RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 TSGA10IPQ3SY00 556 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 CCSAPQ6IQ19 270 aaPredicted RBP3.94□□□□□ -1.78
SYNE1-201ENST00000341594 ACSS2Q9NR19 701 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 ICA1Q05084 483 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 ANKRD24Q8TF21 1146 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 SEPT8Q92599 483 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 CCT4P50991 539 aaKnown RBP3.94□□□□□ -1.78
SYNE1-201ENST00000341594 PTF1AQ7RTS3 328 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 ADGRB2O60241 1585 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 NDC80O14777 642 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 ZNF827Q17R98 1081 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 DACH1Q9UI36 760 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 KIF5BP33176 963 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 PIK3C2AO00443 1686 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 RNF169Q8NCN4 708 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 SH3GL3Q99963 347 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 HACD3Q9P035 362 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 E7ENQ6 273 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 RAD17O75943 681 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 KCNQ5Q9NR82 932 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 NDUFA13Q9P0J0 144 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 ATP5HO75947 161 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 CASP2P42575 452 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 CEP63Q96MT8 703 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 PLXNB2O15031 1838 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 MTM1Q13496 603 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 CHADLQ6NUI6 762 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 SLF1Q9BQI6 1058 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 PIK3R4Q99570 1358 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 CPP00450 1065 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 ETF1P62495 437 aaKnown RBP3.94□□□□□ -1.78
SYNE1-201ENST00000341594 MAP3K11Q16584 847 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 RIC3Q7Z5B4 369 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 DYTNA2CJ06 578 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 GYS1P13807 737 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 MIGA2Q7L4E1 593 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 TARSL2A2RTX5 802 aaKnown RBP3.94□□□□□ -1.78
SYNE1-201ENST00000341594 SRGAP3O43295 1099 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 MAN1A1P33908 653 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 NAA35Q5VZE5 725 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 VDRP11473 427 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 BTKQ06187 659 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 CCDC25Q86WR0 208 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 SLAIN2Q9P270 581 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 PZPP20742 1482 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 CHUKO15111 745 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 IQSEC1Q6DN90 963 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 ZBTB46Q86UZ6 589 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 KIF1BPQ96EK5 621 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 TMX3Q96JJ7 454 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 KIF9Q9HAQ2 790 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 ENC1O14682 589 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 KCNJ14Q9UNX9 436 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 DIP2AQ14689 1571 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 PPFIA4O75335 1185 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 MAGP20916 626 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 RARSP54136 660 aaKnown RBP3.94□□□□□ -1.78
SYNE1-201ENST00000341594 PNMA8AQ86V59 439 aaPredicted RBP3.94□□□□□ -1.78
SYNE1-201ENST00000341594 TNS4Q8IZW8 715 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 AOPEPQ8N6M6 819 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 JRKLQ9Y4A0 524 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 ARHGAP5Q13017 1502 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 GJB2P29033 226 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 PPFIBP1Q86W92 1011 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.94□□□□□ -1.78
SYNE1-201ENST00000341594 RDH13Q8NBN7 331 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 LARSQ9P2J5 1176 aaKnown RBP3.94□□□□□ -1.78
SYNE1-201ENST00000341594 ZNF608Q9ULD9 1512 aaPredicted RBP3.94□□□□□ -1.78
SYNE1-201ENST00000341594 MAP3K15Q6ZN16 1313 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 F8W031 263 aaPredicted RBP3.94□□□□□ -1.78
SYNE1-201ENST00000341594 JAK2O60674 1132 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 RASSF2P50749 326 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 CAPN2P17655 700 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 CASTP20810 708 aaKnown RBP3.94□□□□□ -1.78
SYNE1-201ENST00000341594 AMOTL1Q8IY63 956 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 SENP7Q9BQF6 1050 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 KIAA0556O60303 1618 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 TJP1Q07157 1748 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 SOCS7O14512 581 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 TRIM21P19474 475 aaKnown RBP3.94□□□□□ -1.78
SYNE1-201ENST00000341594 CCT6AP40227 531 aaKnown RBP3.94□□□□□ -1.78
SYNE1-201ENST00000341594 CCDC57Q2TAC2 916 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 MDM1Q8TC05 714 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 SPATA18Q8TC71 538 aa3.94□□□□□ -1.78
SYNE1-201ENST00000341594 CACNA1DQ01668 2161 aa3.93□□□□□ -1.78
SYNE1-201ENST00000341594 ZNF518AQ6AHZ1 1483 aa3.93□□□□□ -1.78
SYNE1-201ENST00000341594 SPAG1Q07617 926 aa3.93□□□□□ -1.78
SYNE1-201ENST00000341594 RNF19AQ9NV58 838 aa3.93□□□□□ -1.78
SYNE1-201ENST00000341594 MAP7D1Q3KQU3 841 aa3.93□□□□□ -1.78
SYNE1-201ENST00000341594 CCDC158Q5M9N0 1113 aa3.93□□□□□ -1.78
SYNE1-201ENST00000341594 TEX9Q8N6V9 391 aa3.93□□□□□ -1.78
SYNE1-201ENST00000341594 BAIAP2L1Q9UHR4 511 aa3.93□□□□□ -1.78
SYNE1-201ENST00000341594 SDSP20132 328 aa3.93□□□□□ -1.78
SYNE1-201ENST00000341594 CCT5P48643 541 aa3.93□□□□□ -1.78
SYNE1-201ENST00000341594 PIP4K2CQ8TBX8 421 aa3.93□□□□□ -1.78
SYNE1-201ENST00000341594 ZBTB40Q9NUA8 1239 aa3.93□□□□□ -1.78
SYNE1-201ENST00000341594 SEMA3EO15041 775 aa3.93□□□□□ -1.78
SYNE1-201ENST00000341594 MRPL12P52815 198 aaKnown RBP3.93□□□□□ -1.78
SYNE1-201ENST00000341594 IFT88Q13099 833 aa3.93□□□□□ -1.78
SYNE1-201ENST00000341594 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms