RNA–Protein interactions for RNA: ENST00000370902.7

EXOSC1-204, Transcript of exosome component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC1, Length 923 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-204ENST00000370902 AACSQ86V21 672 aa13.44□□□□□ -0.26
EXOSC1-204ENST00000370902 LCORLQ8N3X6 602 aa13.44□□□□□ -0.26
EXOSC1-204ENST00000370902 SDR42E1Q8WUS8 393 aa13.44□□□□□ -0.26
EXOSC1-204ENST00000370902 LPAR1Q92633 364 aa13.44□□□□□ -0.26
EXOSC1-204ENST00000370902 DCP1AQ9NPI6 582 aaPredicted RBP13.44□□□□□ -0.26
EXOSC1-204ENST00000370902 SMCHD1A6NHR9 2005 aa13.43□□□□□ -0.26
EXOSC1-204ENST00000370902 POTEB2H3BUK9 544 aa13.43□□□□□ -0.26
EXOSC1-204ENST00000370902 DNM1LO00429 736 aa13.43□□□□□ -0.26
EXOSC1-204ENST00000370902 COBLO75128 1261 aa13.43□□□□□ -0.26
EXOSC1-204ENST00000370902 CCNA1P78396 465 aa13.43□□□□□ -0.26
EXOSC1-204ENST00000370902 SNX17Q15036 470 aa13.43□□□□□ -0.26
EXOSC1-204ENST00000370902 SIRT2Q8IXJ6 389 aa13.43□□□□□ -0.26
EXOSC1-204ENST00000370902 SENP6Q9GZR1 1112 aaPredicted RBP13.43□□□□□ -0.26
EXOSC1-204ENST00000370902 IL1RAPL2Q9NP60 686 aa13.43□□□□□ -0.26
EXOSC1-204ENST00000370902 ZNF532Q9HCE3 1301 aa13.42□□□□□ -0.26
EXOSC1-204ENST00000370902 MAGEB6P1A0A0J9YX57 407 aa13.42□□□□□ -0.26
EXOSC1-204ENST00000370902 ADORA2AP29274 412 aa13.42□□□□□ -0.26
EXOSC1-204ENST00000370902 MFSD14CQ5VZR4 134 aa13.42□□□□□ -0.26
EXOSC1-204ENST00000370902 OLFML2BQ68BL8 750 aa13.42□□□□□ -0.26
EXOSC1-204ENST00000370902 FTSJ3Q8IY81 847 aaKnown RBP13.42□□□□□ -0.26
EXOSC1-204ENST00000370902 SHCBP1Q8NEM2 672 aa13.42□□□□□ -0.26
EXOSC1-204ENST00000370902 RHPN1Q8TCX5 695 aa13.42□□□□□ -0.26
EXOSC1-204ENST00000370902 PANK1Q8TE04 598 aa13.42□□□□□ -0.26
EXOSC1-204ENST00000370902 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.42□□□□□ -0.26
EXOSC1-204ENST00000370902 SPATC1LQ9H0A9 340 aa13.42□□□□□ -0.26
EXOSC1-204ENST00000370902 ZBED9Q6R2W3 1325 aa13.41□□□□□ -0.26
EXOSC1-204ENST00000370902 CHD9Q3L8U1 2897 aa13.41□□□□□ -0.26
EXOSC1-204ENST00000370902 MSCO60682 206 aa13.41□□□□□ -0.26
EXOSC1-204ENST00000370902 AKR1B1P15121 316 aa13.41□□□□□ -0.26
EXOSC1-204ENST00000370902 ERCC3P19447 782 aa13.41□□□□□ -0.26
EXOSC1-204ENST00000370902 ATN1P54259 1190 aaPredicted RBP13.41□□□□□ -0.26
EXOSC1-204ENST00000370902 RTP1P59025 263 aa13.41□□□□□ -0.26
EXOSC1-204ENST00000370902 GJC2Q5T442 439 aaPredicted RBP13.41□□□□□ -0.26
EXOSC1-204ENST00000370902 SLC9C2Q5TAH2 1124 aa13.41□□□□□ -0.26
EXOSC1-204ENST00000370902 WDR78Q5VTH9 848 aa13.41□□□□□ -0.26
EXOSC1-204ENST00000370902 CCAR1Q8IX12 1150 aaKnown RBP13.41□□□□□ -0.26
EXOSC1-204ENST00000370902 DYNLL2Q96FJ2 89 aa13.41□□□□□ -0.26
EXOSC1-204ENST00000370902 ROBO3Q96MS0 1386 aa13.41□□□□□ -0.26
EXOSC1-204ENST00000370902 LRRC37A2A6NM11 1700 aa13.4□□□□□ -0.26
EXOSC1-204ENST00000370902 PRKAB2O43741 272 aa13.4□□□□□ -0.26
EXOSC1-204ENST00000370902 GLRX3O76003 335 aaKnown RBP13.4□□□□□ -0.26
EXOSC1-204ENST00000370902 DSG3P32926 999 aa13.4□□□□□ -0.26
EXOSC1-204ENST00000370902 ANO1Q5XXA6 986 aa13.4□□□□□ -0.26
EXOSC1-204ENST00000370902 FAM109BQ6ICB4 259 aaPredicted RBP13.4□□□□□ -0.26
EXOSC1-204ENST00000370902 ERC1Q8IUD2 1116 aa13.4□□□□□ -0.26
EXOSC1-204ENST00000370902 ATG4CQ96DT6 458 aa13.4□□□□□ -0.26
EXOSC1-204ENST00000370902 CABP5Q9NP86 173 aa13.4□□□□□ -0.26
EXOSC1-204ENST00000370902 MCM9Q9NXL9 1143 aa13.4□□□□□ -0.26
EXOSC1-204ENST00000370902 CYP2D7A0A087X1C5 515 aa13.39□□□□□ -0.27
EXOSC1-204ENST00000370902 GOLIM4O00461 696 aa13.39□□□□□ -0.27
EXOSC1-204ENST00000370902 SEPT4O43236 478 aa13.39□□□□□ -0.27
EXOSC1-204ENST00000370902 ATP2B2Q01814 1243 aa13.39□□□□□ -0.27
EXOSC1-204ENST00000370902 COG2Q14746 738 aa13.39□□□□□ -0.27
EXOSC1-204ENST00000370902 TMEM132BQ14DG7 1078 aa13.39□□□□□ -0.27
EXOSC1-204ENST00000370902 FAM47AQ5JRC9 791 aa13.39□□□□□ -0.27
EXOSC1-204ENST00000370902 C9orf50Q5SZB4 431 aa13.39□□□□□ -0.27
EXOSC1-204ENST00000370902 TMEM179Q6ZVK1 233 aa13.39□□□□□ -0.27
EXOSC1-204ENST00000370902 REPS2Q8NFH8 660 aa13.39□□□□□ -0.27
EXOSC1-204ENST00000370902 MAML3Q96JK9 1138 aa13.39□□□□□ -0.27
EXOSC1-204ENST00000370902 CRNKL1Q9BZJ0 848 aaKnown RBP13.39□□□□□ -0.27
EXOSC1-204ENST00000370902 ARMT1Q9H993 441 aa13.39□□□□□ -0.27
EXOSC1-204ENST00000370902 CWC22Q9HCG8 908 aaKnown RBP13.39□□□□□ -0.27
EXOSC1-204ENST00000370902 PDLIM7Q9NR12 457 aa13.39□□□□□ -0.27
EXOSC1-204ENST00000370902 ADAMTS5Q9UNA0 930 aa13.39□□□□□ -0.27
EXOSC1-204ENST00000370902 TMX2Q9Y320 296 aa13.39□□□□□ -0.27
EXOSC1-204ENST00000370902 IVNS1ABPQ9Y6Y0 642 aa13.39□□□□□ -0.27
EXOSC1-204ENST00000370902 MYH4Q9Y623 1939 aa13.39□□□□□ -0.27
EXOSC1-204ENST00000370902 POLR3DP05423 398 aaPredicted RBP13.38□□□□□ -0.27
EXOSC1-204ENST00000370902 ITGB8P26012 769 aa13.38□□□□□ -0.27
EXOSC1-204ENST00000370902 CNGA1P29973 690 aa13.38□□□□□ -0.27
EXOSC1-204ENST00000370902 ADD2P35612 726 aa13.38□□□□□ -0.27
EXOSC1-204ENST00000370902 LRRC41Q15345 812 aa13.38□□□□□ -0.27
EXOSC1-204ENST00000370902 TTF1Q15361 905 aaPredicted RBP13.38□□□□□ -0.27
EXOSC1-204ENST00000370902 TRIM60Q495X7 471 aa13.38□□□□□ -0.27
EXOSC1-204ENST00000370902 PRAMEF19Q5SWL8 479 aa13.38□□□□□ -0.27
EXOSC1-204ENST00000370902 SLC39A5Q6ZMH5 540 aa13.38□□□□□ -0.27
EXOSC1-204ENST00000370902 SH3RF1Q7Z6J0 888 aa13.38□□□□□ -0.27
EXOSC1-204ENST00000370902 ABRAQ8N0Z2 381 aa13.38□□□□□ -0.27
EXOSC1-204ENST00000370902 SPICE1Q8N0Z3 855 aa13.38□□□□□ -0.27
EXOSC1-204ENST00000370902 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.38□□□□□ -0.27
EXOSC1-204ENST00000370902 COL25A1Q9BXS0 654 aaPredicted RBP13.38□□□□□ -0.27
EXOSC1-204ENST00000370902 TANGO6Q9C0B7 1094 aa13.38□□□□□ -0.27
EXOSC1-204ENST00000370902 VCPKMTQ9H867 229 aa13.38□□□□□ -0.27
EXOSC1-204ENST00000370902 MCM3APO60318 1980 aa13.38□□□□□ -0.27
EXOSC1-204ENST00000370902 TRIM43BA6NCK2 446 aa13.37□□□□□ -0.27
EXOSC1-204ENST00000370902 MPHOSPH10O00566 681 aaKnown RBP13.37□□□□□ -0.27
EXOSC1-204ENST00000370902 STRNO43815 780 aa13.37□□□□□ -0.27
EXOSC1-204ENST00000370902 MBD4O95243 580 aa13.37□□□□□ -0.27
EXOSC1-204ENST00000370902 HNRNPUQ00839 825 aaKnown RBP eCLIP13.37□□□□□ -0.27
EXOSC1-204ENST00000370902 ICA1Q05084 483 aa13.37□□□□□ -0.27
EXOSC1-204ENST00000370902 SHHQ15465 462 aa13.37□□□□□ -0.27
EXOSC1-204ENST00000370902 C12orf60Q5U649 245 aa13.37□□□□□ -0.27
EXOSC1-204ENST00000370902 MB21D1Q8N884 522 aa13.37□□□□□ -0.27
EXOSC1-204ENST00000370902 TRIM43Q96BQ3 446 aaPredicted RBP13.37□□□□□ -0.27
EXOSC1-204ENST00000370902 DNAJC2Q99543 621 aaKnown RBP13.37□□□□□ -0.27
EXOSC1-204ENST00000370902 FBXO28Q9NVF7 368 aa13.37□□□□□ -0.27
EXOSC1-204ENST00000370902 SWAP70Q9UH65 585 aa13.37□□□□□ -0.27
EXOSC1-204ENST00000370902 ZNF214Q9UL59 606 aaPredicted RBP13.37□□□□□ -0.27
EXOSC1-204ENST00000370902 ATP11BQ9Y2G3 1177 aa13.37□□□□□ -0.27
EXOSC1-204ENST00000370902 WDR46O15213 610 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms