RNA–Protein interactions for RNA: ENST00000359440.5

TMC3-201, Transcript of transmembrane channel like 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMC3, Length 4,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-201ENST00000359440 PPP4R3AQ6IN85 833 aa12.58□□□□□ -0.39
TMC3-201ENST00000359440 FMR1NBQ8N0W7 255 aaPredicted RBP12.58□□□□□ -0.39
TMC3-201ENST00000359440 CABS1Q96KC9 395 aa12.58□□□□□ -0.39
TMC3-201ENST00000359440 SELENOSQ9BQE4 189 aa12.58□□□□□ -0.39
TMC3-201ENST00000359440 CAPS2Q9BXY5 557 aa12.58□□□□□ -0.39
TMC3-201ENST00000359440 ROBO2Q9HCK4 1378 aa12.58□□□□□ -0.39
TMC3-201ENST00000359440 DLC1Q96QB1 1528 aa12.58□□□□□ -0.4
TMC3-201ENST00000359440 LAD1O00515 517 aa12.58□□□□□ -0.4
TMC3-201ENST00000359440 CTIFO43310 598 aaKnown RBP12.58□□□□□ -0.4
TMC3-201ENST00000359440 A1BGP04217 495 aa12.58□□□□□ -0.4
TMC3-201ENST00000359440 LDHBP07195 334 aaKnown RBP12.58□□□□□ -0.4
TMC3-201ENST00000359440 TNNI2P48788 182 aa12.58□□□□□ -0.4
TMC3-201ENST00000359440 RPS6KA1Q15418 735 aa12.58□□□□□ -0.4
TMC3-201ENST00000359440 MEX3CQ5U5Q3 659 aaKnown RBP12.58□□□□□ -0.4
TMC3-201ENST00000359440 CABP7Q86V35 215 aa12.58□□□□□ -0.4
TMC3-201ENST00000359440 FNBP4Q8N3X1 1017 aaPredicted RBP12.58□□□□□ -0.4
TMC3-201ENST00000359440 PARD6BQ9BYG5 372 aa12.58□□□□□ -0.4
TMC3-201ENST00000359440 ATP2C2O75185 946 aa12.58□□□□□ -0.4
TMC3-201ENST00000359440 SFMBT2Q5VUG0 894 aa12.58□□□□□ -0.4
TMC3-201ENST00000359440 VPS54Q9P1Q0 977 aa12.58□□□□□ -0.4
TMC3-201ENST00000359440 CHD1O14646 1710 aa12.58□□□□□ -0.4
TMC3-201ENST00000359440 CTNNA2P26232 953 aa12.58□□□□□ -0.4
TMC3-201ENST00000359440 CLIC6Q96NY7 704 aa12.58□□□□□ -0.4
TMC3-201ENST00000359440 MTA3Q9BTC8 594 aa12.58□□□□□ -0.4
TMC3-201ENST00000359440 EFCC1Q9HA90 598 aa12.58□□□□□ -0.4
TMC3-201ENST00000359440 RRP15Q9Y3B9 282 aaKnown RBP12.58□□□□□ -0.4
TMC3-201ENST00000359440 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.58□□□□□ -0.4
TMC3-201ENST00000359440 SETDB1Q15047 1291 aa12.57□□□□□ -0.4
TMC3-201ENST00000359440 SEL1L2Q5TEA6 688 aa12.57□□□□□ -0.4
TMC3-201ENST00000359440 SLC35F6Q8N357 371 aa12.57□□□□□ -0.4
TMC3-201ENST00000359440 SETDB2Q96T68 719 aa12.57□□□□□ -0.4
TMC3-201ENST00000359440 ARPP21Q9UBL0 812 aaPredicted RBP12.57□□□□□ -0.4
TMC3-201ENST00000359440 LRWD1Q9UFC0 647 aa12.57□□□□□ -0.4
TMC3-201ENST00000359440 MAPK8IP1Q9UQF2 711 aa12.57□□□□□ -0.4
TMC3-201ENST00000359440 CTSWP56202 376 aa12.57□□□□□ -0.4
TMC3-201ENST00000359440 PROSER3Q2NL68 480 aa12.57□□□□□ -0.4
TMC3-201ENST00000359440 CCDC170Q8IYT3 715 aa12.57□□□□□ -0.4
TMC3-201ENST00000359440 ZNF579Q8NAF0 562 aaKnown RBP12.57□□□□□ -0.4
TMC3-201ENST00000359440 TRIM7Q9C029 511 aa12.57□□□□□ -0.4
TMC3-201ENST00000359440 MAN1B1Q9UKM7 699 aa12.57□□□□□ -0.4
TMC3-201ENST00000359440 SRPRBQ9Y5M8 271 aaKnown RBP12.57□□□□□ -0.4
TMC3-201ENST00000359440 CASP14P31944 242 aa12.57□□□□□ -0.4
TMC3-201ENST00000359440 TAOK1Q7L7X3 1001 aa12.57□□□□□ -0.4
TMC3-201ENST00000359440 DHTKD1Q96HY7 919 aaPredicted RBP12.57□□□□□ -0.4
TMC3-201ENST00000359440 ZSCAN10Q96SZ4 725 aaPredicted RBP12.57□□□□□ -0.4
TMC3-201ENST00000359440 STK36Q9NRP7 1315 aa12.57□□□□□ -0.4
TMC3-201ENST00000359440 CALUO43852 315 aaPredicted RBP12.57□□□□□ -0.4
TMC3-201ENST00000359440 FAM13AO94988 1023 aa12.57□□□□□ -0.4
TMC3-201ENST00000359440 RPN1P04843 607 aaKnown RBP12.57□□□□□ -0.4
TMC3-201ENST00000359440 IBSPP21815 317 aaPredicted RBP12.57□□□□□ -0.4
TMC3-201ENST00000359440 ATP6V1AP38606 617 aa12.57□□□□□ -0.4
TMC3-201ENST00000359440 ARHGEF25Q86VW2 580 aa12.57□□□□□ -0.4
TMC3-201ENST00000359440 FBF1Q8TES7 1133 aa12.57□□□□□ -0.4
TMC3-201ENST00000359440 RAB17Q9H0T7 212 aa12.57□□□□□ -0.4
TMC3-201ENST00000359440 USP31Q70CQ4 1352 aa12.56□□□□□ -0.4
TMC3-201ENST00000359440 A0A087WUV0 522 aaPredicted RBP12.56□□□□□ -0.4
TMC3-201ENST00000359440 SPDYE3A6NKU9 549 aa12.56□□□□□ -0.4
TMC3-201ENST00000359440 SH2B2O14492 632 aaPredicted RBP12.56□□□□□ -0.4
TMC3-201ENST00000359440 MMP1P03956 469 aa12.56□□□□□ -0.4
TMC3-201ENST00000359440 LTKP29376 864 aa12.56□□□□□ -0.4
TMC3-201ENST00000359440 ALDH3A1P30838 453 aa12.56□□□□□ -0.4
TMC3-201ENST00000359440 RCAN1P53805 252 aa12.56□□□□□ -0.4
TMC3-201ENST00000359440 GNGT1P63211 74 aa12.56□□□□□ -0.4
TMC3-201ENST00000359440 TMED8Q6PL24 325 aaPredicted RBP12.56□□□□□ -0.4
TMC3-201ENST00000359440 BLIDQ8IZY5 108 aa12.56□□□□□ -0.4
TMC3-201ENST00000359440 NT5C3AQ9H0P0 336 aa12.56□□□□□ -0.4
TMC3-201ENST00000359440 PARP2Q9UGN5 583 aa12.56□□□□□ -0.4
TMC3-201ENST00000359440 IKBKGQ9Y6K9 419 aa12.56□□□□□ -0.4
TMC3-201ENST00000359440 ARHGEF40Q8TER5 1519 aa12.56□□□□□ -0.4
TMC3-201ENST00000359440 ARID4AP29374 1257 aaPredicted RBP12.56□□□□□ -0.4
TMC3-201ENST00000359440 KLHL30Q0D2K2 578 aa12.56□□□□□ -0.4
TMC3-201ENST00000359440 SF3B2Q13435 895 aaKnown RBP12.56□□□□□ -0.4
TMC3-201ENST00000359440 RESP18Q5W5W9 173 aa12.56□□□□□ -0.4
TMC3-201ENST00000359440 TPTE2Q6XPS3 522 aa12.56□□□□□ -0.4
TMC3-201ENST00000359440 BCAS4Q8TDM0 211 aa12.56□□□□□ -0.4
TMC3-201ENST00000359440 PRM3Q9NNZ6 103 aa12.56□□□□□ -0.4
TMC3-201ENST00000359440 ABCC12Q96J65 1359 aa12.56□□□□□ -0.4
TMC3-201ENST00000359440 USP32Q8NFA0 1604 aa12.56□□□□□ -0.4
TMC3-201ENST00000359440 FRMPD1Q5SYB0 1578 aa12.56□□□□□ -0.4
TMC3-201ENST00000359440 CRB1P82279 1406 aa12.56□□□□□ -0.4
TMC3-201ENST00000359440 EPHB4P54760 987 aa12.56□□□□□ -0.4
TMC3-201ENST00000359440 SEMA3FQ13275 785 aa12.56□□□□□ -0.4
TMC3-201ENST00000359440 CDCA7Q9BWT1 371 aaPredicted RBP12.56□□□□□ -0.4
TMC3-201ENST00000359440 NKIRAS1Q9NYS0 192 aa12.56□□□□□ -0.4
TMC3-201ENST00000359440 TNKSO95271 1327 aa12.56□□□□□ -0.4
TMC3-201ENST00000359440 C6orf229H3BNL8 230 aa12.55□□□□□ -0.4
TMC3-201ENST00000359440 SCG2P13521 617 aa12.55□□□□□ -0.4
TMC3-201ENST00000359440 HPDP32754 393 aaPredicted RBP12.55□□□□□ -0.4
TMC3-201ENST00000359440 UBE4AQ14139 1066 aa12.55□□□□□ -0.4
TMC3-201ENST00000359440 ZNF827Q17R98 1081 aa12.55□□□□□ -0.4
TMC3-201ENST00000359440 UBL4BQ8N7F7 174 aa12.55□□□□□ -0.4
TMC3-201ENST00000359440 WDR66Q8TBY9 1149 aa12.55□□□□□ -0.4
TMC3-201ENST00000359440 PLIN2Q99541 437 aa12.55□□□□□ -0.4
TMC3-201ENST00000359440 FAM204AQ9H8W3 233 aa12.55□□□□□ -0.4
TMC3-201ENST00000359440 RWDD2AQ9UIY3 292 aa12.55□□□□□ -0.4
TMC3-201ENST00000359440 CCDC6Q16204 474 aa12.55□□□□□ -0.4
TMC3-201ENST00000359440 KMT5BQ4FZB7 885 aa12.55□□□□□ -0.4
TMC3-201ENST00000359440 C2CD5Q86YS7 1000 aa12.55□□□□□ -0.4
TMC3-201ENST00000359440 RGS22Q8NE09 1264 aa12.55□□□□□ -0.4
TMC3-201ENST00000359440 SYMPKQ92797 1274 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms