RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 GRIN1Q05586 938 aa23.35■■□□□ 1.33
CHRNA3-202ENST00000348639 GRM4Q14833 912 aa23.35■■□□□ 1.33
CHRNA3-202ENST00000348639 G3V3G9 751 aa23.34■■□□□ 1.33
CHRNA3-202ENST00000348639 BIN1O00499 593 aa23.34■■□□□ 1.33
CHRNA3-202ENST00000348639 BMP15O95972 392 aa23.34■■□□□ 1.33
CHRNA3-202ENST00000348639 DCAF8Q5TAQ9 597 aa23.34■■□□□ 1.33
CHRNA3-202ENST00000348639 DRC7Q8IY82 874 aa23.34■■□□□ 1.33
CHRNA3-202ENST00000348639 CNNM3Q8NE01 707 aa23.34■■□□□ 1.33
CHRNA3-202ENST00000348639 MRFAP1L1Q96HT8 127 aa23.34■■□□□ 1.33
CHRNA3-202ENST00000348639 KCNF1Q9H3M0 494 aa23.34■■□□□ 1.33
CHRNA3-202ENST00000348639 SPECC1Q5M775 1068 aa23.33■■□□□ 1.33
CHRNA3-202ENST00000348639 METTL16Q86W50 562 aaKnown RBP23.33■■□□□ 1.33
CHRNA3-202ENST00000348639 NAP1L5Q96NT1 182 aaPredicted RBP23.33■■□□□ 1.33
CHRNA3-202ENST00000348639 DAGLAQ9Y4D2 1042 aa23.33■■□□□ 1.33
CHRNA3-202ENST00000348639 MAD2L2Q9UI95 211 aa23.33■■□□□ 1.32
CHRNA3-202ENST00000348639 COL11A2P13942 1736 aaPredicted RBP23.32■■□□□ 1.32
CHRNA3-202ENST00000348639 GOLGB1Q14789 3259 aaKnown RBP23.32■■□□□ 1.32
CHRNA3-202ENST00000348639 NLRP5P59047 1200 aa23.32■■□□□ 1.32
CHRNA3-202ENST00000348639 PNOCQ13519 176 aa23.32■■□□□ 1.32
CHRNA3-202ENST00000348639 C2CD5Q86YS7 1000 aa23.32■■□□□ 1.32
CHRNA3-202ENST00000348639 STAG2Q8N3U4 1231 aa23.32■■□□□ 1.32
CHRNA3-202ENST00000348639 TMEM47Q9BQJ4 181 aa23.32■■□□□ 1.32
CHRNA3-202ENST00000348639 SH3GLB2Q9NR46 395 aa23.32■■□□□ 1.32
CHRNA3-202ENST00000348639 CLIP2Q9UDT6 1046 aa23.32■■□□□ 1.32
CHRNA3-202ENST00000348639 HOOK1Q9UJC3 728 aaKnown RBP23.32■■□□□ 1.32
CHRNA3-202ENST00000348639 EYA3Q99504 573 aa23.32■■□□□ 1.32
CHRNA3-202ENST00000348639 MXD3Q9BW11 206 aa23.32■■□□□ 1.32
CHRNA3-202ENST00000348639 SNED1Q8TER0 1413 aa23.31■■□□□ 1.32
CHRNA3-202ENST00000348639 TNS1Q9HBL0 1735 aaKnown RBP23.31■■□□□ 1.32
CHRNA3-202ENST00000348639 PTGS1P23219 599 aa23.31■■□□□ 1.32
CHRNA3-202ENST00000348639 MDM2Q00987 491 aaPredicted RBP23.31■■□□□ 1.32
CHRNA3-202ENST00000348639 CCDC186Q7Z3E2 898 aa23.31■■□□□ 1.32
CHRNA3-202ENST00000348639 NEDD1Q8NHV4 660 aa23.31■■□□□ 1.32
CHRNA3-202ENST00000348639 CSRNP2Q9H175 543 aa23.31■■□□□ 1.32
CHRNA3-202ENST00000348639 STX8Q9UNK0 236 aa23.31■■□□□ 1.32
CHRNA3-202ENST00000348639 VEGFAP15692 232 aaPredicted RBP23.3■■□□□ 1.32
CHRNA3-202ENST00000348639 CALML3P27482 149 aa23.3■■□□□ 1.32
CHRNA3-202ENST00000348639 CERS5Q8N5B7 392 aa23.3■■□□□ 1.32
CHRNA3-202ENST00000348639 ANO8Q9HCE9 1232 aaPredicted RBP23.3■■□□□ 1.32
CHRNA3-202ENST00000348639 TRAPPC10P48553 1259 aa23.3■■□□□ 1.32
CHRNA3-202ENST00000348639 EZH2Q15910 746 aaKnown RBP23.3■■□□□ 1.32
CHRNA3-202ENST00000348639 TTC38Q5R3I4 469 aa23.3■■□□□ 1.32
CHRNA3-202ENST00000348639 FERMT2Q96AC1 680 aa23.3■■□□□ 1.32
CHRNA3-202ENST00000348639 ZNF219Q9P2Y4 722 aaPredicted RBP23.3■■□□□ 1.32
CHRNA3-202ENST00000348639 TTF2Q9UNY4 1162 aaKnown RBP23.3■■□□□ 1.32
CHRNA3-202ENST00000348639 MTMR7Q9Y216 660 aa23.3■■□□□ 1.32
CHRNA3-202ENST00000348639 SMTNL1A8MU46 457 aa23.29■■□□□ 1.32
CHRNA3-202ENST00000348639 H0YIN7 160 aa23.29■■□□□ 1.32
CHRNA3-202ENST00000348639 POLR2DO15514 142 aaKnown RBP23.29■■□□□ 1.32
CHRNA3-202ENST00000348639 EN1Q05925 392 aaPredicted RBP23.29■■□□□ 1.32
CHRNA3-202ENST00000348639 PICALMQ13492 652 aa23.29■■□□□ 1.32
CHRNA3-202ENST00000348639 NOLC1Q14978 699 aaKnown RBP eCLIP23.29■■□□□ 1.32
CHRNA3-202ENST00000348639 FOXP4Q8IVH2 680 aaPredicted RBP23.29■■□□□ 1.32
CHRNA3-202ENST00000348639 KIAA1524Q8TCG1 905 aa23.29■■□□□ 1.32
CHRNA3-202ENST00000348639 LZTS2Q9BRK4 669 aa23.29■■□□□ 1.32
CHRNA3-202ENST00000348639 NRBP1Q9UHY1 535 aa23.29■■□□□ 1.32
CHRNA3-202ENST00000348639 BAZ2BQ9UIF8 2168 aaKnown RBP23.29■■□□□ 1.32
CHRNA3-202ENST00000348639 PALM3A6NDB9 673 aaPredicted RBP23.28■■□□□ 1.32
CHRNA3-202ENST00000348639 IKBKBO14920 756 aa23.28■■□□□ 1.32
CHRNA3-202ENST00000348639 NOM1Q5C9Z4 860 aaKnown RBP23.28■■□□□ 1.32
CHRNA3-202ENST00000348639 PCDHA5Q9Y5H7 936 aa23.28■■□□□ 1.32
CHRNA3-202ENST00000348639 MYH1P12882 1939 aa23.28■■□□□ 1.32
CHRNA3-202ENST00000348639 FOCADQ5VW36 1801 aa23.28■■□□□ 1.32
CHRNA3-202ENST00000348639 SCNN1DP51172 638 aa23.28■■□□□ 1.32
CHRNA3-202ENST00000348639 SPTLC3Q9NUV7 552 aa23.28■■□□□ 1.32
CHRNA3-202ENST00000348639 WNT7AO00755 349 aa23.27■■□□□ 1.32
CHRNA3-202ENST00000348639 TPM4P67936 248 aa23.27■■□□□ 1.32
CHRNA3-202ENST00000348639 NCAPHQ15003 741 aa23.27■■□□□ 1.32
CHRNA3-202ENST00000348639 POSTNQ15063 836 aa23.27■■□□□ 1.32
CHRNA3-202ENST00000348639 ZNF174Q15697 407 aa23.27■■□□□ 1.32
CHRNA3-202ENST00000348639 SLC15A2Q16348 729 aa23.27■■□□□ 1.32
CHRNA3-202ENST00000348639 ISM2Q6H9L7 571 aa23.27■■□□□ 1.32
CHRNA3-202ENST00000348639 KANK3Q6NY19 840 aa23.27■■□□□ 1.32
CHRNA3-202ENST00000348639 DBNDD1Q9H9R9 158 aa23.27■■□□□ 1.32
CHRNA3-202ENST00000348639 SERTAD1Q9UHV2 236 aa23.27■■□□□ 1.32
CHRNA3-202ENST00000348639 QSER1Q2KHR3 1735 aa23.27■■□□□ 1.32
CHRNA3-202ENST00000348639 NOVP48745 357 aa23.26■■□□□ 1.31
CHRNA3-202ENST00000348639 ATP2C1P98194 919 aaPredicted RBP23.26■■□□□ 1.31
CHRNA3-202ENST00000348639 SLC35G1Q2M3R5 365 aa23.26■■□□□ 1.31
CHRNA3-202ENST00000348639 PIK3AP1Q6ZUJ8 805 aa23.26■■□□□ 1.31
CHRNA3-202ENST00000348639 BLIDQ8IZY5 108 aa23.26■■□□□ 1.31
CHRNA3-202ENST00000348639 PYCARDQ9ULZ3 195 aa23.26■■□□□ 1.31
CHRNA3-202ENST00000348639 CYTH3O43739 400 aa23.26■■□□□ 1.31
CHRNA3-202ENST00000348639 CHRNA5P30532 468 aa23.26■■□□□ 1.31
CHRNA3-202ENST00000348639 NT5DC1Q5TFE4 455 aa23.26■■□□□ 1.31
CHRNA3-202ENST00000348639 USP49Q70CQ1 688 aa23.26■■□□□ 1.31
CHRNA3-202ENST00000348639 PCDHA4Q9UN74 947 aa23.26■■□□□ 1.31
CHRNA3-202ENST00000348639 FOXN1O15353 648 aa23.25■■□□□ 1.31
CHRNA3-202ENST00000348639 ACTN4O43707 911 aaKnown RBP23.25■■□□□ 1.31
CHRNA3-202ENST00000348639 FAM177A1Q8N128 213 aaPredicted RBP23.25■■□□□ 1.31
CHRNA3-202ENST00000348639 GPKOWQ92917 476 aaPredicted RBP eCLIP23.25■■□□□ 1.31
CHRNA3-202ENST00000348639 TOP1P11387 765 aaKnown RBP23.25■■□□□ 1.31
CHRNA3-202ENST00000348639 PTGDRQ13258 359 aa23.25■■□□□ 1.31
CHRNA3-202ENST00000348639 SPZ1Q9BXG8 430 aa23.25■■□□□ 1.31
CHRNA3-202ENST00000348639 KCNQ5Q9NR82 932 aa23.25■■□□□ 1.31
CHRNA3-202ENST00000348639 STK32BQ9NY57 414 aa23.25■■□□□ 1.31
CHRNA3-202ENST00000348639 KLRF2D3W0D1 207 aa23.24■■□□□ 1.31
CHRNA3-202ENST00000348639 SARSP49591 514 aaKnown RBP23.24■■□□□ 1.31
CHRNA3-202ENST00000348639 TERF1P54274 439 aa23.24■■□□□ 1.31
CHRNA3-202ENST00000348639 GABPAQ06546 454 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms