RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 ERVK-9P63128 1117 aa22.62■■□□□ 1.21
CKS1B-203ENST00000368439 ERVK-24P63145 666 aa22.62■■□□□ 1.21
CKS1B-203ENST00000368439 IRF5Q13568 498 aa22.62■■□□□ 1.21
CKS1B-203ENST00000368439 COA7Q96BR5 231 aa22.62■■□□□ 1.21
CKS1B-203ENST00000368439 NAPBQ9H115 298 aa22.62■■□□□ 1.21
CKS1B-203ENST00000368439 MKNK2Q9HBH9 465 aa22.62■■□□□ 1.21
CKS1B-203ENST00000368439 GJD2Q9UKL4 321 aa22.62■■□□□ 1.21
CKS1B-203ENST00000368439 MYH4Q9Y623 1939 aa22.61■■□□□ 1.21
CKS1B-203ENST00000368439 IGKV6D-41A0A0C4DH26 115 aa22.61■■□□□ 1.21
CKS1B-203ENST00000368439 SPDYE16A6NNV3 312 aaPredicted RBP22.61■■□□□ 1.21
CKS1B-203ENST00000368439 PPARAQ07869 468 aa22.61■■□□□ 1.21
CKS1B-203ENST00000368439 NMIQ13287 307 aaPredicted RBP22.61■■□□□ 1.21
CKS1B-203ENST00000368439 MCMDC2Q4G0Z9 681 aa22.61■■□□□ 1.21
CKS1B-203ENST00000368439 RILPL2Q969X0 211 aa22.61■■□□□ 1.21
CKS1B-203ENST00000368439 VCPKMTQ9H867 229 aa22.61■■□□□ 1.21
CKS1B-203ENST00000368439 RABGAP1Q9Y3P9 1069 aa22.61■■□□□ 1.21
CKS1B-203ENST00000368439 PRDM1O75626 825 aa22.6■■□□□ 1.21
CKS1B-203ENST00000368439 PXYLP1Q8TE99 480 aa22.6■■□□□ 1.21
CKS1B-203ENST00000368439 LPAR1Q92633 364 aa22.6■■□□□ 1.21
CKS1B-203ENST00000368439 PAGR1Q9BTK6 254 aa22.6■■□□□ 1.21
CKS1B-203ENST00000368439 PORCNQ9H237 461 aa22.6■■□□□ 1.21
CKS1B-203ENST00000368439 SH2D4AQ9H788 454 aa22.6■■□□□ 1.21
CKS1B-203ENST00000368439 MKI67P46013 3256 aaKnown RBP22.59■■□□□ 1.21
CKS1B-203ENST00000368439 ADCY3O60266 1144 aa22.59■■□□□ 1.21
CKS1B-203ENST00000368439 SDSP20132 328 aa22.59■■□□□ 1.21
CKS1B-203ENST00000368439 MTFR1Q15390 333 aa22.59■■□□□ 1.21
CKS1B-203ENST00000368439 ALX1Q15699 326 aa22.59■■□□□ 1.21
CKS1B-203ENST00000368439 ZNF589Q86UQ0 364 aaPredicted RBP22.59■■□□□ 1.21
CKS1B-203ENST00000368439 SLAIN1Q8ND83 568 aa22.59■■□□□ 1.21
CKS1B-203ENST00000368439 BTBD7Q9P203 1132 aa22.59■■□□□ 1.21
CKS1B-203ENST00000368439 TACC3Q9Y6A5 838 aa22.59■■□□□ 1.21
CKS1B-203ENST00000368439 COG2Q14746 738 aa22.58■■□□□ 1.21
CKS1B-203ENST00000368439 SPICE1Q8N0Z3 855 aa22.58■■□□□ 1.21
CKS1B-203ENST00000368439 NYAP2Q9P242 653 aa22.58■■□□□ 1.21
CKS1B-203ENST00000368439 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.58■■□□□ 1.21
CKS1B-203ENST00000368439 PLIN4Q96Q06 1357 aa22.58■■□□□ 1.21
CKS1B-203ENST00000368439 MYCP01106 439 aaPredicted RBP22.57■■□□□ 1.2
CKS1B-203ENST00000368439 ELNP15502 786 aa22.57■■□□□ 1.2
CKS1B-203ENST00000368439 EN2P19622 333 aaPredicted RBP22.57■■□□□ 1.2
CKS1B-203ENST00000368439 ZNF444Q8N0Y2 327 aaPredicted RBP22.57■■□□□ 1.2
CKS1B-203ENST00000368439 TMEM106CQ9BVX2 250 aa22.57■■□□□ 1.2
CKS1B-203ENST00000368439 TANGO6Q9C0B7 1094 aa22.57■■□□□ 1.2
CKS1B-203ENST00000368439 ZNF287Q9HBT7 754 aa22.57■■□□□ 1.2
CKS1B-203ENST00000368439 ANAPC4Q9UJX5 808 aa22.57■■□□□ 1.2
CKS1B-203ENST00000368439 COL11A1P12107 1806 aaPredicted RBP22.57■■□□□ 1.2
CKS1B-203ENST00000368439 WDR46O15213 610 aaKnown RBP22.56■■□□□ 1.2
CKS1B-203ENST00000368439 HSPD1P10809 573 aaKnown RBP22.56■■□□□ 1.2
CKS1B-203ENST00000368439 MAPK4P31152 587 aa22.56■■□□□ 1.2
CKS1B-203ENST00000368439 DSG3P32926 999 aa22.56■■□□□ 1.2
CKS1B-203ENST00000368439 ATP2B2Q01814 1243 aa22.56■■□□□ 1.2
CKS1B-203ENST00000368439 CTDSPL2Q05D32 466 aa22.56■■□□□ 1.2
CKS1B-203ENST00000368439 NEDD1Q8NHV4 660 aa22.56■■□□□ 1.2
CKS1B-203ENST00000368439 USP6NLQ92738 828 aa22.56■■□□□ 1.2
CKS1B-203ENST00000368439 HOXC10Q9NYD6 342 aa22.56■■□□□ 1.2
CKS1B-203ENST00000368439 CCDC171Q6TFL3 1326 aa22.56■■□□□ 1.2
CKS1B-203ENST00000368439 FGAP02671 866 aa22.55■■□□□ 1.2
CKS1B-203ENST00000368439 PDE4BQ07343 736 aa22.55■■□□□ 1.2
CKS1B-203ENST00000368439 GPR142Q7Z601 462 aa22.55■■□□□ 1.2
CKS1B-203ENST00000368439 MKL1Q969V6 931 aa22.55■■□□□ 1.2
CKS1B-203ENST00000368439 INCENPQ9NQS7 918 aa22.55■■□□□ 1.2
CKS1B-203ENST00000368439 ZMYM6O95789 1325 aa22.55■■□□□ 1.2
CKS1B-203ENST00000368439 SLC3A2P08195 630 aaKnown RBP22.54■■□□□ 1.2
CKS1B-203ENST00000368439 FGRP09769 529 aa22.54■■□□□ 1.2
CKS1B-203ENST00000368439 GSPT1P15170 499 aaKnown RBP22.54■■□□□ 1.2
CKS1B-203ENST00000368439 FAM47AQ5JRC9 791 aa22.54■■□□□ 1.2
CKS1B-203ENST00000368439 MORN1Q5T089 497 aa22.54■■□□□ 1.2
CKS1B-203ENST00000368439 CEP95Q96GE4 821 aa22.54■■□□□ 1.2
CKS1B-203ENST00000368439 GOPCQ9HD26 462 aa22.54■■□□□ 1.2
CKS1B-203ENST00000368439 MTMR4Q9NYA4 1195 aa22.54■■□□□ 1.2
CKS1B-203ENST00000368439 ADAMTS5Q9UNA0 930 aa22.54■■□□□ 1.2
CKS1B-203ENST00000368439 PDE4DIPQ5VU43 2346 aa22.54■■□□□ 1.2
CKS1B-203ENST00000368439 INHAP05111 366 aa22.53■■□□□ 1.2
CKS1B-203ENST00000368439 CCL5P13501 91 aa22.53■■□□□ 1.2
CKS1B-203ENST00000368439 UBXN2AP68543 259 aa22.53■■□□□ 1.2
CKS1B-203ENST00000368439 TFAP4Q01664 338 aa22.53■■□□□ 1.2
CKS1B-203ENST00000368439 PLEKHH3Q7Z736 793 aa22.53■■□□□ 1.2
CKS1B-203ENST00000368439 CLIP2Q9UDT6 1046 aa22.53■■□□□ 1.2
CKS1B-203ENST00000368439 FLOT1O75955 427 aa22.52■■□□□ 1.2
CKS1B-203ENST00000368439 CCNA1P78396 465 aa22.52■■□□□ 1.2
CKS1B-203ENST00000368439 TTC22Q5TAA0 569 aa22.52■■□□□ 1.2
CKS1B-203ENST00000368439 SHISA4Q96DD7 197 aa22.52■■□□□ 1.2
CKS1B-203ENST00000368439 ATG4CQ96DT6 458 aa22.52■■□□□ 1.2
CKS1B-203ENST00000368439 NUDT12Q9BQG2 462 aa22.52■■□□□ 1.2
CKS1B-203ENST00000368439 UNC93B1Q9H1C4 597 aa22.52■■□□□ 1.2
CKS1B-203ENST00000368439 BIN2Q9UBW5 565 aaPredicted RBP22.52■■□□□ 1.2
CKS1B-203ENST00000368439 LAMA4Q16363 1823 aa22.52■■□□□ 1.2
CKS1B-203ENST00000368439 F5H6K3 240 aa22.51■■□□□ 1.19
CKS1B-203ENST00000368439 TSPY3P0CV98 308 aa22.51■■□□□ 1.19
CKS1B-203ENST00000368439 TSPY8P0CW00 308 aa22.51■■□□□ 1.19
CKS1B-203ENST00000368439 XRCC5P13010 732 aaKnown RBP22.51■■□□□ 1.19
CKS1B-203ENST00000368439 KLRC3Q07444 240 aa22.51■■□□□ 1.19
CKS1B-203ENST00000368439 FAM83BQ5T0W9 1011 aa22.51■■□□□ 1.19
CKS1B-203ENST00000368439 CWC27Q6UX04 472 aaKnown RBP22.51■■□□□ 1.19
CKS1B-203ENST00000368439 SOCS4Q8WXH5 440 aa22.51■■□□□ 1.19
CKS1B-203ENST00000368439 TRIB2Q92519 343 aa22.51■■□□□ 1.19
CKS1B-203ENST00000368439 MOV10L1Q9BXT6 1211 aaKnown RBP22.51■■□□□ 1.19
CKS1B-203ENST00000368439 NBPF3Q9H094 633 aa22.51■■□□□ 1.19
CKS1B-203ENST00000368439 FBXO28Q9NVF7 368 aa22.51■■□□□ 1.19
CKS1B-203ENST00000368439 SYNPO2Q9UMS6 1093 aa22.51■■□□□ 1.19
CKS1B-203ENST00000368439 ZNF236Q9UL36 1845 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms