RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 ZNF541Q9H0D2 1346 aa21.6■■□□□ 1.05
PTN-201ENST00000348225 PARP1P09874 1014 aaKnown RBP21.6■■□□□ 1.05
PTN-201ENST00000348225 UBE2HP62256 183 aa21.6■■□□□ 1.05
PTN-201ENST00000348225 V9GY48 417 aaPredicted RBP21.6■■□□□ 1.05
PTN-201ENST00000348225 PALM3A6NDB9 673 aaPredicted RBP21.59■■□□□ 1.05
PTN-201ENST00000348225 FAM196BA6NMK8 535 aa21.59■■□□□ 1.05
PTN-201ENST00000348225 UBE2Q2LH0YL09 131 aa21.59■■□□□ 1.05
PTN-201ENST00000348225 NBPF9Q3BBW0 867 aa21.59■■□□□ 1.05
PTN-201ENST00000348225 TMEM179Q6ZVK1 233 aa21.59■■□□□ 1.05
PTN-201ENST00000348225 SPATA32Q96LK8 384 aa21.59■■□□□ 1.05
PTN-201ENST00000348225 CLIP2Q9UDT6 1046 aa21.59■■□□□ 1.05
PTN-201ENST00000348225 CNOT7Q9UIV1 285 aaKnown RBP21.59■■□□□ 1.05
PTN-201ENST00000348225 MMP1P03956 469 aa21.58■■□□□ 1.05
PTN-201ENST00000348225 TNFAIP1Q13829 316 aa21.58■■□□□ 1.05
PTN-201ENST00000348225 PKN1Q16512 942 aa21.58■■□□□ 1.05
PTN-201ENST00000348225 GPT2Q8TD30 523 aa21.58■■□□□ 1.05
PTN-201ENST00000348225 KANSL2Q9H9L4 492 aa21.58■■□□□ 1.05
PTN-201ENST00000348225 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.58■■□□□ 1.05
PTN-201ENST00000348225 MTMR7Q9Y216 660 aa21.58■■□□□ 1.05
PTN-201ENST00000348225 MYH4Q9Y623 1939 aa21.58■■□□□ 1.05
PTN-201ENST00000348225 SBF1O95248 1867 aa21.58■■□□□ 1.05
PTN-201ENST00000348225 SHTN1A0MZ66 631 aa21.58■■□□□ 1.04
PTN-201ENST00000348225 ABCB5Q2M3G0 1257 aa21.58■■□□□ 1.04
PTN-201ENST00000348225 STAG2Q8N3U4 1231 aa21.58■■□□□ 1.04
PTN-201ENST00000348225 TFIP11Q9UBB9 837 aaKnown RBP21.58■■□□□ 1.04
PTN-201ENST00000348225 RBM26Q5T8P6 1007 aaKnown RBP21.57■■□□□ 1.04
PTN-201ENST00000348225 LRRC47Q8N1G4 583 aaKnown RBP21.57■■□□□ 1.04
PTN-201ENST00000348225 LEO1Q8WVC0 666 aaPredicted RBP21.57■■□□□ 1.04
PTN-201ENST00000348225 CABP5Q9NP86 173 aa21.57■■□□□ 1.04
PTN-201ENST00000348225 KIF28PB7ZC32 967 aa21.56■■□□□ 1.04
PTN-201ENST00000348225 KLRF2D3W0D1 207 aa21.56■■□□□ 1.04
PTN-201ENST00000348225 H7C1D1 291 aa21.56■■□□□ 1.04
PTN-201ENST00000348225 GADD45BO75293 160 aaPredicted RBP21.56■■□□□ 1.04
PTN-201ENST00000348225 SLURP2P0DP57 97 aa21.56■■□□□ 1.04
PTN-201ENST00000348225 SCG2P13521 617 aa21.56■■□□□ 1.04
PTN-201ENST00000348225 U2AF2P26368 475 aaKnown RBP eCLIP21.56■■□□□ 1.04
PTN-201ENST00000348225 SMARCA1P28370 1054 aa21.56■■□□□ 1.04
PTN-201ENST00000348225 GSE1Q14687 1217 aa21.56■■□□□ 1.04
PTN-201ENST00000348225 PFKFB3Q16875 520 aaPredicted RBP21.56■■□□□ 1.04
PTN-201ENST00000348225 ASPRV1Q53RT3 343 aa21.56■■□□□ 1.04
PTN-201ENST00000348225 MYSM1Q5VVJ2 828 aa21.56■■□□□ 1.04
PTN-201ENST00000348225 GPC2Q8N158 579 aa21.56■■□□□ 1.04
PTN-201ENST00000348225 SPZ1Q9BXG8 430 aa21.56■■□□□ 1.04
PTN-201ENST00000348225 GZF1Q9H116 711 aaPredicted RBP21.56■■□□□ 1.04
PTN-201ENST00000348225 NYAP2Q9P242 653 aa21.56■■□□□ 1.04
PTN-201ENST00000348225 TBC1D12O60347 775 aa21.55■■□□□ 1.04
PTN-201ENST00000348225 PDHBP11177 359 aa21.55■■□□□ 1.04
PTN-201ENST00000348225 ATP2B2Q01814 1243 aa21.55■■□□□ 1.04
PTN-201ENST00000348225 KIF4BQ2VIQ3 1234 aa21.55■■□□□ 1.04
PTN-201ENST00000348225 DIS3L2Q8IYB7 885 aaKnown RBP21.55■■□□□ 1.04
PTN-201ENST00000348225 TMEM39BQ9GZU3 492 aa21.55■■□□□ 1.04
PTN-201ENST00000348225 FOXP1Q9H334 677 aaPredicted RBP21.55■■□□□ 1.04
PTN-201ENST00000348225 KCNJ14Q9UNX9 436 aa21.55■■□□□ 1.04
PTN-201ENST00000348225 hCG_1642624A0A1W2PR95 340 aa21.55■■□□□ 1.04
PTN-201ENST00000348225 SNHG28P0DPA3 235 aa21.55■■□□□ 1.04
PTN-201ENST00000348225 TBC1D10BQ4KMP7 808 aaPredicted RBP21.55■■□□□ 1.04
PTN-201ENST00000348225 CLEC10AQ8IUN9 316 aa21.55■■□□□ 1.04
PTN-201ENST00000348225 USP28Q96RU2 1077 aa21.55■■□□□ 1.04
PTN-201ENST00000348225 BRMS1Q9HCU9 246 aa21.55■■□□□ 1.04
PTN-201ENST00000348225 VPS54Q9P1Q0 977 aa21.55■■□□□ 1.04
PTN-201ENST00000348225 GOLGA6L4A6NEF3 574 aa21.54■■□□□ 1.04
PTN-201ENST00000348225 USP17L5A8MUK1 530 aa21.54■■□□□ 1.04
PTN-201ENST00000348225 GDF11O95390 407 aa21.54■■□□□ 1.04
PTN-201ENST00000348225 GOLGA8HP0CJ92 632 aa21.54■■□□□ 1.04
PTN-201ENST00000348225 ICA1Q05084 483 aa21.54■■□□□ 1.04
PTN-201ENST00000348225 CAVIN1Q6NZI2 390 aaKnown RBP21.54■■□□□ 1.04
PTN-201ENST00000348225 USP17L2Q6R6M4 530 aa21.54■■□□□ 1.04
PTN-201ENST00000348225 SAMD7Q7Z3H4 446 aa21.54■■□□□ 1.04
PTN-201ENST00000348225 MKL1Q969V6 931 aa21.54■■□□□ 1.04
PTN-201ENST00000348225 SYAP1Q96A49 352 aaPredicted RBP21.54■■□□□ 1.04
PTN-201ENST00000348225 PHF20Q9BVI0 1012 aa21.54■■□□□ 1.04
PTN-201ENST00000348225 SEPT2Q15019 361 aa21.53■■□□□ 1.04
PTN-201ENST00000348225 NOSTRINQ8IVI9 506 aa21.53■■□□□ 1.04
PTN-201ENST00000348225 SH3GLB2Q9NR46 395 aa21.53■■□□□ 1.04
PTN-201ENST00000348225 RTEL1Q9NZ71 1219 aa21.53■■□□□ 1.04
PTN-201ENST00000348225 EGFRP00533 1210 aa21.52■■□□□ 1.04
PTN-201ENST00000348225 GH2P01242 217 aa21.52■■□□□ 1.04
PTN-201ENST00000348225 EEF2P13639 858 aaKnown RBP21.52■■□□□ 1.04
PTN-201ENST00000348225 KRT2P35908 639 aa21.52■■□□□ 1.04
PTN-201ENST00000348225 CEBPZQ03701 1054 aaKnown RBP21.52■■□□□ 1.04
PTN-201ENST00000348225 RASA3Q14644 834 aa21.52■■□□□ 1.04
PTN-201ENST00000348225 GPATCH4Q5T3I0 446 aaKnown RBP21.52■■□□□ 1.04
PTN-201ENST00000348225 FAM177A1Q8N128 213 aaPredicted RBP21.52■■□□□ 1.04
PTN-201ENST00000348225 POLR3EQ9NVU0 708 aa21.52■■□□□ 1.04
PTN-201ENST00000348225 GPRC5DQ9NZD1 345 aa21.52■■□□□ 1.04
PTN-201ENST00000348225 RCOR1Q9UKL0 485 aa21.52■■□□□ 1.04
PTN-201ENST00000348225 BTBD18B2RXH4 712 aa21.51■■□□□ 1.03
PTN-201ENST00000348225 YEATS4O95619 227 aa21.51■■□□□ 1.03
PTN-201ENST00000348225 PIBF1Q8WXW3 757 aa21.51■■□□□ 1.03
PTN-201ENST00000348225 PGAP2Q9UHJ9 254 aa21.51■■□□□ 1.03
PTN-201ENST00000348225 SYNPO2Q9UMS6 1093 aa21.51■■□□□ 1.03
PTN-201ENST00000348225 CYTH3O43739 400 aa21.51■■□□□ 1.03
PTN-201ENST00000348225 ZNF543Q08ER8 600 aa21.51■■□□□ 1.03
PTN-201ENST00000348225 RASGRP2Q7LDG7 609 aa21.51■■□□□ 1.03
PTN-201ENST00000348225 CCDC148Q8NFR7 591 aa21.51■■□□□ 1.03
PTN-201ENST00000348225 DCAF4Q8WV16 495 aa21.51■■□□□ 1.03
PTN-201ENST00000348225 RRP36Q96EU6 259 aaKnown RBP21.51■■□□□ 1.03
PTN-201ENST00000348225 RNF181Q9P0P0 153 aa21.51■■□□□ 1.03
PTN-201ENST00000348225 SEC63Q9UGP8 760 aaKnown RBP21.51■■□□□ 1.03
PTN-201ENST00000348225 HACL1Q9UJ83 578 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms