RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 COG1Q8WTW3 980 aa8.41□□□□□ -1.06
CDKL5-201ENST00000379989 STAMBPL1Q96FJ0 436 aa8.41□□□□□ -1.06
CDKL5-201ENST00000379989 CCDC114Q96M63 670 aa8.41□□□□□ -1.06
CDKL5-201ENST00000379989 TUBBP07437 444 aa8.4□□□□□ -1.06
CDKL5-201ENST00000379989 GNAT1P11488 350 aa8.4□□□□□ -1.06
CDKL5-201ENST00000379989 FERP16591 822 aa8.4□□□□□ -1.06
CDKL5-201ENST00000379989 TUBB4BP68371 445 aa8.4□□□□□ -1.06
CDKL5-201ENST00000379989 MYO1EQ12965 1108 aa8.4□□□□□ -1.06
CDKL5-201ENST00000379989 RBM33Q96EV2 1170 aaKnown RBP8.4□□□□□ -1.06
CDKL5-201ENST00000379989 ZNF496Q96IT1 587 aaPredicted RBP8.4□□□□□ -1.06
CDKL5-201ENST00000379989 HAUS2Q9NVX0 235 aa8.4□□□□□ -1.06
CDKL5-201ENST00000379989 ITGB4P16144 1822 aa8.4□□□□□ -1.06
CDKL5-201ENST00000379989 TOGARAM1Q9Y4F4 1720 aa8.4□□□□□ -1.06
CDKL5-201ENST00000379989 STARD3NLO95772 234 aa8.4□□□□□ -1.06
CDKL5-201ENST00000379989 SMARCC2Q8TAQ2 1214 aa8.4□□□□□ -1.06
CDKL5-201ENST00000379989 CCDC47Q96A33 483 aaKnown RBP8.4□□□□□ -1.06
CDKL5-201ENST00000379989 ALDH8A1Q9H2A2 487 aaPredicted RBP8.4□□□□□ -1.06
CDKL5-201ENST00000379989 GOLPH3LQ9H4A5 285 aa8.4□□□□□ -1.06
CDKL5-201ENST00000379989 OPA1O60313 960 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 ATP6V1G1O75348 118 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 KIF4AO95239 1232 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 TMEM62Q0P6H9 643 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 PDCLQ13371 301 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 NAA35Q5VZE5 725 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 RILPL2Q969X0 211 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 GORASP1Q9BQQ3 440 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 MRPL44Q9H9J2 332 aaKnown RBP8.39□□□□□ -1.07
CDKL5-201ENST00000379989 RIPOR2Q9Y4F9 1068 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 MYO1BO43795 1136 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 PFKFB2O60825 505 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 FANCCQ00597 558 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 DRP2Q13474 957 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 SPRED3Q2MJR0 410 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 GNPTABQ3T906 1256 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 AKNAD1Q5T1N1 836 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 NECAB1Q8N987 351 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 PI4K2BQ8TCG2 481 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 TBC1D31Q96DN5 1066 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 GDAP1L1Q96MZ0 367 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 ZNF570Q96NI8 536 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 C15orf41Q9Y2V0 281 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 TJP1Q07157 1748 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 A6NHS1 94 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 ERVV-1B6SEH8 477 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 MGRN1O60291 552 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 IFT88Q13099 833 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 NCAPHQ15003 741 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 DBN1Q16643 649 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 PTPN21Q16825 1174 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 DPCR1Q3MIW9 517 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 BARGINQ6ZT62 677 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 UNC5CLQ8IV45 518 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 DPF2Q92785 391 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 DESI2Q9BSY9 194 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 DNAAF2Q9NVR5 837 aaKnown RBP8.39□□□□□ -1.07
CDKL5-201ENST00000379989 TMOD3Q9NYL9 352 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 MYO1AQ9UBC5 1043 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 SUN2Q9UH99 717 aa8.39□□□□□ -1.07
CDKL5-201ENST00000379989 GOLGA6BA6NDN3 693 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 B4DLN1 442 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 KCNQ3O43525 872 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 PPFIA3O75145 1194 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 NBPF7P0C2Y1 421 aaPredicted RBP8.38□□□□□ -1.07
CDKL5-201ENST00000379989 SKOR1P84550 965 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 LRRC23Q53EV4 343 aaPredicted RBP8.38□□□□□ -1.07
CDKL5-201ENST00000379989 GALNT15Q8N3T1 639 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 XAGE3Q8WTP9 111 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 TSC22D3Q99576 134 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 TRIM4Q9C037 500 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 PHACTR1Q9C0D0 580 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 CWC25Q9NXE8 425 aaPredicted RBP8.38□□□□□ -1.07
CDKL5-201ENST00000379989 HMG20BQ9P0W2 317 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 BCL9O00512 1426 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 GOLGA6L7A0A1B0GV03 622 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 A0A1B0GVL5 298 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 CTAGE15A4D2H0 777 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 LRRC10BA6NIK2 292 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 BUB1BO60566 1050 aaPredicted RBP8.38□□□□□ -1.07
CDKL5-201ENST00000379989 CTAGE8P0CG41 777 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 ATP1A3P13637 1013 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 ACBD5Q5T8D3 534 aaPredicted RBP8.38□□□□□ -1.07
CDKL5-201ENST00000379989 C6orf89Q6UWU4 347 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 Q6ZUG5 572 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 CTAGE6Q86UF2 777 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 CTAGE4Q8IX94 777 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 ZFAND2BQ8WV99 257 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 BPIFA3Q9BQP9 254 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 ACTR5Q9H9F9 607 aaPredicted RBP8.38□□□□□ -1.07
CDKL5-201ENST00000379989 SH2B1Q9NRF2 756 aaPredicted RBP8.38□□□□□ -1.07
CDKL5-201ENST00000379989 HOOK1Q9UJC3 728 aaKnown RBP8.38□□□□□ -1.07
CDKL5-201ENST00000379989 DNM1LO00429 736 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 LIN7AO14910 233 aaPredicted RBP8.38□□□□□ -1.07
CDKL5-201ENST00000379989 MAP4K4O95819 1239 aaPredicted RBP8.38□□□□□ -1.07
CDKL5-201ENST00000379989 MYBL1P10243 752 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 IFFO1Q0D2I5 559 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 BLMHQ13867 455 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 COPS6Q7L5N1 327 aa8.38□□□□□ -1.07
CDKL5-201ENST00000379989 DZIP3Q86Y13 1208 aaKnown RBP8.38□□□□□ -1.07
CDKL5-201ENST00000379989 CCAR1Q8IX12 1150 aaKnown RBP8.38□□□□□ -1.07
CDKL5-201ENST00000379989 ZNF473Q8WTR7 871 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms