RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 CTAGE15A4D2H0 777 aa16.51■□□□□ 0.23
RET-201ENST00000340058 CTAGE8P0CG41 777 aa16.51■□□□□ 0.23
RET-201ENST00000340058 ARID5BQ14865 1188 aa16.51■□□□□ 0.23
RET-201ENST00000340058 CTAGE6Q86UF2 777 aa16.51■□□□□ 0.23
RET-201ENST00000340058 CTAGE4Q8IX94 777 aa16.51■□□□□ 0.23
RET-201ENST00000340058 RDH13Q8NBN7 331 aa16.51■□□□□ 0.23
RET-201ENST00000340058 NLRC4Q9NPP4 1024 aa16.51■□□□□ 0.23
RET-201ENST00000340058 TRPC5Q9UL62 973 aaPredicted RBP16.51■□□□□ 0.23
RET-201ENST00000340058 ATP2B4P23634 1241 aa16.5■□□□□ 0.23
RET-201ENST00000340058 KCTD1Q719H9 257 aa16.5■□□□□ 0.23
RET-201ENST00000340058 HS2ST1Q7LGA3 356 aa16.5■□□□□ 0.23
RET-201ENST00000340058 XDHP47989 1333 aa16.5■□□□□ 0.23
RET-201ENST00000340058 CTAGE9A4FU28 777 aa16.5■□□□□ 0.23
RET-201ENST00000340058 UBXN2AP68543 259 aa16.5■□□□□ 0.23
RET-201ENST00000340058 COA7Q96BR5 231 aa16.5■□□□□ 0.23
RET-201ENST00000340058 EPSTI1Q96J88 318 aa16.5■□□□□ 0.23
RET-201ENST00000340058 PLEKHA4Q9H4M7 779 aa16.5■□□□□ 0.23
RET-201ENST00000340058 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.5■□□□□ 0.23
RET-201ENST00000340058 NRXN1Q9ULB1 1477 aa16.5■□□□□ 0.23
RET-201ENST00000340058 CYP4A11Q02928 519 aa16.5■□□□□ 0.23
RET-201ENST00000340058 PPP4R3AQ6IN85 833 aa16.5■□□□□ 0.23
RET-201ENST00000340058 KRT25Q7Z3Z0 450 aa16.5■□□□□ 0.23
RET-201ENST00000340058 ARHGEF1Q92888 912 aaKnown RBP16.5■□□□□ 0.23
RET-201ENST00000340058 FERMT2Q96AC1 680 aa16.5■□□□□ 0.23
RET-201ENST00000340058 TMEM110-MUSTN1A8MSY1 372 aa16.49■□□□□ 0.23
RET-201ENST00000340058 GDF11O95390 407 aa16.49■□□□□ 0.23
RET-201ENST00000340058 GJC1P36383 396 aa16.49■□□□□ 0.23
RET-201ENST00000340058 PAF1Q8N7H5 531 aa16.49■□□□□ 0.23
RET-201ENST00000340058 HINFPQ9BQA5 517 aa16.49■□□□□ 0.23
RET-201ENST00000340058 ATP8A2Q9NTI2 1148 aa16.49■□□□□ 0.23
RET-201ENST00000340058 RAD17O75943 681 aa16.49■□□□□ 0.23
RET-201ENST00000340058 ATP1A3P13637 1013 aa16.49■□□□□ 0.23
RET-201ENST00000340058 CDC27P30260 824 aa16.49■□□□□ 0.23
RET-201ENST00000340058 PTPROQ16827 1216 aa16.49■□□□□ 0.23
RET-201ENST00000340058 RABL6Q3YEC7 729 aaPredicted RBP16.49■□□□□ 0.23
RET-201ENST00000340058 FAM107BQ9H098 131 aa16.49■□□□□ 0.23
RET-201ENST00000340058 BCS1LQ9Y276 419 aa16.49■□□□□ 0.23
RET-201ENST00000340058 RIPOR2Q9Y4F9 1068 aa16.49■□□□□ 0.23
RET-201ENST00000340058 BICDL2A1A5D9 508 aa16.49■□□□□ 0.23
RET-201ENST00000340058 CD163L1Q9NR16 1453 aa16.49■□□□□ 0.23
RET-201ENST00000340058 MMP10P09238 476 aa16.48■□□□□ 0.23
RET-201ENST00000340058 POLD1P28340 1107 aa16.48■□□□□ 0.23
RET-201ENST00000340058 ELF2Q15723 593 aa16.48■□□□□ 0.23
RET-201ENST00000340058 STXBP4Q6ZWJ1 553 aa16.48■□□□□ 0.23
RET-201ENST00000340058 MARCH10Q8NA82 808 aaPredicted RBP16.48■□□□□ 0.23
RET-201ENST00000340058 CACTINQ8WUQ7 758 aaKnown RBP16.48■□□□□ 0.23
RET-201ENST00000340058 GBP3Q9H0R5 595 aa16.48■□□□□ 0.23
RET-201ENST00000340058 ZNF408Q9H9D4 720 aa16.48■□□□□ 0.23
RET-201ENST00000340058 ARFGAP3Q9NP61 516 aa16.48■□□□□ 0.23
RET-201ENST00000340058 NCAPD2Q15021 1401 aa16.48■□□□□ 0.23
RET-201ENST00000340058 ALDH1B1P30837 517 aa16.48■□□□□ 0.23
RET-201ENST00000340058 PPP2R5BQ15173 497 aa16.48■□□□□ 0.23
RET-201ENST00000340058 TBC1D10BQ4KMP7 808 aaPredicted RBP16.48■□□□□ 0.23
RET-201ENST00000340058 PRR16Q569H4 304 aa16.48■□□□□ 0.23
RET-201ENST00000340058 IFNAR1P17181 557 aa16.48■□□□□ 0.23
RET-201ENST00000340058 EVCP57679 992 aa16.48■□□□□ 0.23
RET-201ENST00000340058 CNGA4Q8IV77 575 aa16.48■□□□□ 0.23
RET-201ENST00000340058 SLC39A2Q9NP94 309 aa16.48■□□□□ 0.23
RET-201ENST00000340058 SNAP25P60880 206 aa16.47■□□□□ 0.23
RET-201ENST00000340058 CCDC65Q8IXS2 484 aa16.47■□□□□ 0.23
RET-201ENST00000340058 OXER1Q8TDS5 423 aa16.47■□□□□ 0.23
RET-201ENST00000340058 GSTTP1A0A1W2PQM5 241 aa16.47■□□□□ 0.23
RET-201ENST00000340058 CCDC66A2RUB6 948 aa16.47■□□□□ 0.23
RET-201ENST00000340058 KRT13P13646 458 aa16.47■□□□□ 0.23
RET-201ENST00000340058 LMAN1P49257 510 aa16.47■□□□□ 0.23
RET-201ENST00000340058 KRT27Q7Z3Y8 459 aa16.47■□□□□ 0.23
RET-201ENST00000340058 BSDC1Q9NW68 430 aaPredicted RBP16.47■□□□□ 0.23
RET-201ENST00000340058 KRT86O43790 486 aa16.47■□□□□ 0.23
RET-201ENST00000340058 RPS6KA4O75676 772 aa16.47■□□□□ 0.23
RET-201ENST00000340058 CERKLQ49MI3 558 aaPredicted RBP16.47■□□□□ 0.23
RET-201ENST00000340058 DPH6Q7L8W6 267 aa16.47■□□□□ 0.23
RET-201ENST00000340058 SH3RF3Q8TEJ3 882 aaPredicted RBP16.47■□□□□ 0.23
RET-201ENST00000340058 CACNB1Q02641 598 aaPredicted RBP16.47■□□□□ 0.23
RET-201ENST00000340058 PSTPIP2Q9H939 334 aa16.47■□□□□ 0.23
RET-201ENST00000340058 FMNL1O95466 1100 aaPredicted RBP16.46■□□□□ 0.23
RET-201ENST00000340058 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.46■□□□□ 0.23
RET-201ENST00000340058 NLGN1Q8N2Q7 840 aa16.46■□□□□ 0.23
RET-201ENST00000340058 PIGSQ96S52 555 aa16.46■□□□□ 0.23
RET-201ENST00000340058 DNAJC21Q5F1R6 531 aaKnown RBP16.46■□□□□ 0.23
RET-201ENST00000340058 TPH2Q8IWU9 490 aa16.46■□□□□ 0.23
RET-201ENST00000340058 SENP2Q9HC62 589 aa16.46■□□□□ 0.23
RET-201ENST00000340058 ARHGEF10LQ9HCE6 1279 aa16.46■□□□□ 0.23
RET-201ENST00000340058 IQGAP1P46940 1657 aa16.46■□□□□ 0.23
RET-201ENST00000340058 RIMBP3CA6NJZ7 1639 aa16.46■□□□□ 0.23
RET-201ENST00000340058 RIMBP3BA6NNM3 1639 aa16.46■□□□□ 0.23
RET-201ENST00000340058 RIMBP3Q9UFD9 1639 aa16.46■□□□□ 0.23
RET-201ENST00000340058 CCDC169A6NNP5 214 aa16.46■□□□□ 0.22
RET-201ENST00000340058 GSG1L2A8MUP6 293 aa16.46■□□□□ 0.22
RET-201ENST00000340058 PPEF1O14829 653 aaPredicted RBP16.46■□□□□ 0.22
RET-201ENST00000340058 TACC1O75410 805 aa16.46■□□□□ 0.22
RET-201ENST00000340058 ICA1Q05084 483 aa16.46■□□□□ 0.22
RET-201ENST00000340058 IFFO1Q0D2I5 559 aa16.46■□□□□ 0.22
RET-201ENST00000340058 GDAP1L1Q96MZ0 367 aa16.46■□□□□ 0.22
RET-201ENST00000340058 PCDHA1Q9Y5I3 950 aa16.46■□□□□ 0.22
RET-201ENST00000340058 LAMC1P11047 1609 aa16.45■□□□□ 0.22
RET-201ENST00000340058 CEMIPQ8WUJ3 1361 aa16.45■□□□□ 0.22
RET-201ENST00000340058 FRMPD1Q5SYB0 1578 aa16.45■□□□□ 0.22
RET-201ENST00000340058 TMEM232C9JQI7 657 aa16.45■□□□□ 0.22
RET-201ENST00000340058 ITPK1Q13572 414 aa16.45■□□□□ 0.22
RET-201ENST00000340058 BMS1Q14692 1282 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms