RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 UPF1Q92900 1129 aaKnown RBP eCLIP19.06■□□□□ 0.64
CDK11B-201ENST00000340677 C9orf78Q9NZ63 289 aaPredicted RBP19.06■□□□□ 0.64
CDK11B-201ENST00000340677 TUBGCP4Q9UGJ1 667 aa19.06■□□□□ 0.64
CDK11B-201ENST00000340677 ZDHHC9Q9Y397 364 aa19.06■□□□□ 0.64
CDK11B-201ENST00000340677 GOLGA6L10A6NI86 522 aa19.05■□□□□ 0.64
CDK11B-201ENST00000340677 SRGAP3O43295 1099 aa19.05■□□□□ 0.64
CDK11B-201ENST00000340677 PPP1R12BO60237 982 aaPredicted RBP19.05■□□□□ 0.64
CDK11B-201ENST00000340677 ONECUT3O60422 494 aaPredicted RBP19.05■□□□□ 0.64
CDK11B-201ENST00000340677 ALOX15P16050 662 aaPredicted RBP19.05■□□□□ 0.64
CDK11B-201ENST00000340677 ENPP1P22413 925 aa19.05■□□□□ 0.64
CDK11B-201ENST00000340677 HDLBPQ00341 1268 aaKnown RBP19.05■□□□□ 0.64
CDK11B-201ENST00000340677 DZIP1Q86YF9 867 aaKnown RBP19.05■□□□□ 0.64
CDK11B-201ENST00000340677 CCDC150Q8NCX0 1101 aa19.05■□□□□ 0.64
CDK11B-201ENST00000340677 CNNM3Q8NE01 707 aa19.05■□□□□ 0.64
CDK11B-201ENST00000340677 DIS3Q9Y2L1 958 aaKnown RBP19.05■□□□□ 0.64
CDK11B-201ENST00000340677 A1BGP04217 495 aa19.05■□□□□ 0.64
CDK11B-201ENST00000340677 HOXD10P28358 340 aa19.05■□□□□ 0.64
CDK11B-201ENST00000340677 CLPPQ16740 277 aaPredicted RBP19.05■□□□□ 0.64
CDK11B-201ENST00000340677 BMP2KLQ5H9B9 411 aa19.05■□□□□ 0.64
CDK11B-201ENST00000340677 DNAJC10Q8IXB1 793 aa19.05■□□□□ 0.64
CDK11B-201ENST00000340677 KLC4Q9NSK0 619 aa19.05■□□□□ 0.64
CDK11B-201ENST00000340677 FAN1Q9Y2M0 1017 aa19.05■□□□□ 0.64
CDK11B-201ENST00000340677 SBF2Q86WG5 1849 aa19.05■□□□□ 0.64
CDK11B-201ENST00000340677 TGFB3P10600 412 aa19.04■□□□□ 0.64
CDK11B-201ENST00000340677 FERP16591 822 aa19.04■□□□□ 0.64
CDK11B-201ENST00000340677 APLP1P51693 650 aa19.04■□□□□ 0.64
CDK11B-201ENST00000340677 GCKRQ14397 625 aa19.04■□□□□ 0.64
CDK11B-201ENST00000340677 TSR1Q2NL82 804 aaKnown RBP19.04■□□□□ 0.64
CDK11B-201ENST00000340677 AFF2P51816 1311 aa19.04■□□□□ 0.64
CDK11B-201ENST00000340677 ERICH2A1L162 156 aa19.04■□□□□ 0.64
CDK11B-201ENST00000340677 SMNDC1O75940 238 aaKnown RBP eCLIP19.04■□□□□ 0.64
CDK11B-201ENST00000340677 CYP19A1P11511 503 aaPredicted RBP19.04■□□□□ 0.64
CDK11B-201ENST00000340677 PDE4BQ07343 736 aa19.04■□□□□ 0.64
CDK11B-201ENST00000340677 OTUD6AQ7L8S5 288 aa19.04■□□□□ 0.64
CDK11B-201ENST00000340677 TRMT1Q9NXH9 659 aaKnown RBP19.04■□□□□ 0.64
CDK11B-201ENST00000340677 RAB11FIP3O75154 756 aa19.03■□□□□ 0.64
CDK11B-201ENST00000340677 GNAT1P11488 350 aa19.03■□□□□ 0.64
CDK11B-201ENST00000340677 CUL3Q13618 768 aa19.03■□□□□ 0.64
CDK11B-201ENST00000340677 KRT72Q14CN4 511 aa19.03■□□□□ 0.64
CDK11B-201ENST00000340677 CWF19L2Q2TBE0 894 aaKnown RBP19.03■□□□□ 0.64
CDK11B-201ENST00000340677 CCDC158Q5M9N0 1113 aa19.03■□□□□ 0.64
CDK11B-201ENST00000340677 ANKK1Q8NFD2 765 aa19.03■□□□□ 0.64
CDK11B-201ENST00000340677 ERMNQ8TAM6 284 aa19.03■□□□□ 0.64
CDK11B-201ENST00000340677 RSRC1Q96IZ7 334 aaKnown RBP19.03■□□□□ 0.64
CDK11B-201ENST00000340677 GJD4Q96KN9 370 aaPredicted RBP19.03■□□□□ 0.64
CDK11B-201ENST00000340677 ARFGAP3Q9NP61 516 aa19.03■□□□□ 0.64
CDK11B-201ENST00000340677 TRPC5Q9UL62 973 aaPredicted RBP19.03■□□□□ 0.64
CDK11B-201ENST00000340677 PNMA6EA0A0J9YXQ4 647 aa19.03■□□□□ 0.64
CDK11B-201ENST00000340677 MYD88Q99836 296 aa19.03■□□□□ 0.64
CDK11B-201ENST00000340677 CAPS2Q9BXY5 557 aa19.03■□□□□ 0.64
CDK11B-201ENST00000340677 LRRC27Q9C0I9 530 aa19.03■□□□□ 0.64
CDK11B-201ENST00000340677 CBFA2T2O43439 604 aa19.02■□□□□ 0.64
CDK11B-201ENST00000340677 CUL4BQ13620 913 aa19.02■□□□□ 0.64
CDK11B-201ENST00000340677 SLC4A8Q2Y0W8 1093 aa19.02■□□□□ 0.64
CDK11B-201ENST00000340677 CATIPQ7Z7H3 387 aa19.02■□□□□ 0.64
CDK11B-201ENST00000340677 CTNNBL1Q8WYA6 563 aaPredicted RBP19.02■□□□□ 0.64
CDK11B-201ENST00000340677 CCDC47Q96A33 483 aaKnown RBP19.02■□□□□ 0.64
CDK11B-201ENST00000340677 SLC4A9Q96Q91 983 aa19.02■□□□□ 0.64
CDK11B-201ENST00000340677 SLC39A3Q9BRY0 314 aa19.02■□□□□ 0.64
CDK11B-201ENST00000340677 BTAF1O14981 1849 aa19.02■□□□□ 0.64
CDK11B-201ENST00000340677 UNCXA6NJT0 531 aa19.02■□□□□ 0.63
CDK11B-201ENST00000340677 APOBRQ0VD83 1088 aa19.02■□□□□ 0.63
CDK11B-201ENST00000340677 RNF168Q8IYW5 571 aaPredicted RBP19.02■□□□□ 0.63
CDK11B-201ENST00000340677 CEP112Q8N8E3 955 aa19.02■□□□□ 0.63
CDK11B-201ENST00000340677 PDE11AQ9HCR9 933 aa19.02■□□□□ 0.63
CDK11B-201ENST00000340677 FSBPO95073 299 aa19.01■□□□□ 0.63
CDK11B-201ENST00000340677 FUT4P22083 530 aa19.01■□□□□ 0.63
CDK11B-201ENST00000340677 PPP1R42Q7Z4L9 355 aa19.01■□□□□ 0.63
CDK11B-201ENST00000340677 NANOGNBQ7Z5D8 188 aa19.01■□□□□ 0.63
CDK11B-201ENST00000340677 ZFAND2BQ8WV99 257 aa19.01■□□□□ 0.63
CDK11B-201ENST00000340677 SYTL4Q96C24 671 aaPredicted RBP19.01■□□□□ 0.63
CDK11B-201ENST00000340677 OSBPL10Q9BXB5 764 aa19.01■□□□□ 0.63
CDK11B-201ENST00000340677 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.01■□□□□ 0.63
CDK11B-201ENST00000340677 NUP98P52948 1817 aa19.01■□□□□ 0.63
CDK11B-201ENST00000340677 EBAG9O00559 213 aa19.01■□□□□ 0.63
CDK11B-201ENST00000340677 PARP1P09874 1014 aaKnown RBP19.01■□□□□ 0.63
CDK11B-201ENST00000340677 IL4RP24394 825 aa19.01■□□□□ 0.63
CDK11B-201ENST00000340677 TRIM28Q13263 835 aaKnown RBP19.01■□□□□ 0.63
CDK11B-201ENST00000340677 WHAMMQ8TF30 809 aa19.01■□□□□ 0.63
CDK11B-201ENST00000340677 CACTINQ8WUQ7 758 aaKnown RBP19.01■□□□□ 0.63
CDK11B-201ENST00000340677 TUBGCP6Q96RT7 1819 aa19■□□□□ 0.63
CDK11B-201ENST00000340677 LSM1O15116 133 aaKnown RBP19■□□□□ 0.63
CDK11B-201ENST00000340677 NDUFB5O43674 189 aa19■□□□□ 0.63
CDK11B-201ENST00000340677 CEP104O60308 925 aa19■□□□□ 0.63
CDK11B-201ENST00000340677 ENOX2Q16206 610 aaKnown RBP19■□□□□ 0.63
CDK11B-201ENST00000340677 RC3H1Q5TC82 1133 aaKnown RBP19■□□□□ 0.63
CDK11B-201ENST00000340677 HPS3Q969F9 1004 aa19■□□□□ 0.63
CDK11B-201ENST00000340677 CFAP69A5D8W1 941 aa19■□□□□ 0.63
CDK11B-201ENST00000340677 MAP2K7O14733 419 aa19■□□□□ 0.63
CDK11B-201ENST00000340677 CCT5P48643 541 aa19■□□□□ 0.63
CDK11B-201ENST00000340677 RCN1Q15293 331 aa19■□□□□ 0.63
CDK11B-201ENST00000340677 LARP7Q4G0J3 582 aaKnown RBP eCLIP19■□□□□ 0.63
CDK11B-201ENST00000340677 BZW1Q7L1Q6 419 aaKnown RBP19■□□□□ 0.63
CDK11B-201ENST00000340677 PEX5LQ8IYB4 626 aa19■□□□□ 0.63
CDK11B-201ENST00000340677 CORO1CQ9ULV4 474 aaPredicted RBP19■□□□□ 0.63
CDK11B-201ENST00000340677 TRIM21P19474 475 aaKnown RBP18.99■□□□□ 0.63
CDK11B-201ENST00000340677 IL6STP40189 918 aaPredicted RBP18.99■□□□□ 0.63
CDK11B-201ENST00000340677 PIP4K2AP48426 406 aaPredicted RBP18.99■□□□□ 0.63
CDK11B-201ENST00000340677 GALNT15Q8N3T1 639 aa18.99■□□□□ 0.63
CDK11B-201ENST00000340677 METTL14Q9HCE5 456 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms