RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 CHST3Q7LGC8 479 aa12.05□□□□□ -0.48
CAPN3-205ENST00000357568 UBE3BQ7Z3V4 1068 aa12.05□□□□□ -0.48
CAPN3-205ENST00000357568 IGSF22Q8N9C0 903 aa12.05□□□□□ -0.48
CAPN3-205ENST00000357568 CCDC148Q8NFR7 591 aa12.05□□□□□ -0.48
CAPN3-205ENST00000357568 OSBP2Q969R2 916 aa12.05□□□□□ -0.48
CAPN3-205ENST00000357568 A0A0G2JLW4 131 aa12.05□□□□□ -0.48
CAPN3-205ENST00000357568 SH2B2O14492 632 aaPredicted RBP12.05□□□□□ -0.48
CAPN3-205ENST00000357568 RFC4P35249 363 aa12.05□□□□□ -0.48
CAPN3-205ENST00000357568 METAP2P50579 478 aaKnown RBP eCLIP12.05□□□□□ -0.48
CAPN3-205ENST00000357568 RILPL1Q5EBL4 403 aa12.05□□□□□ -0.48
CAPN3-205ENST00000357568 TADA2BQ86TJ2 420 aa12.05□□□□□ -0.48
CAPN3-205ENST00000357568 RPAINQ86UA6 219 aa12.05□□□□□ -0.48
CAPN3-205ENST00000357568 SGMS1Q86VZ5 419 aa12.05□□□□□ -0.48
CAPN3-205ENST00000357568 DZIP3Q86Y13 1208 aaKnown RBP12.05□□□□□ -0.48
CAPN3-205ENST00000357568 PLBD2Q8NHP8 589 aa12.05□□□□□ -0.48
CAPN3-205ENST00000357568 PUF60Q9UHX1 559 aaKnown RBP12.05□□□□□ -0.48
CAPN3-205ENST00000357568 FBXO2Q9UK22 296 aaPredicted RBP12.05□□□□□ -0.48
CAPN3-205ENST00000357568 CEP131Q9UPN4 1083 aa12.05□□□□□ -0.48
CAPN3-205ENST00000357568 EYA2O00167 538 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 FGAP02671 866 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 TTLL5Q6EMB2 1281 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 CLEC4GQ6UXB4 293 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 COL23A1Q86Y22 540 aaPredicted RBP12.04□□□□□ -0.48
CAPN3-205ENST00000357568 CCDC102AQ96A19 550 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 FAM204AQ9H8W3 233 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 GPHNQ9NQX3 736 aaPredicted RBP12.04□□□□□ -0.48
CAPN3-205ENST00000357568 NUP98P52948 1817 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 ZNF213O14771 459 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 ZPR1O75312 459 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 CAMTA2O94983 1202 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 USP14P54578 494 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 NOSTRINQ8IVI9 506 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 SLC35F6Q8N357 371 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 FOXP1Q9H334 677 aaPredicted RBP12.04□□□□□ -0.48
CAPN3-205ENST00000357568 LZTFL1Q9NQ48 299 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 MYO6Q9UM54 1294 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 ZNF652Q9Y2D9 606 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 MYH7P12883 1935 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 PSMD14O00487 310 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 ACTN4O43707 911 aaKnown RBP12.04□□□□□ -0.48
CAPN3-205ENST00000357568 N4BP1O75113 896 aaKnown RBP12.04□□□□□ -0.48
CAPN3-205ENST00000357568 RNF40O75150 1001 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 USP8P40818 1118 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 PIP4K2AP48426 406 aaPredicted RBP12.04□□□□□ -0.48
CAPN3-205ENST00000357568 SPAG1Q07617 926 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 RBL2Q08999 1139 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 MTF1Q14872 753 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 NTRK3Q16288 839 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 HSP90AB3PQ58FF7 597 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 MCTP2Q6DN12 878 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 LMBR1LQ6UX01 489 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 CYP26C1Q6V0L0 522 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 GBP6Q6ZN66 633 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 AMIGO3Q86WK7 504 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 STK11IPQ8N1F8 1099 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 MED15Q96RN5 788 aa12.04□□□□□ -0.48
CAPN3-205ENST00000357568 SRPRBQ9Y5M8 271 aaKnown RBP12.04□□□□□ -0.48
CAPN3-205ENST00000357568 ARHGAP25P42331 645 aa12.03□□□□□ -0.48
CAPN3-205ENST00000357568 PSEN1P49768 467 aa12.03□□□□□ -0.48
CAPN3-205ENST00000357568 RCAN1P53805 252 aa12.03□□□□□ -0.48
CAPN3-205ENST00000357568 CKAP4Q07065 602 aaKnown RBP12.03□□□□□ -0.48
CAPN3-205ENST00000357568 CUL4BQ13620 913 aa12.03□□□□□ -0.48
CAPN3-205ENST00000357568 TRAPPC11Q7Z392 1133 aa12.03□□□□□ -0.48
CAPN3-205ENST00000357568 CLIC6Q96NY7 704 aa12.03□□□□□ -0.48
CAPN3-205ENST00000357568 MYO5AQ9Y4I1 1855 aaKnown RBP12.03□□□□□ -0.48
CAPN3-205ENST00000357568 SYNRGQ9UMZ2 1314 aa12.03□□□□□ -0.48
CAPN3-205ENST00000357568 LRRC10BA6NIK2 292 aa12.03□□□□□ -0.48
CAPN3-205ENST00000357568 LRRIQ3A6PVS8 624 aaPredicted RBP12.03□□□□□ -0.48
CAPN3-205ENST00000357568 SYF2O95926 243 aaKnown RBP12.03□□□□□ -0.48
CAPN3-205ENST00000357568 IARSP41252 1262 aaKnown RBP12.03□□□□□ -0.48
CAPN3-205ENST00000357568 SAFBQ15424 915 aaKnown RBP eCLIP12.03□□□□□ -0.48
CAPN3-205ENST00000357568 APOA5Q6Q788 366 aa12.03□□□□□ -0.48
CAPN3-205ENST00000357568 TTLL7Q6ZT98 887 aa12.03□□□□□ -0.48
CAPN3-205ENST00000357568 EHBP1Q8NDI1 1231 aa12.03□□□□□ -0.48
CAPN3-205ENST00000357568 NEUROD6Q96NK8 337 aa12.03□□□□□ -0.48
CAPN3-205ENST00000357568 TACO1Q9BSH4 297 aaKnown RBP12.03□□□□□ -0.48
CAPN3-205ENST00000357568 MTA3Q9BTC8 594 aa12.03□□□□□ -0.48
CAPN3-205ENST00000357568 SAMSN1Q9NSI8 373 aaKnown RBP12.03□□□□□ -0.48
CAPN3-205ENST00000357568 HPCAL4Q9UM19 191 aa12.03□□□□□ -0.48
CAPN3-205ENST00000357568 ZC3H4Q9UPT8 1303 aaKnown RBP12.02□□□□□ -0.49
CAPN3-205ENST00000357568 CLSTN1O94985 981 aa12.02□□□□□ -0.49
CAPN3-205ENST00000357568 FMNL1O95466 1100 aaPredicted RBP12.02□□□□□ -0.49
CAPN3-205ENST00000357568 LIFRP42702 1097 aa12.02□□□□□ -0.49
CAPN3-205ENST00000357568 CCDC91Q7Z6B0 441 aa12.02□□□□□ -0.49
CAPN3-205ENST00000357568 SH3RF1Q7Z6J0 888 aa12.02□□□□□ -0.49
CAPN3-205ENST00000357568 POTEDQ86YR6 584 aa12.02□□□□□ -0.49
CAPN3-205ENST00000357568 COG1Q8WTW3 980 aa12.02□□□□□ -0.49
CAPN3-205ENST00000357568 GSDMAQ96QA5 445 aa12.02□□□□□ -0.49
CAPN3-205ENST00000357568 IRX2Q9BZI1 471 aaPredicted RBP12.02□□□□□ -0.49
CAPN3-205ENST00000357568 LIMA1Q9UHB6 759 aaKnown RBP12.02□□□□□ -0.49
CAPN3-205ENST00000357568 CDHR2Q9BYE9 1310 aa12.02□□□□□ -0.49
CAPN3-205ENST00000357568 CLGNO14967 610 aa12.02□□□□□ -0.49
CAPN3-205ENST00000357568 APPP05067 770 aa12.02□□□□□ -0.49
CAPN3-205ENST00000357568 SLC9C2Q5TAH2 1124 aa12.02□□□□□ -0.49
CAPN3-205ENST00000357568 FOXR1Q6PIV2 292 aa12.02□□□□□ -0.49
CAPN3-205ENST00000357568 GIGYF2Q6Y7W6 1299 aaKnown RBP12.02□□□□□ -0.49
CAPN3-205ENST00000357568 HAUS4Q9H6D7 363 aa12.02□□□□□ -0.49
CAPN3-205ENST00000357568 GJB4Q9NTQ9 266 aa12.02□□□□□ -0.49
CAPN3-205ENST00000357568 SERTAD1Q9UHV2 236 aa12.02□□□□□ -0.49
CAPN3-205ENST00000357568 ZNF330Q9Y3S2 320 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms