RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 CD109Q6YHK3 1445 aa12.34□□□□□ -0.43
PTCHD1-201ENST00000379361 AS3MTQ9HBK9 375 aa12.34□□□□□ -0.43
PTCHD1-201ENST00000379361 KPNA2P52292 529 aaKnown RBP12.34□□□□□ -0.43
PTCHD1-201ENST00000379361 GRK7Q8WTQ7 553 aa12.34□□□□□ -0.43
PTCHD1-201ENST00000379361 EFHD1Q9BUP0 239 aa12.34□□□□□ -0.43
PTCHD1-201ENST00000379361 NEUROG2Q9H2A3 272 aa12.34□□□□□ -0.43
PTCHD1-201ENST00000379361 CDV3Q9UKY7 258 aaKnown RBP12.34□□□□□ -0.43
PTCHD1-201ENST00000379361 CASP2P42575 452 aa12.34□□□□□ -0.43
PTCHD1-201ENST00000379361 TEX11Q8IYF3 940 aa12.34□□□□□ -0.43
PTCHD1-201ENST00000379361 THEGQ9P2T0 379 aa12.34□□□□□ -0.43
PTCHD1-201ENST00000379361 RNF169Q8NCN4 708 aa12.34□□□□□ -0.43
PTCHD1-201ENST00000379361 HELBQ8NG08 1087 aaPredicted RBP12.34□□□□□ -0.43
PTCHD1-201ENST00000379361 C1orf112Q9NSG2 853 aa12.34□□□□□ -0.43
PTCHD1-201ENST00000379361 IQGAP2Q13576 1575 aa12.34□□□□□ -0.43
PTCHD1-201ENST00000379361 CCDC87Q9NVE4 849 aa12.33□□□□□ -0.43
PTCHD1-201ENST00000379361 SUCLA2Q9P2R7 463 aaPredicted RBP12.33□□□□□ -0.43
PTCHD1-201ENST00000379361 SAP30BPQ9UHR5 308 aaKnown RBP12.33□□□□□ -0.43
PTCHD1-201ENST00000379361 ZNF233A6NK53 670 aa12.33□□□□□ -0.44
PTCHD1-201ENST00000379361 EFCAB14O75071 495 aa12.33□□□□□ -0.44
PTCHD1-201ENST00000379361 SLFN5Q08AF3 891 aa12.33□□□□□ -0.44
PTCHD1-201ENST00000379361 WAPLQ7Z5K2 1190 aa12.33□□□□□ -0.44
PTCHD1-201ENST00000379361 RNASELQ05823 741 aaKnown RBP12.33□□□□□ -0.44
PTCHD1-201ENST00000379361 LRRC43Q8N309 656 aa12.33□□□□□ -0.44
PTCHD1-201ENST00000379361 TBC1D22AQ8WUA7 517 aa12.33□□□□□ -0.44
PTCHD1-201ENST00000379361 RBM8AQ9Y5S9 174 aaKnown RBP12.33□□□□□ -0.44
PTCHD1-201ENST00000379361 CHD4Q14839 1912 aa12.33□□□□□ -0.44
PTCHD1-201ENST00000379361 TROQ12816 1431 aaPredicted RBP12.33□□□□□ -0.44
PTCHD1-201ENST00000379361 PPP4R4Q6NUP7 873 aa12.33□□□□□ -0.44
PTCHD1-201ENST00000379361 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.33□□□□□ -0.44
PTCHD1-201ENST00000379361 ADGRL1O94910 1474 aa12.33□□□□□ -0.44
PTCHD1-201ENST00000379361 RUSC2Q8N2Y8 1516 aa12.33□□□□□ -0.44
PTCHD1-201ENST00000379361 RGS16O15492 202 aaPredicted RBP12.33□□□□□ -0.44
PTCHD1-201ENST00000379361 TYRO3Q06418 890 aa12.33□□□□□ -0.44
PTCHD1-201ENST00000379361 PPP2R5AQ15172 486 aa12.33□□□□□ -0.44
PTCHD1-201ENST00000379361 VPS37BQ9H9H4 285 aa12.33□□□□□ -0.44
PTCHD1-201ENST00000379361 MYH14Q7Z406 1995 aaKnown RBP12.33□□□□□ -0.44
PTCHD1-201ENST00000379361 TBC1D8BQ0IIM8 1120 aa12.33□□□□□ -0.44
PTCHD1-201ENST00000379361 DPP8Q6V1X1 898 aaPredicted RBP12.33□□□□□ -0.44
PTCHD1-201ENST00000379361 NAPGQ99747 312 aaPredicted RBP12.33□□□□□ -0.44
PTCHD1-201ENST00000379361 FGD4Q96M96 766 aa12.33□□□□□ -0.44
PTCHD1-201ENST00000379361 PLIN2Q99541 437 aa12.33□□□□□ -0.44
PTCHD1-201ENST00000379361 CHPF2Q9P2E5 772 aa12.33□□□□□ -0.44
PTCHD1-201ENST00000379361 ZNF212Q9UDV6 495 aa12.33□□□□□ -0.44
PTCHD1-201ENST00000379361 SUFUQ9UMX1 484 aa12.33□□□□□ -0.44
PTCHD1-201ENST00000379361 A0A1B0GUL7 405 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 PMLP29590 882 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 NT5C3AQ9H0P0 336 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 CACNA1CQ13936 2221 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 PEX26Q7Z412 305 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 METTL23Q86XA0 190 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 GAS7O60861 476 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 ATP6V1E2Q96A05 226 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 ADCY7P51828 1080 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 DEXIO95424 95 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 ASPHQ12797 758 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 IBTKQ9P2D0 1353 aaPredicted RBP12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 NDUFAB1O14561 156 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 KIAA1841Q6NSI8 718 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 NDUFAF2Q8N183 169 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 CHURC1Q8WUH1 139 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 KHDRBS2Q5VWX1 349 aaKnown RBP12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 SLFN12Q8IYM2 578 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 DCAF15Q66K64 600 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 TTC41PQ6P2S7 1318 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 EXOC3O60645 756 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 RAD51AP2Q09MP3 1159 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 KLC3Q6P597 504 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 TRIM42Q8IWZ5 723 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 CNPY2Q9Y2B0 182 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 DOPEY2Q9Y3R5 2298 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 ANKRD35Q8N283 1001 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 CCDC138Q96M89 665 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 ST7Q9NRC1 585 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 SFMBT2Q5VUG0 894 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 USP48Q86UV5 1035 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 MIGA1Q8NAN2 632 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 EFCC1Q9HA90 598 aa12.32□□□□□ -0.44
PTCHD1-201ENST00000379361 EIF3DO15371 548 aaKnown RBP eCLIP12.31□□□□□ -0.44
PTCHD1-201ENST00000379361 GNL1P36915 607 aaPredicted RBP12.31□□□□□ -0.44
PTCHD1-201ENST00000379361 CLNS1AP54105 237 aaKnown RBP12.31□□□□□ -0.44
PTCHD1-201ENST00000379361 RUNDC3BQ96NL0 473 aa12.31□□□□□ -0.44
PTCHD1-201ENST00000379361 HADHQ16836 314 aaKnown RBP12.31□□□□□ -0.44
PTCHD1-201ENST00000379361 OPHN1O60890 802 aa12.31□□□□□ -0.44
PTCHD1-201ENST00000379361 TNNC2P02585 160 aa12.31□□□□□ -0.44
PTCHD1-201ENST00000379361 REXO1Q8N1G1 1221 aaKnown RBP12.31□□□□□ -0.44
PTCHD1-201ENST00000379361 CDKL2Q92772 493 aa12.31□□□□□ -0.44
PTCHD1-201ENST00000379361 A6NJR5 290 aa12.31□□□□□ -0.44
PTCHD1-201ENST00000379361 CFAP221Q4G0U5 840 aa12.31□□□□□ -0.44
PTCHD1-201ENST00000379361 MICAL1Q8TDZ2 1067 aa12.31□□□□□ -0.44
PTCHD1-201ENST00000379361 RIC8AQ9NPQ8 531 aa12.31□□□□□ -0.44
PTCHD1-201ENST00000379361 COPS6Q7L5N1 327 aa12.31□□□□□ -0.44
PTCHD1-201ENST00000379361 LARSQ9P2J5 1176 aaKnown RBP12.31□□□□□ -0.44
PTCHD1-201ENST00000379361 CCDC13Q8IYE1 715 aa12.31□□□□□ -0.44
PTCHD1-201ENST00000379361 HYOU1Q9Y4L1 999 aa12.31□□□□□ -0.44
PTCHD1-201ENST00000379361 RARSP54136 660 aaKnown RBP12.31□□□□□ -0.44
PTCHD1-201ENST00000379361 IFRD2Q12894 506 aaPredicted RBP12.31□□□□□ -0.44
PTCHD1-201ENST00000379361 RALGAPBQ86X10 1494 aa12.31□□□□□ -0.44
PTCHD1-201ENST00000379361 NSMFQ6X4W1 530 aa12.31□□□□□ -0.44
PTCHD1-201ENST00000379361 NMIQ13287 307 aaPredicted RBP12.31□□□□□ -0.44
PTCHD1-201ENST00000379361 KARSQ15046 597 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms