RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 CPDO75976 1380 aa11.35□□□□□ -0.59
SCNM1-202ENST00000368905 E2F6O75461 281 aa11.35□□□□□ -0.59
SCNM1-202ENST00000368905 PHKG2P15735 406 aa11.35□□□□□ -0.59
SCNM1-202ENST00000368905 TNFAIP3P21580 790 aa11.35□□□□□ -0.59
SCNM1-202ENST00000368905 SSTR3P32745 418 aaPredicted RBP11.35□□□□□ -0.59
SCNM1-202ENST00000368905 CLEC17AQ6ZS10 378 aa11.35□□□□□ -0.59
SCNM1-202ENST00000368905 TTC8Q8TAM2 541 aa11.35□□□□□ -0.59
SCNM1-202ENST00000368905 DDX17Q92841 729 aaKnown RBP11.35□□□□□ -0.59
SCNM1-202ENST00000368905 TRMT2BQ96GJ1 504 aaKnown RBP11.35□□□□□ -0.59
SCNM1-202ENST00000368905 FAM81BQ96LP2 452 aa11.35□□□□□ -0.59
SCNM1-202ENST00000368905 SRPK1Q96SB4 655 aaKnown RBP11.35□□□□□ -0.59
SCNM1-202ENST00000368905 TMUB1Q9BVT8 246 aa11.35□□□□□ -0.59
SCNM1-202ENST00000368905 RBSNQ9H1K0 784 aa11.35□□□□□ -0.59
SCNM1-202ENST00000368905 KANSL2Q9H9L4 492 aa11.35□□□□□ -0.59
SCNM1-202ENST00000368905 CFAP45Q9UL16 551 aa11.35□□□□□ -0.59
SCNM1-202ENST00000368905 CCDC196A0A1B0GTZ2 297 aa11.34□□□□□ -0.59
SCNM1-202ENST00000368905 AKR1B10O60218 316 aa11.34□□□□□ -0.59
SCNM1-202ENST00000368905 GLRX3O76003 335 aaKnown RBP11.34□□□□□ -0.59
SCNM1-202ENST00000368905 ARIH2O95376 493 aa11.34□□□□□ -0.59
SCNM1-202ENST00000368905 CD2BP2O95400 341 aaKnown RBP11.34□□□□□ -0.59
SCNM1-202ENST00000368905 RAC2P15153 192 aa11.34□□□□□ -0.59
SCNM1-202ENST00000368905 CHMP4BP1P59074 171 aa11.34□□□□□ -0.59
SCNM1-202ENST00000368905 SMC1AQ14683 1233 aaKnown RBP11.34□□□□□ -0.59
SCNM1-202ENST00000368905 ZSCAN29Q8IWY8 852 aaPredicted RBP11.34□□□□□ -0.59
SCNM1-202ENST00000368905 TTC5Q8N0Z6 440 aa11.34□□□□□ -0.59
SCNM1-202ENST00000368905 CDV3Q9UKY7 258 aaKnown RBP11.34□□□□□ -0.59
SCNM1-202ENST00000368905 AK9Q5TCS8 1911 aa11.34□□□□□ -0.59
SCNM1-202ENST00000368905 SPATA31A3Q5VYP0 1347 aa11.34□□□□□ -0.59
SCNM1-202ENST00000368905 USP42Q9H9J4 1324 aaKnown RBP11.34□□□□□ -0.59
SCNM1-202ENST00000368905 COL18A1P39060 1754 aa11.33□□□□□ -0.6
SCNM1-202ENST00000368905 H3BRB1 525 aa11.33□□□□□ -0.6
SCNM1-202ENST00000368905 INMTO95050 263 aa11.33□□□□□ -0.6
SCNM1-202ENST00000368905 HOXA10P31260 410 aaPredicted RBP11.33□□□□□ -0.6
SCNM1-202ENST00000368905 ZSCAN26Q16670 478 aa11.33□□□□□ -0.6
SCNM1-202ENST00000368905 INF2Q27J81 1249 aa11.33□□□□□ -0.6
SCNM1-202ENST00000368905 PPP2R2DQ66LE6 453 aa11.33□□□□□ -0.6
SCNM1-202ENST00000368905 IRGCQ6NXR0 463 aa11.33□□□□□ -0.6
SCNM1-202ENST00000368905 ZBTB10Q96DT7 871 aa11.33□□□□□ -0.6
SCNM1-202ENST00000368905 MMTAG2Q9BU76 263 aaKnown RBP11.33□□□□□ -0.6
SCNM1-202ENST00000368905 TUT1Q9H6E5 874 aaKnown RBP11.33□□□□□ -0.6
SCNM1-202ENST00000368905 IL1RAPL2Q9NP60 686 aa11.33□□□□□ -0.6
SCNM1-202ENST00000368905 PDRG1Q9NUG6 133 aa11.33□□□□□ -0.6
SCNM1-202ENST00000368905 EXOC1Q9NV70 894 aa11.33□□□□□ -0.6
SCNM1-202ENST00000368905 MAGED1Q9Y5V3 778 aaPredicted RBP11.33□□□□□ -0.6
SCNM1-202ENST00000368905 UTYO14607 1347 aa11.33□□□□□ -0.6
SCNM1-202ENST00000368905 SOS2Q07890 1332 aaPredicted RBP11.33□□□□□ -0.6
SCNM1-202ENST00000368905 GRM8O00222 908 aa11.33□□□□□ -0.6
SCNM1-202ENST00000368905 SNRPA1P09661 255 aaKnown RBP11.33□□□□□ -0.6
SCNM1-202ENST00000368905 PRPHP41219 470 aa11.33□□□□□ -0.6
SCNM1-202ENST00000368905 HALP42357 657 aa11.33□□□□□ -0.6
SCNM1-202ENST00000368905 HSD17B7P56937 341 aa11.33□□□□□ -0.6
SCNM1-202ENST00000368905 TRDNQ13061 729 aa11.33□□□□□ -0.6
SCNM1-202ENST00000368905 MYBPC3Q14896 1274 aa11.33□□□□□ -0.6
SCNM1-202ENST00000368905 RIC3Q7Z5B4 369 aa11.33□□□□□ -0.6
SCNM1-202ENST00000368905 RUFY2Q8WXA3 655 aa11.33□□□□□ -0.6
SCNM1-202ENST00000368905 MRGBPQ9NV56 204 aa11.33□□□□□ -0.6
SCNM1-202ENST00000368905 CNTN3Q9P232 1028 aa11.33□□□□□ -0.6
SCNM1-202ENST00000368905 COL16A1Q07092 1604 aaPredicted RBP11.32□□□□□ -0.6
SCNM1-202ENST00000368905 ANXA1P04083 346 aa11.32□□□□□ -0.6
SCNM1-202ENST00000368905 HIC1Q14526 733 aa11.32□□□□□ -0.6
SCNM1-202ENST00000368905 ARSHQ5FYA8 562 aa11.32□□□□□ -0.6
SCNM1-202ENST00000368905 KIAA1211Q6ZU35 1233 aa11.32□□□□□ -0.6
SCNM1-202ENST00000368905 CKAP2LQ8IYA6 745 aa11.32□□□□□ -0.6
SCNM1-202ENST00000368905 FAM184AQ8NB25 1140 aa11.32□□□□□ -0.6
SCNM1-202ENST00000368905 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.32□□□□□ -0.65e-9■■■■■ 31.6
SCNM1-202ENST00000368905 CLIP2Q9UDT6 1046 aa11.32□□□□□ -0.6
SCNM1-202ENST00000368905 DCTN4Q9UJW0 460 aa11.32□□□□□ -0.6
SCNM1-202ENST00000368905 MRC1P22897 1456 aa11.32□□□□□ -0.6
SCNM1-202ENST00000368905 KRT38O76015 456 aa11.31□□□□□ -0.6
SCNM1-202ENST00000368905 P4HBP07237 508 aaKnown RBP11.31□□□□□ -0.6
SCNM1-202ENST00000368905 G3BP1Q13283 466 aaKnown RBP eCLIP11.31□□□□□ -0.6
SCNM1-202ENST00000368905 TRIM74Q86UV6 250 aa11.31□□□□□ -0.6
SCNM1-202ENST00000368905 TRIM73Q86UV7 250 aa11.31□□□□□ -0.6
SCNM1-202ENST00000368905 ZNF354CQ86Y25 554 aa11.31□□□□□ -0.6
SCNM1-202ENST00000368905 NUTM1Q86Y26 1132 aa11.31□□□□□ -0.6
SCNM1-202ENST00000368905 TRIM11Q96F44 468 aa11.31□□□□□ -0.6
SCNM1-202ENST00000368905 SCLT1Q96NL6 688 aa11.31□□□□□ -0.6
SCNM1-202ENST00000368905 FAM126AQ9BYI3 521 aaPredicted RBP11.31□□□□□ -0.6
SCNM1-202ENST00000368905 CRYBG1Q9Y4K1 1723 aa11.31□□□□□ -0.6
SCNM1-202ENST00000368905 KDM6AO15550 1401 aaPredicted RBP11.31□□□□□ -0.6
SCNM1-202ENST00000368905 PKD1L3Q7Z443 1732 aa11.31□□□□□ -0.6
SCNM1-202ENST00000368905 MAP3K7O43318 606 aa11.31□□□□□ -0.6
SCNM1-202ENST00000368905 NEK4P51957 841 aa11.31□□□□□ -0.6
SCNM1-202ENST00000368905 MRPL28Q13084 256 aaKnown RBP11.31□□□□□ -0.6
SCNM1-202ENST00000368905 ARMC4Q5T2S8 1044 aa11.31□□□□□ -0.6
SCNM1-202ENST00000368905 CYP26C1Q6V0L0 522 aa11.31□□□□□ -0.6
SCNM1-202ENST00000368905 CCDC129Q6ZRS4 1044 aa11.31□□□□□ -0.6
SCNM1-202ENST00000368905 PI4K2BQ8TCG2 481 aa11.31□□□□□ -0.6
SCNM1-202ENST00000368905 HVCN1Q96D96 273 aa11.31□□□□□ -0.6
SCNM1-202ENST00000368905 PLEKHA5Q9HAU0 1116 aa11.31□□□□□ -0.6
SCNM1-202ENST00000368905 TRPV5Q9NQA5 729 aa11.31□□□□□ -0.6
SCNM1-202ENST00000368905 ATP8A1Q9Y2Q0 1164 aa11.31□□□□□ -0.6
SCNM1-202ENST00000368905 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.31□□□□□ -0.6
SCNM1-202ENST00000368905 MEGF6O75095 1541 aa11.3□□□□□ -0.6
SCNM1-202ENST00000368905 HIP1O00291 1037 aa11.3□□□□□ -0.6
SCNM1-202ENST00000368905 MYCLP1P12525 358 aaPredicted RBP11.3□□□□□ -0.6
SCNM1-202ENST00000368905 CCNCP24863 283 aa11.3□□□□□ -0.6
SCNM1-202ENST00000368905 HPDP32754 393 aaPredicted RBP11.3□□□□□ -0.6
SCNM1-202ENST00000368905 CLCN1P35523 988 aa11.3□□□□□ -0.6
SCNM1-202ENST00000368905 ROR1Q01973 937 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms