RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 PES1O00541 588 aaKnown RBP13.09□□□□□ -0.31
RAB39B-201ENST00000369454 SLU7O95391 586 aaKnown RBP13.09□□□□□ -0.31
RAB39B-201ENST00000369454 TSPY3P0CV98 308 aa13.09□□□□□ -0.31
RAB39B-201ENST00000369454 TSPY8P0CW00 308 aa13.09□□□□□ -0.31
RAB39B-201ENST00000369454 TOGARAM2Q6ZUX3 1019 aa13.09□□□□□ -0.31
RAB39B-201ENST00000369454 ANKRD2Q9GZV1 360 aa13.09□□□□□ -0.31
RAB39B-201ENST00000369454 CTNND2Q9UQB3 1225 aa13.09□□□□□ -0.31
RAB39B-201ENST00000369454 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.09□□□□□ -0.31
RAB39B-201ENST00000369454 PHLPP1O60346 1717 aa13.09□□□□□ -0.31
RAB39B-201ENST00000369454 CALM1P0DP23 149 aa13.09□□□□□ -0.31
RAB39B-201ENST00000369454 CALM2P0DP24 149 aa13.09□□□□□ -0.31
RAB39B-201ENST00000369454 CALM3P0DP25 149 aa13.09□□□□□ -0.31
RAB39B-201ENST00000369454 SARSP49591 514 aaKnown RBP13.09□□□□□ -0.31
RAB39B-201ENST00000369454 PLCD1P51178 756 aa13.09□□□□□ -0.31
RAB39B-201ENST00000369454 DACH1Q9UI36 760 aa13.09□□□□□ -0.31
RAB39B-201ENST00000369454 SLFN14P0C7P3 912 aa13.08□□□□□ -0.32
RAB39B-201ENST00000369454 SPECC1LQ69YQ0 1117 aa13.08□□□□□ -0.32
RAB39B-201ENST00000369454 RCSD1Q6JBY9 416 aa13.08□□□□□ -0.32
RAB39B-201ENST00000369454 FAM196AQ6ZSG2 479 aa13.08□□□□□ -0.32
RAB39B-201ENST00000369454 IL17RBQ9NRM6 502 aa13.08□□□□□ -0.32
RAB39B-201ENST00000369454 ATP8A2Q9NTI2 1148 aa13.08□□□□□ -0.32
RAB39B-201ENST00000369454 PLCH1Q4KWH8 1693 aa13.08□□□□□ -0.32
RAB39B-201ENST00000369454 FAM205AQ6ZU69 1335 aa13.08□□□□□ -0.32
RAB39B-201ENST00000369454 DDAH1O94760 285 aa13.08□□□□□ -0.32
RAB39B-201ENST00000369454 KANK3Q6NY19 840 aa13.08□□□□□ -0.32
RAB39B-201ENST00000369454 ZNF579Q8NAF0 562 aaKnown RBP13.08□□□□□ -0.32
RAB39B-201ENST00000369454 ARAP2Q8WZ64 1704 aa13.08□□□□□ -0.32
RAB39B-201ENST00000369454 SYNRGQ9UMZ2 1314 aa13.08□□□□□ -0.32
RAB39B-201ENST00000369454 CUL4BQ13620 913 aa13.08□□□□□ -0.32
RAB39B-201ENST00000369454 SLC10A5Q5PT55 438 aa13.08□□□□□ -0.32
RAB39B-201ENST00000369454 RRAGBQ5VZM2 374 aa13.08□□□□□ -0.32
RAB39B-201ENST00000369454 TYW1BQ6NUM6 668 aa13.08□□□□□ -0.32
RAB39B-201ENST00000369454 ENOX1Q8TC92 643 aaKnown RBP13.08□□□□□ -0.32
RAB39B-201ENST00000369454 MTA3Q9BTC8 594 aa13.08□□□□□ -0.32
RAB39B-201ENST00000369454 IRX2Q9BZI1 471 aaPredicted RBP13.08□□□□□ -0.32
RAB39B-201ENST00000369454 EPC1Q9H2F5 836 aa13.08□□□□□ -0.32
RAB39B-201ENST00000369454 ARPP21Q9UBL0 812 aaPredicted RBP13.08□□□□□ -0.32
RAB39B-201ENST00000369454 NID2Q14112 1375 aa13.07□□□□□ -0.32
RAB39B-201ENST00000369454 MYH6P13533 1939 aa13.07□□□□□ -0.32
RAB39B-201ENST00000369454 CACNA1SQ13698 1873 aa13.07□□□□□ -0.32
RAB39B-201ENST00000369454 PSDA5PKW4 1024 aaPredicted RBP13.07□□□□□ -0.32
RAB39B-201ENST00000369454 TM4SF1P30408 202 aa13.07□□□□□ -0.32
RAB39B-201ENST00000369454 GNG11P61952 73 aa13.07□□□□□ -0.32
RAB39B-201ENST00000369454 DPYDQ12882 1025 aa13.07□□□□□ -0.32
RAB39B-201ENST00000369454 DHX8Q14562 1220 aaKnown RBP13.07□□□□□ -0.32
RAB39B-201ENST00000369454 IL17AQ16552 155 aa13.07□□□□□ -0.32
RAB39B-201ENST00000369454 KMT5BQ4FZB7 885 aa13.07□□□□□ -0.32
RAB39B-201ENST00000369454 ZNF444Q8N0Y2 327 aaPredicted RBP13.07□□□□□ -0.32
RAB39B-201ENST00000369454 CCDC34Q96HJ3 373 aa13.07□□□□□ -0.32
RAB39B-201ENST00000369454 PPP2R2CQ9Y2T4 447 aa13.07□□□□□ -0.32
RAB39B-201ENST00000369454 RCAN1P53805 252 aa13.07□□□□□ -0.32
RAB39B-201ENST00000369454 ETF1P62495 437 aaKnown RBP13.07□□□□□ -0.32
RAB39B-201ENST00000369454 PPP2R5BQ15173 497 aa13.07□□□□□ -0.32
RAB39B-201ENST00000369454 INF2Q27J81 1249 aa13.07□□□□□ -0.32
RAB39B-201ENST00000369454 FBXO38Q6PIJ6 1188 aa13.07□□□□□ -0.32
RAB39B-201ENST00000369454 VPS16Q9H269 839 aa13.07□□□□□ -0.32
RAB39B-201ENST00000369454 LZTFL1Q9NQ48 299 aa13.07□□□□□ -0.32
RAB39B-201ENST00000369454 A0A0U1RQJ8 604 aa13.06□□□□□ -0.32
RAB39B-201ENST00000369454 SOWAHDA6NJG2 315 aa13.06□□□□□ -0.32
RAB39B-201ENST00000369454 F8W031 263 aaPredicted RBP13.06□□□□□ -0.32
RAB39B-201ENST00000369454 FANCGO15287 622 aa13.06□□□□□ -0.32
RAB39B-201ENST00000369454 ZNF18P17022 549 aa13.06□□□□□ -0.32
RAB39B-201ENST00000369454 TC2NQ8N9U0 490 aa13.06□□□□□ -0.32
RAB39B-201ENST00000369454 CNBD1Q8NA66 436 aa13.06□□□□□ -0.32
RAB39B-201ENST00000369454 ATRIPQ8WXE1 791 aa13.06□□□□□ -0.32
RAB39B-201ENST00000369454 UBAP1LF5GYI3 381 aa13.06□□□□□ -0.32
RAB39B-201ENST00000369454 ORC4O43929 436 aa13.06□□□□□ -0.32
RAB39B-201ENST00000369454 TRAPPC3LQ5T215 181 aa13.06□□□□□ -0.32
RAB39B-201ENST00000369454 ZSWIM4Q9H7M6 989 aa13.06□□□□□ -0.32
RAB39B-201ENST00000369454 BCORQ6W2J9 1755 aa13.06□□□□□ -0.32
RAB39B-201ENST00000369454 TIAM2Q8IVF5 1701 aa13.06□□□□□ -0.32
RAB39B-201ENST00000369454 DUOX1Q9NRD9 1551 aa13.06□□□□□ -0.32
RAB39B-201ENST00000369454 CCDC194A0A1B0GVG4 234 aa13.06□□□□□ -0.32
RAB39B-201ENST00000369454 KIF5BP33176 963 aa13.06□□□□□ -0.32
RAB39B-201ENST00000369454 EIF6P56537 245 aaKnown RBP13.06□□□□□ -0.32
RAB39B-201ENST00000369454 PFKFB3Q16875 520 aaPredicted RBP13.06□□□□□ -0.32
RAB39B-201ENST00000369454 NT5DC1Q5TFE4 455 aa13.06□□□□□ -0.32
RAB39B-201ENST00000369454 RGS22Q8NE09 1264 aa13.06□□□□□ -0.32
RAB39B-201ENST00000369454 TNFRSF25Q93038 417 aa13.06□□□□□ -0.32
RAB39B-201ENST00000369454 FERMT2Q96AC1 680 aa13.06□□□□□ -0.32
RAB39B-201ENST00000369454 ERO1AQ96HE7 468 aa13.06□□□□□ -0.32
RAB39B-201ENST00000369454 NOL10Q9BSC4 688 aaKnown RBP13.06□□□□□ -0.32
RAB39B-201ENST00000369454 USP21Q9UK80 565 aa13.06□□□□□ -0.32
RAB39B-201ENST00000369454 XDHP47989 1333 aa13.06□□□□□ -0.32
RAB39B-201ENST00000369454 CNTNAP4Q9C0A0 1308 aa13.06□□□□□ -0.32
RAB39B-201ENST00000369454 SEMA3EO15041 775 aa13.05□□□□□ -0.32
RAB39B-201ENST00000369454 UFL1O94874 794 aa13.05□□□□□ -0.32
RAB39B-201ENST00000369454 ATP2C1P98194 919 aaPredicted RBP13.05□□□□□ -0.32
RAB39B-201ENST00000369454 C12orf60Q5U649 245 aa13.05□□□□□ -0.32
RAB39B-201ENST00000369454 REXO1L1PQ8IX06 675 aa13.05□□□□□ -0.32
RAB39B-201ENST00000369454 BLIDQ8IZY5 108 aa13.05□□□□□ -0.32
RAB39B-201ENST00000369454 IGSF22Q8N9C0 903 aa13.05□□□□□ -0.32
RAB39B-201ENST00000369454 WDR24Q96S15 920 aa13.05□□□□□ -0.32
RAB39B-201ENST00000369454 CGNQ9P2M7 1197 aaKnown RBP13.05□□□□□ -0.32
RAB39B-201ENST00000369454 GDAQ9Y2T3 454 aa13.05□□□□□ -0.32
RAB39B-201ENST00000369454 KIF2AO00139 706 aaPredicted RBP13.05□□□□□ -0.32
RAB39B-201ENST00000369454 RBL2Q08999 1139 aa13.05□□□□□ -0.32
RAB39B-201ENST00000369454 TMEM139Q8IV31 216 aa13.05□□□□□ -0.32
RAB39B-201ENST00000369454 IQUBQ8NA54 791 aa13.05□□□□□ -0.32
RAB39B-201ENST00000369454 MNS1Q8NEH6 495 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms