RNA–Protein interactions for RNA: ENST00000369797.7

PDCD11-201, Transcript of programmed cell death 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD11, Length 6,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-201ENST00000369797 ATXN8OSP0DMR3 200 aa12.49□□□□□ -0.41
PDCD11-201ENST00000369797 TUBB4BP68371 445 aa12.49□□□□□ -0.41
PDCD11-201ENST00000369797 TRMT44Q8IYL2 757 aaKnown RBP12.49□□□□□ -0.41
PDCD11-201ENST00000369797 ZNF526Q8TF50 670 aaPredicted RBP12.49□□□□□ -0.41
PDCD11-201ENST00000369797 GTF3C6Q969F1 213 aa12.49□□□□□ -0.41
PDCD11-201ENST00000369797 FAM207AQ9NSI2 230 aaPredicted RBP12.49□□□□□ -0.41
PDCD11-201ENST00000369797 ZNF131P52739 623 aa12.49□□□□□ -0.41
PDCD11-201ENST00000369797 RABEP2Q9H5N1 569 aa12.49□□□□□ -0.41
PDCD11-201ENST00000369797 THRAP3Q9Y2W1 955 aaKnown RBP12.49□□□□□ -0.41
PDCD11-201ENST00000369797 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.49□□□□□ -0.41
PDCD11-201ENST00000369797 ERCC6LQ2NKX8 1250 aa12.49□□□□□ -0.41
PDCD11-201ENST00000369797 XKR9Q5GH70 373 aa12.49□□□□□ -0.41
PDCD11-201ENST00000369797 SMC5Q8IY18 1101 aa12.49□□□□□ -0.41
PDCD11-201ENST00000369797 PPFIBP2Q8ND30 876 aa12.49□□□□□ -0.41
PDCD11-201ENST00000369797 EDC3Q96F86 508 aaKnown RBP12.49□□□□□ -0.41
PDCD11-201ENST00000369797 SEC24BO95487 1268 aa12.49□□□□□ -0.41
PDCD11-201ENST00000369797 LIG4P49917 911 aa12.49□□□□□ -0.41
PDCD11-201ENST00000369797 NEDD9Q14511 834 aa12.49□□□□□ -0.41
PDCD11-201ENST00000369797 NAA25Q14CX7 972 aa12.49□□□□□ -0.41
PDCD11-201ENST00000369797 POSTNQ15063 836 aa12.49□□□□□ -0.41
PDCD11-201ENST00000369797 TRAPPC8Q9Y2L5 1435 aa12.49□□□□□ -0.41
PDCD11-201ENST00000369797 GOLGA8HP0CJ92 632 aa12.49□□□□□ -0.41
PDCD11-201ENST00000369797 CTSWP56202 376 aa12.49□□□□□ -0.41
PDCD11-201ENST00000369797 LACTBP83111 547 aaPredicted RBP12.49□□□□□ -0.41
PDCD11-201ENST00000369797 HHATQ5VTY9 493 aa12.49□□□□□ -0.41
PDCD11-201ENST00000369797 SFMBT2Q5VUG0 894 aa12.49□□□□□ -0.41
PDCD11-201ENST00000369797 GPBP1Q86WP2 473 aa12.49□□□□□ -0.41
PDCD11-201ENST00000369797 ZBTB8OSQ8IWT0 167 aa12.49□□□□□ -0.41
PDCD11-201ENST00000369797 NUP58Q9BVL2 599 aa12.49□□□□□ -0.41
PDCD11-201ENST00000369797 PRAG1Q86YV5 1406 aa12.48□□□□□ -0.41
PDCD11-201ENST00000369797 SDR42E1Q8WUS8 393 aa12.48□□□□□ -0.41
PDCD11-201ENST00000369797 NBPF3Q9H094 633 aa12.48□□□□□ -0.41
PDCD11-201ENST00000369797 ARPP21Q9UBL0 812 aaPredicted RBP12.48□□□□□ -0.41
PDCD11-201ENST00000369797 UHRF1BP1Q6BDS2 1440 aa12.48□□□□□ -0.41
PDCD11-201ENST00000369797 JAK2O60674 1132 aa12.48□□□□□ -0.41
PDCD11-201ENST00000369797 APOL6Q9BWW8 343 aa12.48□□□□□ -0.41
PDCD11-201ENST00000369797 FLOT1O75955 427 aa12.48□□□□□ -0.41
PDCD11-201ENST00000369797 KRT15P19012 456 aa12.48□□□□□ -0.41
PDCD11-201ENST00000369797 IL13P35225 146 aa12.48□□□□□ -0.41
PDCD11-201ENST00000369797 RRAGAQ7L523 313 aa12.48□□□□□ -0.41
PDCD11-201ENST00000369797 CACYBPQ9HB71 228 aaKnown RBP12.48□□□□□ -0.41
PDCD11-201ENST00000369797 NFE2L3Q9Y4A8 694 aa12.48□□□□□ -0.41
PDCD11-201ENST00000369797 TBC1D8O95759 1140 aa12.48□□□□□ -0.41
PDCD11-201ENST00000369797 KRT81Q14533 505 aa12.48□□□□□ -0.41
PDCD11-201ENST00000369797 CERKLQ49MI3 558 aaPredicted RBP12.48□□□□□ -0.41
PDCD11-201ENST00000369797 DCAF15Q66K64 600 aa12.48□□□□□ -0.41
PDCD11-201ENST00000369797 VPS37BQ9H9H4 285 aa12.48□□□□□ -0.41
PDCD11-201ENST00000369797 MYCP01106 439 aaPredicted RBP12.48□□□□□ -0.41
PDCD11-201ENST00000369797 U2AF2P26368 475 aaKnown RBP eCLIP12.48□□□□□ -0.412e-6■■■■□ 21.8
PDCD11-201ENST00000369797 TECP42680 631 aa12.48□□□□□ -0.41
PDCD11-201ENST00000369797 TYW1BQ6NUM6 668 aa12.48□□□□□ -0.41
PDCD11-201ENST00000369797 PEX26Q7Z412 305 aa12.48□□□□□ -0.41
PDCD11-201ENST00000369797 SRGAP1Q7Z6B7 1085 aa12.48□□□□□ -0.41
PDCD11-201ENST00000369797 MLKLQ8NB16 471 aa12.48□□□□□ -0.41
PDCD11-201ENST00000369797 PSTPIP2Q9H939 334 aa12.48□□□□□ -0.41
PDCD11-201ENST00000369797 SYNJ2BP-COX16A0A087WUM0 186 aa12.47□□□□□ -0.41
PDCD11-201ENST00000369797 TTC36A6NLP5 189 aa12.47□□□□□ -0.41
PDCD11-201ENST00000369797 ABCB4P21439 1286 aa12.47□□□□□ -0.41
PDCD11-201ENST00000369797 BCAMP50895 628 aa12.47□□□□□ -0.41
PDCD11-201ENST00000369797 COX16Q9P0S2 106 aa12.47□□□□□ -0.41
PDCD11-201ENST00000369797 E7EWF7 191 aa12.47□□□□□ -0.41
PDCD11-201ENST00000369797 U2AF1L4Q8WU68 220 aaKnown RBP12.47□□□□□ -0.41
PDCD11-201ENST00000369797 SLF1Q9BQI6 1058 aa12.47□□□□□ -0.41
PDCD11-201ENST00000369797 LSM14BQ9BX40 385 aaKnown RBP12.47□□□□□ -0.41
PDCD11-201ENST00000369797 SEPT10Q9P0V9 454 aa12.47□□□□□ -0.41
PDCD11-201ENST00000369797 IGSF3O75054 1194 aa12.47□□□□□ -0.41
PDCD11-201ENST00000369797 POLR2MP0CAP2 368 aa12.47□□□□□ -0.41
PDCD11-201ENST00000369797 YWHAEP62258 255 aaKnown RBP12.47□□□□□ -0.41
PDCD11-201ENST00000369797 ADPGKQ9BRR6 497 aa12.47□□□□□ -0.41
PDCD11-201ENST00000369797 IFNB1P01574 187 aa12.47□□□□□ -0.41
PDCD11-201ENST00000369797 DIXDC1Q155Q3 683 aa12.47□□□□□ -0.41
PDCD11-201ENST00000369797 CTAGE3PQ8IX95 158 aa12.47□□□□□ -0.41
PDCD11-201ENST00000369797 ATP8A2Q9NTI2 1148 aa12.47□□□□□ -0.41
PDCD11-201ENST00000369797 ATP10BO94823 1461 aa12.47□□□□□ -0.41
PDCD11-201ENST00000369797 PTPROQ16827 1216 aa12.47□□□□□ -0.41
PDCD11-201ENST00000369797 TAOK1Q7L7X3 1001 aa12.47□□□□□ -0.41
PDCD11-201ENST00000369797 TRIM50Q86XT4 487 aa12.47□□□□□ -0.41
PDCD11-201ENST00000369797 IFT20Q8IY31 132 aa12.47□□□□□ -0.41
PDCD11-201ENST00000369797 ZNF654Q8IZM8 581 aa12.47□□□□□ -0.41
PDCD11-201ENST00000369797 SGSM2O43147 1006 aa12.46□□□□□ -0.41
PDCD11-201ENST00000369797 NLRP12P59046 1061 aa12.46□□□□□ -0.41
PDCD11-201ENST00000369797 K7ENM7 598 aa12.46□□□□□ -0.41
PDCD11-201ENST00000369797 TNNC2P02585 160 aa12.46□□□□□ -0.41
PDCD11-201ENST00000369797 RPS6KA1Q15418 735 aa12.46□□□□□ -0.41
PDCD11-201ENST00000369797 NT5C3AQ9H0P0 336 aa12.46□□□□□ -0.41
PDCD11-201ENST00000369797 HOXB7P09629 217 aa12.46□□□□□ -0.41
PDCD11-201ENST00000369797 PABPC4Q13310 644 aaKnown RBP eCLIP12.46□□□□□ -0.412e-6■■□□□ 13.7
PDCD11-201ENST00000369797 Q3C1V9 767 aa12.46□□□□□ -0.41
PDCD11-201ENST00000369797 LGSNQ5TDP6 509 aa12.46□□□□□ -0.41
PDCD11-201ENST00000369797 CDC37L1Q7L3B6 337 aa12.46□□□□□ -0.41
PDCD11-201ENST00000369797 RSAD2Q8WXG1 361 aa12.46□□□□□ -0.41
PDCD11-201ENST00000369797 SERTAD1Q9UHV2 236 aa12.46□□□□□ -0.41
PDCD11-201ENST00000369797 CLRN2A0PK11 232 aa12.46□□□□□ -0.42
PDCD11-201ENST00000369797 DLATP10515 647 aaKnown RBP12.46□□□□□ -0.42
PDCD11-201ENST00000369797 BTDP43251 543 aa12.46□□□□□ -0.42
PDCD11-201ENST00000369797 TSTA3Q13630 321 aaPredicted RBP12.46□□□□□ -0.42
PDCD11-201ENST00000369797 NOP9Q86U38 636 aaKnown RBP12.46□□□□□ -0.42
PDCD11-201ENST00000369797 MRPL11Q9Y3B7 192 aaKnown RBP12.46□□□□□ -0.42
PDCD11-201ENST00000369797 ICA1Q05084 483 aa12.46□□□□□ -0.42
PDCD11-201ENST00000369797 MTX1Q13505 466 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms