RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 GPC2Q8N158 579 aa9.28□□□□□ -0.92
ERCC8-202ENST00000381118 FBXO18Q8NFZ0 1043 aa9.28□□□□□ -0.92
ERCC8-202ENST00000381118 CPVLQ9H3G5 476 aa9.28□□□□□ -0.92
ERCC8-202ENST00000381118 MAD2L2Q9UI95 211 aa9.28□□□□□ -0.92
ERCC8-202ENST00000381118 V9GY48 417 aaPredicted RBP9.28□□□□□ -0.92
ERCC8-202ENST00000381118 CNTNAP5Q8WYK1 1306 aa9.28□□□□□ -0.92
ERCC8-202ENST00000381118 STK36Q9NRP7 1315 aa9.28□□□□□ -0.92
ERCC8-202ENST00000381118 ATAD5Q96QE3 1844 aa9.28□□□□□ -0.92
ERCC8-202ENST00000381118 COL2A1P02458 1487 aaPredicted RBP9.28□□□□□ -0.92
ERCC8-202ENST00000381118 TOP1P11387 765 aaKnown RBP9.28□□□□□ -0.92
ERCC8-202ENST00000381118 KIF5BP33176 963 aa9.28□□□□□ -0.92
ERCC8-202ENST00000381118 EPS15P42566 896 aa9.28□□□□□ -0.92
ERCC8-202ENST00000381118 TNNI2P48788 182 aa9.28□□□□□ -0.92
ERCC8-202ENST00000381118 RESTQ13127 1097 aa9.28□□□□□ -0.92
ERCC8-202ENST00000381118 TRIM29Q14134 588 aa9.28□□□□□ -0.92
ERCC8-202ENST00000381118 RASA3Q14644 834 aa9.28□□□□□ -0.92
ERCC8-202ENST00000381118 RRP1BQ14684 758 aaKnown RBP9.28□□□□□ -0.92
ERCC8-202ENST00000381118 SEPT2Q15019 361 aa9.28□□□□□ -0.92
ERCC8-202ENST00000381118 ABCB5Q2M3G0 1257 aa9.28□□□□□ -0.92
ERCC8-202ENST00000381118 C9orf131Q5VYM1 1079 aa9.28□□□□□ -0.92
ERCC8-202ENST00000381118 KRT40Q6A162 431 aa9.28□□□□□ -0.92
ERCC8-202ENST00000381118 FAM83AQ86UY5 434 aa9.28□□□□□ -0.92
ERCC8-202ENST00000381118 TRPM4Q8TD43 1214 aa9.28□□□□□ -0.92
ERCC8-202ENST00000381118 CCDC17Q96LX7 622 aa9.28□□□□□ -0.92
ERCC8-202ENST00000381118 RNF26Q9BY78 433 aaPredicted RBP9.28□□□□□ -0.92
ERCC8-202ENST00000381118 GPRC5DQ9NZD1 345 aa9.28□□□□□ -0.92
ERCC8-202ENST00000381118 FRMPD2Q68DX3 1309 aaPredicted RBP9.27□□□□□ -0.92
ERCC8-202ENST00000381118 IGKV6D-41A0A0C4DH26 115 aa9.27□□□□□ -0.93
ERCC8-202ENST00000381118 USP17L5A8MUK1 530 aa9.27□□□□□ -0.93
ERCC8-202ENST00000381118 TRAK2O60296 914 aa9.27□□□□□ -0.93
ERCC8-202ENST00000381118 GH2P01242 217 aa9.27□□□□□ -0.93
ERCC8-202ENST00000381118 JAG1P78504 1218 aa9.27□□□□□ -0.93
ERCC8-202ENST00000381118 CEBPZQ03701 1054 aaKnown RBP9.27□□□□□ -0.93
ERCC8-202ENST00000381118 FUT2Q10981 343 aa9.27□□□□□ -0.93
ERCC8-202ENST00000381118 GRM4Q14833 912 aa9.27□□□□□ -0.93
ERCC8-202ENST00000381118 ANGEL2Q5VTE6 544 aaKnown RBP9.27□□□□□ -0.93
ERCC8-202ENST00000381118 WASF1Q92558 559 aa9.27□□□□□ -0.93
ERCC8-202ENST00000381118 LMBRD1Q9NUN5 540 aa9.27□□□□□ -0.93
ERCC8-202ENST00000381118 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.27□□□□□ -0.93
ERCC8-202ENST00000381118 TFIP11Q9UBB9 837 aaKnown RBP9.27□□□□□ -0.93
ERCC8-202ENST00000381118 HERC5Q9UII4 1024 aaKnown RBP9.27□□□□□ -0.93
ERCC8-202ENST00000381118 ISY1Q9ULR0 285 aaKnown RBP9.27□□□□□ -0.93
ERCC8-202ENST00000381118 KCNJ14Q9UNX9 436 aa9.27□□□□□ -0.93
ERCC8-202ENST00000381118 KIF28PB7ZC32 967 aa9.27□□□□□ -0.93
ERCC8-202ENST00000381118 PARP1P09874 1014 aaKnown RBP9.27□□□□□ -0.93
ERCC8-202ENST00000381118 EEF2P13639 858 aaKnown RBP9.27□□□□□ -0.93
ERCC8-202ENST00000381118 KRT85P78386 507 aa9.27□□□□□ -0.93
ERCC8-202ENST00000381118 ICA1Q05084 483 aa9.27□□□□□ -0.93
ERCC8-202ENST00000381118 GNL2Q13823 731 aaKnown RBP9.27□□□□□ -0.93
ERCC8-202ENST00000381118 TNFAIP1Q13829 316 aa9.27□□□□□ -0.93
ERCC8-202ENST00000381118 FKBP1CQ5VVH2 108 aa9.27□□□□□ -0.93
ERCC8-202ENST00000381118 USP48Q86UV5 1035 aa9.27□□□□□ -0.93
ERCC8-202ENST00000381118 METTL16Q86W50 562 aaKnown RBP9.27□□□□□ -0.93
ERCC8-202ENST00000381118 GZF1Q9H116 711 aaPredicted RBP9.27□□□□□ -0.93
ERCC8-202ENST00000381118 ZSCAN16Q9H4T2 348 aaPredicted RBP9.27□□□□□ -0.93
ERCC8-202ENST00000381118 VPS54Q9P1Q0 977 aa9.27□□□□□ -0.93
ERCC8-202ENST00000381118 KLRF2D3W0D1 207 aa9.26□□□□□ -0.93
ERCC8-202ENST00000381118 PRPF3O43395 683 aaKnown RBP9.26□□□□□ -0.93
ERCC8-202ENST00000381118 PDHBP11177 359 aa9.26□□□□□ -0.93
ERCC8-202ENST00000381118 NOVP48745 357 aa9.26□□□□□ -0.93
ERCC8-202ENST00000381118 PKN1Q16512 942 aa9.26□□□□□ -0.93
ERCC8-202ENST00000381118 PRAMEF18Q5VWM3 479 aa9.26□□□□□ -0.93
ERCC8-202ENST00000381118 TMEM179Q6ZVK1 233 aa9.26□□□□□ -0.93
ERCC8-202ENST00000381118 FTOQ9C0B1 505 aaKnown RBP eCLIP9.26□□□□□ -0.93
ERCC8-202ENST00000381118 CABP5Q9NP86 173 aa9.26□□□□□ -0.93
ERCC8-202ENST00000381118 DDX49Q9Y6V7 483 aaKnown RBP9.26□□□□□ -0.93
ERCC8-202ENST00000381118 PALM3A6NDB9 673 aaPredicted RBP9.25□□□□□ -0.93
ERCC8-202ENST00000381118 CYTH3O43739 400 aa9.25□□□□□ -0.93
ERCC8-202ENST00000381118 GADD45BO75293 160 aaPredicted RBP9.25□□□□□ -0.93
ERCC8-202ENST00000381118 VEGFAP15692 232 aaPredicted RBP9.25□□□□□ -0.93
ERCC8-202ENST00000381118 MMP14P50281 582 aa9.25□□□□□ -0.93
ERCC8-202ENST00000381118 KIF23Q02241 960 aaPredicted RBP9.25□□□□□ -0.93
ERCC8-202ENST00000381118 HOMER1Q86YM7 354 aa9.25□□□□□ -0.93
ERCC8-202ENST00000381118 MAP3K14Q99558 947 aa9.25□□□□□ -0.93
ERCC8-202ENST00000381118 UBA5Q9GZZ9 404 aa9.25□□□□□ -0.93
ERCC8-202ENST00000381118 DEFB129Q9H1M3 183 aa9.25□□□□□ -0.93
ERCC8-202ENST00000381118 KANSL2Q9H9L4 492 aa9.25□□□□□ -0.93
ERCC8-202ENST00000381118 VAT1LQ9HCJ6 419 aa9.25□□□□□ -0.93
ERCC8-202ENST00000381118 GGA3Q9NZ52 723 aa9.25□□□□□ -0.93
ERCC8-202ENST00000381118 LMOD1P29536 600 aaPredicted RBP9.25□□□□□ -0.93
ERCC8-202ENST00000381118 HIRAP54198 1017 aaPredicted RBP9.25□□□□□ -0.93
ERCC8-202ENST00000381118 KCTD1Q719H9 257 aa9.25□□□□□ -0.93
ERCC8-202ENST00000381118 GPKOWQ92917 476 aaPredicted RBP eCLIP9.25□□□□□ -0.93
ERCC8-202ENST00000381118 SHISA4Q96DD7 197 aa9.25□□□□□ -0.93
ERCC8-202ENST00000381118 TEPSINQ96N21 525 aa9.25□□□□□ -0.93
ERCC8-202ENST00000381118 GPCPD1Q9NPB8 672 aa9.25□□□□□ -0.93
ERCC8-202ENST00000381118 PGAP2Q9UHJ9 254 aa9.25□□□□□ -0.93
ERCC8-202ENST00000381118 FZD1Q9UP38 647 aa9.25□□□□□ -0.93
ERCC8-202ENST00000381118 BTBD18B2RXH4 712 aa9.24□□□□□ -0.93
ERCC8-202ENST00000381118 MMP1P03956 469 aa9.24□□□□□ -0.93
ERCC8-202ENST00000381118 XBP1P17861 261 aa9.24□□□□□ -0.93
ERCC8-202ENST00000381118 PTMSP20962 102 aa9.24□□□□□ -0.93
ERCC8-202ENST00000381118 GNAQP50148 359 aa9.24□□□□□ -0.93
ERCC8-202ENST00000381118 CCDC96Q2M329 555 aa9.24□□□□□ -0.93
ERCC8-202ENST00000381118 SLC35G1Q2M3R5 365 aa9.24□□□□□ -0.93
ERCC8-202ENST00000381118 NBPF12Q5TAG4 269 aaPredicted RBP9.24□□□□□ -0.93
ERCC8-202ENST00000381118 CCDC84Q86UT8 332 aaPredicted RBP9.24□□□□□ -0.93
ERCC8-202ENST00000381118 SCG2P13521 617 aa9.24□□□□□ -0.93
ERCC8-202ENST00000381118 ECE1P42892 770 aa9.24□□□□□ -0.93
ERCC8-202ENST00000381118 NR5A1Q13285 461 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms