ5VZR4 134 aa16.98■□□□□ 0.31
SHOX-202ENST00000381575 LHX8Q68G74 356 aa16.98■□□□□ 0.31
SHOX-202ENST00000381575 APPBP2Q92624 585 aa16.98■□□□□ 0.31
SHOX-202ENST00000381575 LPAR1Q92633 364 aa16.98■□□□□ 0.31
SHOX-202ENST00000381575 PRO3102Q9H379 93 aa16.98■□□□□ 0.31
SHOX-202ENST00000381575 HOXC10Q9NYD6 342 aa16.98■□□□□ 0.31
SHOX-202ENST00000381575 ARPP21Q9UBL0 812 aaPredicted RBP16.98■□□□□ 0.31
SHOX-202ENST00000381575 STAP2Q9UGK3 403 aa16.98■□□□□ 0.31
SHOX-202ENST00000381575 GPAA1O43292 621 aa16.97■□□□□ 0.31
SHOX-202ENST00000381575 SYN1P17600 705 aa16.97■□□□□ 0.31
SHOX-202ENST00000381575 CNGA1P29973 690 aa16.97■□□□□ 0.31
SHOX-202ENST00000381575 RRP1P56182 461 aaKnown RBP16.97■□□□□ 0.31
SHOX-202ENST00000381575 NCAPG2Q86XI2 1143 aa16.97■□□□□ 0.31
SHOX-202ENST00000381575 TRPV1Q8NER1 839 aa16.97■□□□□ 0.31
SHOX-202ENST00000381575 SEC62Q99442 399 aaKnown RBP16.97■□□□□ 0.31
SHOX-202ENST00000381575 NUP88Q99567 741 aaPredicted RBP16.97■□□□□ 0.31
SHOX-202ENST00000381575 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.97■□□□□ 0.31
SHOX-202ENST00000381575 SH2D4AQ9H788 454 aa16.97■□□□□ 0.31
SHOX-202ENST00000381575 WDR46O15213 610 aaKnown RBP16.96■□□□□ 0.31
SHOX-202ENST00000381575 CAPN2P17655 700 aa16.96■□□□□ 0.31
SHOX-202ENST00000381575 RASA1P20936 1047 aa16.96■□□□□ 0.31
SHOX-202ENST00000381575 DPP9Q86TI2 863 aa16.96■□□□□ 0.31
SHOX-202ENST00000381575 COBLO75128 1261 aa16.95■□□□□ 0.3
SHOX-202ENST00000381575 PRDM1O75626 825 aa16.95■□□□□ 0.3
SHOX-202ENST00000381575 HOXC6P09630 235 aa16.95■□□□□ 0.3
SHOX-202ENST00000381575 TDO2P48775 406 aa16.95■□□□□ 0.3
SHOX-202ENST00000381575 TMEM132BQ14DG7 1078 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms