RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 VGLL2Q8N8G2 317 aa14.15□□□□□ -0.14
CDX2-201ENST00000381020 RRP9O43818 475 aaKnown RBP14.14□□□□□ -0.15
CDX2-201ENST00000381020 RBM6P78332 1123 aaKnown RBP14.14□□□□□ -0.15
CDX2-201ENST00000381020 REXO1Q8N1G1 1221 aaKnown RBP14.14□□□□□ -0.15
CDX2-201ENST00000381020 LZTFL1Q9NQ48 299 aa14.14□□□□□ -0.15
CDX2-201ENST00000381020 RIOK3O14730 519 aaKnown RBP14.14□□□□□ -0.15
CDX2-201ENST00000381020 CBX1P83916 185 aa14.14□□□□□ -0.15
CDX2-201ENST00000381020 RAD51AP2Q09MP3 1159 aa14.14□□□□□ -0.15
CDX2-201ENST00000381020 USH1GQ495M9 461 aa14.14□□□□□ -0.15
CDX2-201ENST00000381020 FOXN1O15353 648 aa14.14□□□□□ -0.15
CDX2-201ENST00000381020 PPIP5K2O43314 1243 aa14.14□□□□□ -0.15
CDX2-201ENST00000381020 PCP11498 1178 aaKnown RBP14.14□□□□□ -0.15
CDX2-201ENST00000381020 PDE6BP35913 854 aa14.14□□□□□ -0.15
CDX2-201ENST00000381020 DNA2P51530 1060 aa14.14□□□□□ -0.15
CDX2-201ENST00000381020 ADKP55263 362 aaKnown RBP14.14□□□□□ -0.15
CDX2-201ENST00000381020 TXNRD1Q16881 649 aa14.14□□□□□ -0.15
CDX2-201ENST00000381020 DYMQ7RTS9 669 aa14.14□□□□□ -0.15
CDX2-201ENST00000381020 CACNA2D4Q7Z3S7 1137 aa14.14□□□□□ -0.15
CDX2-201ENST00000381020 SPDYE4A6NLX3 237 aa14.13□□□□□ -0.15
CDX2-201ENST00000381020 FAM196BA6NMK8 535 aa14.13□□□□□ -0.15
CDX2-201ENST00000381020 KIF5CO60282 957 aa14.13□□□□□ -0.15
CDX2-201ENST00000381020 CASQ1P31415 396 aa14.13□□□□□ -0.15
CDX2-201ENST00000381020 SLC16A2P36021 539 aa14.13□□□□□ -0.15
CDX2-201ENST00000381020 UBXN1Q04323 297 aa14.13□□□□□ -0.15
CDX2-201ENST00000381020 ZNF771Q7L3S4 317 aaPredicted RBP14.13□□□□□ -0.15
CDX2-201ENST00000381020 CACNA1FO60840 1977 aa14.13□□□□□ -0.15
CDX2-201ENST00000381020 PRPF3O43395 683 aaKnown RBP14.13□□□□□ -0.15
CDX2-201ENST00000381020 TECP42680 631 aa14.13□□□□□ -0.15
CDX2-201ENST00000381020 CDK8P49336 464 aa14.13□□□□□ -0.15
CDX2-201ENST00000381020 WWC2Q6AWC2 1192 aa14.13□□□□□ -0.15
CDX2-201ENST00000381020 LARGE2Q8N3Y3 721 aa14.13□□□□□ -0.15
CDX2-201ENST00000381020 MRPL12P52815 198 aaKnown RBP14.13□□□□□ -0.15
CDX2-201ENST00000381020 PDE4DQ08499 809 aa14.13□□□□□ -0.15
CDX2-201ENST00000381020 CCDC40Q4G0X9 1142 aa14.13□□□□□ -0.15
CDX2-201ENST00000381020 TCERG1LQ5VWI1 586 aa14.13□□□□□ -0.15
CDX2-201ENST00000381020 TMTC3Q6ZXV5 915 aa14.13□□□□□ -0.15
CDX2-201ENST00000381020 STK32BQ9NY57 414 aa14.13□□□□□ -0.15
CDX2-201ENST00000381020 WDR19Q8NEZ3 1342 aa14.13□□□□□ -0.15
CDX2-201ENST00000381020 SYNRGQ9UMZ2 1314 aa14.13□□□□□ -0.15
CDX2-201ENST00000381020 TNS2Q63HR2 1409 aa14.13□□□□□ -0.15
CDX2-201ENST00000381020 SHC4Q6S5L8 630 aa14.12□□□□□ -0.15
CDX2-201ENST00000381020 LRRC8AQ8IWT6 810 aa14.12□□□□□ -0.15
CDX2-201ENST00000381020 IGSF22Q8N9C0 903 aa14.12□□□□□ -0.15
CDX2-201ENST00000381020 TAB2Q9NYJ8 693 aa14.12□□□□□ -0.15
CDX2-201ENST00000381020 SPDYE3A6NKU9 549 aa14.12□□□□□ -0.15
CDX2-201ENST00000381020 RC3H1Q5TC82 1133 aaKnown RBP14.12□□□□□ -0.15
CDX2-201ENST00000381020 FBXO33Q7Z6M2 555 aa14.12□□□□□ -0.15
CDX2-201ENST00000381020 BAG1Q99933 345 aaPredicted RBP14.12□□□□□ -0.15
CDX2-201ENST00000381020 PAXBP1Q9Y5B6 917 aa14.12□□□□□ -0.15
CDX2-201ENST00000381020 TDRD12Q587J7 1177 aaKnown RBP14.12□□□□□ -0.15
CDX2-201ENST00000381020 STAG2Q8N3U4 1231 aa14.12□□□□□ -0.15
CDX2-201ENST00000381020 COA7Q96BR5 231 aa14.12□□□□□ -0.15
CDX2-201ENST00000381020 MRFAP1L1Q96HT8 127 aa14.12□□□□□ -0.15
CDX2-201ENST00000381020 CTAGE1Q96RT6 745 aa14.12□□□□□ -0.15
CDX2-201ENST00000381020 PIGSQ96S52 555 aa14.12□□□□□ -0.15
CDX2-201ENST00000381020 TSG101Q99816 390 aa14.12□□□□□ -0.15
CDX2-201ENST00000381020 RGPD1P0DJD0 1748 aa14.12□□□□□ -0.15
CDX2-201ENST00000381020 LRWD1Q9UFC0 647 aa14.11□□□□□ -0.15
CDX2-201ENST00000381020 HDAC9Q9UKV0 1011 aa14.11□□□□□ -0.15
CDX2-201ENST00000381020 USP49Q70CQ1 688 aa14.11□□□□□ -0.15
CDX2-201ENST00000381020 KCTD1Q719H9 257 aa14.11□□□□□ -0.15
CDX2-201ENST00000381020 ZNF397Q8NF99 534 aaPredicted RBP14.11□□□□□ -0.15
CDX2-201ENST00000381020 SERPINB13Q9UIV8 391 aa14.11□□□□□ -0.15
CDX2-201ENST00000381020 TCRBV5S4A2TA0A5A2 114 aa14.11□□□□□ -0.15
CDX2-201ENST00000381020 MYO1BO43795 1136 aa14.11□□□□□ -0.15
CDX2-201ENST00000381020 ADCY7P51828 1080 aa14.11□□□□□ -0.15
CDX2-201ENST00000381020 SPAG1Q07617 926 aa14.11□□□□□ -0.15
CDX2-201ENST00000381020 CCDC70Q6NSX1 233 aa14.11□□□□□ -0.15
CDX2-201ENST00000381020 KRT25Q7Z3Z0 450 aa14.11□□□□□ -0.15
CDX2-201ENST00000381020 TMEM47Q9BQJ4 181 aa14.11□□□□□ -0.15
CDX2-201ENST00000381020 SAMM50Q9Y512 469 aa14.11□□□□□ -0.15
CDX2-201ENST00000381020 PLCD1P51178 756 aa14.1□□□□□ -0.15
CDX2-201ENST00000381020 CERS3Q8IU89 383 aa14.1□□□□□ -0.15
CDX2-201ENST00000381020 SRBD1Q8N5C6 995 aaKnown RBP14.1□□□□□ -0.15
CDX2-201ENST00000381020 MMRN2Q9H8L6 949 aa14.1□□□□□ -0.15
CDX2-201ENST00000381020 PPP4R3BQ5MIZ7 849 aa14.1□□□□□ -0.15
CDX2-201ENST00000381020 CABP7Q86V35 215 aa14.1□□□□□ -0.15
CDX2-201ENST00000381020 SPICE1Q8N0Z3 855 aa14.1□□□□□ -0.15
CDX2-201ENST00000381020 KIAA1524Q8TCG1 905 aa14.1□□□□□ -0.15
CDX2-201ENST00000381020 MXD3Q9BW11 206 aa14.1□□□□□ -0.15
CDX2-201ENST00000381020 RNF216Q9NWF9 866 aaPredicted RBP14.1□□□□□ -0.15
CDX2-201ENST00000381020 PKD2L1Q9P0L9 805 aa14.1□□□□□ -0.15
CDX2-201ENST00000381020 TCP10L2B9ZVM9 353 aa14.1□□□□□ -0.15
CDX2-201ENST00000381020 PTPREP23469 700 aa14.1□□□□□ -0.15
CDX2-201ENST00000381020 CLEC10AQ8IUN9 316 aa14.1□□□□□ -0.15
CDX2-201ENST00000381020 AGXT2Q9BYV1 514 aa14.1□□□□□ -0.15
CDX2-201ENST00000381020 SRPRBQ9Y5M8 271 aaKnown RBP14.1□□□□□ -0.15
CDX2-201ENST00000381020 CNTNAP4Q9C0A0 1308 aa14.1□□□□□ -0.15
CDX2-201ENST00000381020 CLRN2A0PK11 232 aa14.1□□□□□ -0.15
CDX2-201ENST00000381020 PAK1Q13153 545 aa14.1□□□□□ -0.15
CDX2-201ENST00000381020 SNX29Q8TEQ0 813 aa14.1□□□□□ -0.15
CDX2-201ENST00000381020 TBC1D7Q9P0N9 293 aa14.1□□□□□ -0.15
CDX2-201ENST00000381020 CALCRLQ16602 461 aa14.09□□□□□ -0.15
CDX2-201ENST00000381020 SAMSN1Q9NSI8 373 aaKnown RBP14.09□□□□□ -0.15
CDX2-201ENST00000381020 MAN1B1Q9UKM7 699 aa14.09□□□□□ -0.15
CDX2-201ENST00000381020 GRIN1Q05586 938 aa14.09□□□□□ -0.15
CDX2-201ENST00000381020 SPA17Q15506 151 aa14.09□□□□□ -0.15
CDX2-201ENST00000381020 CCDC144BQ3MJ40 725 aa14.09□□□□□ -0.15
CDX2-201ENST00000381020 SV2BQ7L1I2 683 aa14.09□□□□□ -0.15
CDX2-201ENST00000381020 DGKHQ86XP1 1220 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms