RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 FLOT1O75955 427 aa12.56□□□□□ -0.4
RPGR-203ENST00000378505 LARGE1O95461 756 aa12.56□□□□□ -0.4
RPGR-203ENST00000378505 PTGDRQ13258 359 aa12.56□□□□□ -0.4
RPGR-203ENST00000378505 MORC3Q14149 939 aa12.56□□□□□ -0.4
RPGR-203ENST00000378505 TUBB8Q3ZCM7 444 aa12.56□□□□□ -0.4
RPGR-203ENST00000378505 LINC00301Q8NCQ3 95 aa12.56□□□□□ -0.4
RPGR-203ENST00000378505 MSANTD4Q8NCY6 345 aa12.56□□□□□ -0.4
RPGR-203ENST00000378505 KIFAP3Q92845 792 aa12.56□□□□□ -0.4
RPGR-203ENST00000378505 FAM207AQ9NSI2 230 aaPredicted RBP12.56□□□□□ -0.4
RPGR-203ENST00000378505 PKD2L1Q9P0L9 805 aa12.56□□□□□ -0.4
RPGR-203ENST00000378505 PPP2R2CQ9Y2T4 447 aa12.56□□□□□ -0.4
RPGR-203ENST00000378505 ADD2P35612 726 aa12.56□□□□□ -0.4
RPGR-203ENST00000378505 CCDC25Q86WR0 208 aa12.56□□□□□ -0.4
RPGR-203ENST00000378505 OSBP2Q969R2 916 aa12.56□□□□□ -0.4
RPGR-203ENST00000378505 IFIH1Q9BYX4 1025 aaKnown RBP12.56□□□□□ -0.4
RPGR-203ENST00000378505 PYCARDQ9ULZ3 195 aa12.56□□□□□ -0.4
RPGR-203ENST00000378505 ANKARQ7Z5J8 1434 aa12.56□□□□□ -0.4
RPGR-203ENST00000378505 WDR17Q8IZU2 1322 aa12.56□□□□□ -0.4
RPGR-203ENST00000378505 ACTN4O43707 911 aaKnown RBP12.56□□□□□ -0.4
RPGR-203ENST00000378505 STAMBPO95630 424 aa12.56□□□□□ -0.4
RPGR-203ENST00000378505 NF2P35240 595 aa12.56□□□□□ -0.4
RPGR-203ENST00000378505 INF2Q27J81 1249 aa12.56□□□□□ -0.4
RPGR-203ENST00000378505 C6orf163Q5TEZ5 329 aa12.56□□□□□ -0.4
RPGR-203ENST00000378505 NELFCDQ8IXH7 590 aa12.56□□□□□ -0.4
RPGR-203ENST00000378505 FNBP1Q96RU3 617 aa12.56□□□□□ -0.4
RPGR-203ENST00000378505 ARAP3Q8WWN8 1544 aa12.55□□□□□ -0.4
RPGR-203ENST00000378505 CDC25BP30305 580 aa12.55□□□□□ -0.4
RPGR-203ENST00000378505 ERCC6LQ2NKX8 1250 aa12.55□□□□□ -0.4
RPGR-203ENST00000378505 SFMBT2Q5VUG0 894 aa12.55□□□□□ -0.4
RPGR-203ENST00000378505 RRAGAQ7L523 313 aa12.55□□□□□ -0.4
RPGR-203ENST00000378505 MICALL1Q8N3F8 863 aa12.55□□□□□ -0.4
RPGR-203ENST00000378505 FBF1Q8TES7 1133 aa12.55□□□□□ -0.4
RPGR-203ENST00000378505 UBLCP1Q8WVY7 318 aaPredicted RBP12.55□□□□□ -0.4
RPGR-203ENST00000378505 LRRC45Q96CN5 670 aa12.55□□□□□ -0.4
RPGR-203ENST00000378505 GSDMAQ96QA5 445 aa12.55□□□□□ -0.4
RPGR-203ENST00000378505 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.55□□□□□ -0.4
RPGR-203ENST00000378505 SAR1BQ9Y6B6 198 aa12.55□□□□□ -0.4
RPGR-203ENST00000378505 STX10O60499 249 aa12.55□□□□□ -0.4
RPGR-203ENST00000378505 KIF23Q02241 960 aaPredicted RBP12.55□□□□□ -0.4
RPGR-203ENST00000378505 SP4Q02446 784 aa12.55□□□□□ -0.4
RPGR-203ENST00000378505 BIRC3Q13489 604 aa12.55□□□□□ -0.4
RPGR-203ENST00000378505 WDR44Q5JSH3 913 aa12.55□□□□□ -0.4
RPGR-203ENST00000378505 FAM212AQ96EL1 285 aa12.55□□□□□ -0.4
RPGR-203ENST00000378505 CLTCL1P53675 1640 aa12.55□□□□□ -0.4
RPGR-203ENST00000378505 SMIM23A6NLE4 172 aa12.55□□□□□ -0.4
RPGR-203ENST00000378505 IKBKBO14920 756 aa12.55□□□□□ -0.4
RPGR-203ENST00000378505 OR52Z1P0C646 297 aa12.55□□□□□ -0.4
RPGR-203ENST00000378505 ERCC5P28715 1186 aaPredicted RBP12.55□□□□□ -0.4
RPGR-203ENST00000378505 BRD3Q15059 726 aa12.55□□□□□ -0.4
RPGR-203ENST00000378505 CFAP221Q4G0U5 840 aa12.55□□□□□ -0.4
RPGR-203ENST00000378505 NEK8Q86SG6 692 aa12.55□□□□□ -0.4
RPGR-203ENST00000378505 DESI2Q9BSY9 194 aa12.55□□□□□ -0.4
RPGR-203ENST00000378505 TBC1D7Q9P0N9 293 aa12.55□□□□□ -0.4
RPGR-203ENST00000378505 BIN2Q9UBW5 565 aaPredicted RBP12.55□□□□□ -0.4
RPGR-203ENST00000378505 PNPLA6Q8IY17 1366 aa12.55□□□□□ -0.4
RPGR-203ENST00000378505 HEG1Q9ULI3 1381 aa12.55□□□□□ -0.4
RPGR-203ENST00000378505 M0R2C6 588 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 SEMA3EO15041 775 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 DKC1O60832 514 aaKnown RBP eCLIP12.54□□□□□ -0.4
RPGR-203ENST00000378505 GNA14O95837 355 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 LONP1P36776 959 aaKnown RBP12.54□□□□□ -0.4
RPGR-203ENST00000378505 TRAPPC10P48553 1259 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 RNASE9P60153 205 aaKnown RBP12.54□□□□□ -0.4
RPGR-203ENST00000378505 GTF2IP78347 998 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 WHAMMP3Q1A5X7 153 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 C2CD5Q86YS7 1000 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 TMEM87AQ8NBN3 555 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 CCDC169A6NNP5 214 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 HAUS4Q9H6D7 363 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 NLRC4Q9NPP4 1024 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 EXOC7Q9UPT5 735 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 CEP104O60308 925 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 IFNAR1P17181 557 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 ERCC3P19447 782 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 RAD51AP2Q09MP3 1159 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 RESTQ13127 1097 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 DPCR1Q3MIW9 517 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 MYOCDQ8IZQ8 938 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 NRBP1Q9UHY1 535 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 KDM3AQ9Y4C1 1321 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 EXOC3O60645 756 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 FMNL1O95466 1100 aaPredicted RBP12.54□□□□□ -0.4
RPGR-203ENST00000378505 ATP2B4P23634 1241 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 RPS6KA1Q15418 735 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 MCTP2Q6DN12 878 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 TYW1BQ6NUM6 668 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 NLRP10Q86W26 655 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 MYCT1Q8N699 235 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 KIAA1524Q8TCG1 905 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 SYMPKQ92797 1274 aaKnown RBP12.54□□□□□ -0.4
RPGR-203ENST00000378505 TSNARE1Q96NA8 513 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 USP40Q9NVE5 1235 aa12.54□□□□□ -0.4
RPGR-203ENST00000378505 GOLGA6CA6NDK9 693 aa12.53□□□□□ -0.4
RPGR-203ENST00000378505 H7C1W4 665 aa12.53□□□□□ -0.4
RPGR-203ENST00000378505 GOLGA6DP0CG33 693 aa12.53□□□□□ -0.4
RPGR-203ENST00000378505 TCP10Q12799 353 aa12.53□□□□□ -0.4
RPGR-203ENST00000378505 PAK2Q13177 524 aa12.53□□□□□ -0.4
RPGR-203ENST00000378505 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.53□□□□□ -0.4
RPGR-203ENST00000378505 GOLGA6AQ9NYA3 693 aa12.53□□□□□ -0.4
RPGR-203ENST00000378505 GOLGA6BA6NDN3 693 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms