RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 GABPAQ06546 454 aa10.46□□□□□ -0.73
COL4A3BP-202ENST00000357457 TTC6Q86TZ1 520 aa10.46□□□□□ -0.73
COL4A3BP-202ENST00000357457 MIGA1Q8NAN2 632 aa10.46□□□□□ -0.73
COL4A3BP-202ENST00000357457 NPLOC4Q8TAT6 608 aa10.46□□□□□ -0.73
COL4A3BP-202ENST00000357457 SENP6Q9GZR1 1112 aaPredicted RBP10.46□□□□□ -0.73
COL4A3BP-202ENST00000357457 CCDC8Q9H0W5 538 aaPredicted RBP10.46□□□□□ -0.73
COL4A3BP-202ENST00000357457 MUC3AQ02505 3323 aa10.45□□□□□ -0.74
COL4A3BP-202ENST00000357457 SPDYE16A6NNV3 312 aaPredicted RBP10.45□□□□□ -0.74
COL4A3BP-202ENST00000357457 CCER2I3L3R5 266 aa10.45□□□□□ -0.74
COL4A3BP-202ENST00000357457 DNM1LO00429 736 aa10.45□□□□□ -0.74
COL4A3BP-202ENST00000357457 IDH1O75874 414 aaKnown RBP10.45□□□□□ -0.74
COL4A3BP-202ENST00000357457 CD44P16070 742 aaKnown RBP10.45□□□□□ -0.74
COL4A3BP-202ENST00000357457 USP5P45974 858 aa10.45□□□□□ -0.74
COL4A3BP-202ENST00000357457 ATP2B2Q01814 1243 aa10.45□□□□□ -0.74
COL4A3BP-202ENST00000357457 OS9Q13438 667 aaPredicted RBP10.45□□□□□ -0.74
COL4A3BP-202ENST00000357457 RAB3GAP1Q15042 981 aa10.45□□□□□ -0.74
COL4A3BP-202ENST00000357457 ABCB5Q2M3G0 1257 aa10.45□□□□□ -0.74
COL4A3BP-202ENST00000357457 TPRNQ4KMQ1 711 aa10.45□□□□□ -0.74
COL4A3BP-202ENST00000357457 ZKSCAN2Q63HK3 967 aa10.45□□□□□ -0.74
COL4A3BP-202ENST00000357457 MAGEB6Q8N7X4 407 aa10.45□□□□□ -0.74
COL4A3BP-202ENST00000357457 TRPV1Q8NER1 839 aa10.45□□□□□ -0.74
COL4A3BP-202ENST00000357457 FEZ1Q99689 392 aa10.45□□□□□ -0.74
COL4A3BP-202ENST00000357457 RIOK1Q9BRS2 568 aaKnown RBP10.45□□□□□ -0.74
COL4A3BP-202ENST00000357457 ANTXR1Q9H6X2 564 aa10.45□□□□□ -0.74
COL4A3BP-202ENST00000357457 CABP5Q9NP86 173 aa10.45□□□□□ -0.74
COL4A3BP-202ENST00000357457 HOXC10Q9NYD6 342 aa10.45□□□□□ -0.74
COL4A3BP-202ENST00000357457 TLR7Q9NYK1 1049 aaKnown RBP10.45□□□□□ -0.74
COL4A3BP-202ENST00000357457 STRNO43815 780 aa10.44□□□□□ -0.74
COL4A3BP-202ENST00000357457 CYBAP13498 195 aa10.44□□□□□ -0.74
COL4A3BP-202ENST00000357457 CYP2C19P33261 490 aa10.44□□□□□ -0.74
COL4A3BP-202ENST00000357457 MAP3K12Q12852 859 aa10.44□□□□□ -0.74
COL4A3BP-202ENST00000357457 COG2Q14746 738 aa10.44□□□□□ -0.74
COL4A3BP-202ENST00000357457 ZYXQ15942 572 aaKnown RBP10.44□□□□□ -0.74
COL4A3BP-202ENST00000357457 OLFML2BQ68BL8 750 aa10.44□□□□□ -0.74
COL4A3BP-202ENST00000357457 GUCD1Q96NT3 240 aa10.44□□□□□ -0.74
COL4A3BP-202ENST00000357457 RPAP3Q9H6T3 665 aaPredicted RBP10.44□□□□□ -0.74
COL4A3BP-202ENST00000357457 CWC22Q9HCG8 908 aaKnown RBP10.44□□□□□ -0.74
COL4A3BP-202ENST00000357457 NDUFB9Q9Y6M9 179 aa10.44□□□□□ -0.74
COL4A3BP-202ENST00000357457 IVNS1ABPQ9Y6Y0 642 aa10.44□□□□□ -0.74
COL4A3BP-202ENST00000357457 A0A1W2PRG0 241 aa10.43□□□□□ -0.74
COL4A3BP-202ENST00000357457 RTP1P59025 263 aa10.43□□□□□ -0.74
COL4A3BP-202ENST00000357457 SEPT2Q15019 361 aa10.43□□□□□ -0.74
COL4A3BP-202ENST00000357457 SNX17Q15036 470 aa10.43□□□□□ -0.74
COL4A3BP-202ENST00000357457 SLC39A5Q6ZMH5 540 aa10.43□□□□□ -0.74
COL4A3BP-202ENST00000357457 ARRDC4Q8NCT1 418 aa10.43□□□□□ -0.74
COL4A3BP-202ENST00000357457 SHCBP1Q8NEM2 672 aa10.43□□□□□ -0.74
COL4A3BP-202ENST00000357457 LBHD1Q9BQE6 289 aaPredicted RBP10.43□□□□□ -0.74
COL4A3BP-202ENST00000357457 MOV10L1Q9BXT6 1211 aaKnown RBP10.43□□□□□ -0.74
COL4A3BP-202ENST00000357457 C1orf115Q9H7X2 142 aa10.43□□□□□ -0.74
COL4A3BP-202ENST00000357457 LTBP2Q14767 1821 aa10.42□□□□□ -0.74
COL4A3BP-202ENST00000357457 ZNF236Q9UL36 1845 aa10.42□□□□□ -0.74
COL4A3BP-202ENST00000357457 SEPT4O43236 478 aa10.42□□□□□ -0.74
COL4A3BP-202ENST00000357457 COBLO75128 1261 aa10.42□□□□□ -0.74
COL4A3BP-202ENST00000357457 ADORA2AP29274 412 aa10.42□□□□□ -0.74
COL4A3BP-202ENST00000357457 CNGA1P29973 690 aa10.42□□□□□ -0.74
COL4A3BP-202ENST00000357457 ATN1P54259 1190 aaPredicted RBP10.42□□□□□ -0.74
COL4A3BP-202ENST00000357457 WDR78Q5VTH9 848 aa10.42□□□□□ -0.74
COL4A3BP-202ENST00000357457 C1orf53Q5VUE5 145 aa10.42□□□□□ -0.74
COL4A3BP-202ENST00000357457 DPP9Q86TI2 863 aa10.42□□□□□ -0.74
COL4A3BP-202ENST00000357457 ABRAQ8N0Z2 381 aa10.42□□□□□ -0.74
COL4A3BP-202ENST00000357457 MB21D1Q8N884 522 aa10.42□□□□□ -0.74
COL4A3BP-202ENST00000357457 COL25A1Q9BXS0 654 aaPredicted RBP10.42□□□□□ -0.74
COL4A3BP-202ENST00000357457 SPATC1LQ9H0A9 340 aa10.42□□□□□ -0.74
COL4A3BP-202ENST00000357457 MYO9BQ13459 2157 aa10.42□□□□□ -0.74
COL4A3BP-202ENST00000357457 POLR3DP05423 398 aaPredicted RBP10.41□□□□□ -0.74
COL4A3BP-202ENST00000357457 RLBP1P12271 317 aa10.41□□□□□ -0.74
COL4A3BP-202ENST00000357457 ERCC3P19447 782 aa10.41□□□□□ -0.74
COL4A3BP-202ENST00000357457 KIAA1755Q5JYT7 1200 aa10.41□□□□□ -0.74
COL4A3BP-202ENST00000357457 GJC2Q5T442 439 aaPredicted RBP10.41□□□□□ -0.74
COL4A3BP-202ENST00000357457 SIAH1Q8IUQ4 282 aa10.41□□□□□ -0.74
COL4A3BP-202ENST00000357457 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.41□□□□□ -0.74
COL4A3BP-202ENST00000357457 MROH8Q9H579 483 aa10.41□□□□□ -0.74
COL4A3BP-202ENST00000357457 PRKAG2Q9UGJ0 569 aa10.41□□□□□ -0.74
COL4A3BP-202ENST00000357457 PARP14Q460N5 1801 aa10.4□□□□□ -0.74
COL4A3BP-202ENST00000357457 TTC28Q96AY4 2481 aa10.4□□□□□ -0.74
COL4A3BP-202ENST00000357457 MAGEB6P1A0A0J9YX57 407 aa10.4□□□□□ -0.74
COL4A3BP-202ENST00000357457 TCRBV5S4A2TA0A5A2 114 aa10.4□□□□□ -0.74
COL4A3BP-202ENST00000357457 PYGBP11216 843 aa10.4□□□□□ -0.74
COL4A3BP-202ENST00000357457 PDE6AP16499 860 aa10.4□□□□□ -0.74
COL4A3BP-202ENST00000357457 TTF1Q15361 905 aaPredicted RBP10.4□□□□□ -0.74
COL4A3BP-202ENST00000357457 SHHQ15465 462 aa10.4□□□□□ -0.74
COL4A3BP-202ENST00000357457 CEP85Q6P2H3 762 aa10.4□□□□□ -0.74
COL4A3BP-202ENST00000357457 TMEM179Q6ZVK1 233 aa10.4□□□□□ -0.74
COL4A3BP-202ENST00000357457 AACSQ86V21 672 aa10.4□□□□□ -0.74
COL4A3BP-202ENST00000357457 ERC1Q8IUD2 1116 aa10.4□□□□□ -0.74
COL4A3BP-202ENST00000357457 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.4□□□□□ -0.74
COL4A3BP-202ENST00000357457 CRNKL1Q9BZJ0 848 aaKnown RBP10.4□□□□□ -0.74
COL4A3BP-202ENST00000357457 SEMA6BQ9H3T3 888 aa10.4□□□□□ -0.74
COL4A3BP-202ENST00000357457 DCP1AQ9NPI6 582 aaPredicted RBP10.4□□□□□ -0.74
COL4A3BP-202ENST00000357457 MCM9Q9NXL9 1143 aa10.4□□□□□ -0.74
COL4A3BP-202ENST00000357457 SLC5A4Q9NY91 659 aa10.4□□□□□ -0.74
COL4A3BP-202ENST00000357457 NRBP1Q9UHY1 535 aa10.4□□□□□ -0.74
COL4A3BP-202ENST00000357457 ADAMTS5Q9UNA0 930 aa10.4□□□□□ -0.74
COL4A3BP-202ENST00000357457 A0A0G2JMZ2 1700 aa10.4□□□□□ -0.74
COL4A3BP-202ENST00000357457 MYH8P13535 1937 aa10.4□□□□□ -0.74
COL4A3BP-202ENST00000357457 NAV1Q8NEY1 1877 aa10.39□□□□□ -0.75
COL4A3BP-202ENST00000357457 KBTBD13C9JR72 458 aa10.39□□□□□ -0.75
COL4A3BP-202ENST00000357457 LRRC41Q15345 812 aa10.39□□□□□ -0.75
COL4A3BP-202ENST00000357457 PRAMEF19Q5SWL8 479 aa10.39□□□□□ -0.75
COL4A3BP-202ENST00000357457 C9orf50Q5SZB4 431 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms