RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 DPF2Q92785 391 aa26.48■■□□□ 1.83
CLPTM1-201ENST00000337392 TUBE1Q9UJT0 475 aa26.48■■□□□ 1.83
CLPTM1-201ENST00000337392 FLT1P17948 1338 aa26.48■■□□□ 1.83
CLPTM1-201ENST00000337392 VWA3AA6NCI4 1184 aa26.48■■□□□ 1.83
CLPTM1-201ENST00000337392 PPEF1O14829 653 aaPredicted RBP26.48■■□□□ 1.83
CLPTM1-201ENST00000337392 IL1R1P14778 569 aa26.48■■□□□ 1.83
CLPTM1-201ENST00000337392 MCM7P33993 719 aa26.48■■□□□ 1.83
CLPTM1-201ENST00000337392 RHBDL3P58872 404 aa26.48■■□□□ 1.83
CLPTM1-201ENST00000337392 TRMT44Q8IYL2 757 aaKnown RBP26.48■■□□□ 1.83
CLPTM1-201ENST00000337392 ZNF444Q8N0Y2 327 aaPredicted RBP26.48■■□□□ 1.83
CLPTM1-201ENST00000337392 CERS5Q8N5B7 392 aa26.48■■□□□ 1.83
CLPTM1-201ENST00000337392 TNFRSF25Q93038 417 aa26.48■■□□□ 1.83
CLPTM1-201ENST00000337392 XBP1P17861 261 aa26.47■■□□□ 1.83
CLPTM1-201ENST00000337392 MDM2Q00987 491 aaPredicted RBP26.47■■□□□ 1.83
CLPTM1-201ENST00000337392 MAD2L2Q9UI95 211 aa26.47■■□□□ 1.83
CLPTM1-201ENST00000337392 PCDHAC2Q9Y5I4 1007 aa26.47■■□□□ 1.83
CLPTM1-201ENST00000337392 COBLO75128 1261 aa26.47■■□□□ 1.83
CLPTM1-201ENST00000337392 APBA3O96018 575 aa26.47■■□□□ 1.83
CLPTM1-201ENST00000337392 TMEM47Q9BQJ4 181 aa26.47■■□□□ 1.83
CLPTM1-201ENST00000337392 SRPRBQ9Y5M8 271 aaKnown RBP26.47■■□□□ 1.83
CLPTM1-201ENST00000337392 MAST2Q6P0Q8 1798 aa26.46■■□□□ 1.83
CLPTM1-201ENST00000337392 USP27XA6NNY8 438 aa26.46■■□□□ 1.83
CLPTM1-201ENST00000337392 CALM1P0DP23 149 aa26.46■■□□□ 1.83
CLPTM1-201ENST00000337392 CALM2P0DP24 149 aa26.46■■□□□ 1.83
CLPTM1-201ENST00000337392 CALM3P0DP25 149 aa26.46■■□□□ 1.83
CLPTM1-201ENST00000337392 PCP11498 1178 aaKnown RBP26.46■■□□□ 1.83
CLPTM1-201ENST00000337392 GOLGA8FQ08AF8 430 aa26.46■■□□□ 1.83
CLPTM1-201ENST00000337392 GOLGA8DPQ0D2H9 430 aa26.46■■□□□ 1.83
CLPTM1-201ENST00000337392 SYMPKQ92797 1274 aaKnown RBP26.46■■□□□ 1.83
CLPTM1-201ENST00000337392 C16orf45Q96MC5 204 aaPredicted RBP26.46■■□□□ 1.83
CLPTM1-201ENST00000337392 CDK8P49336 464 aa26.46■■□□□ 1.83
CLPTM1-201ENST00000337392 PTGDRQ13258 359 aa26.46■■□□□ 1.83
CLPTM1-201ENST00000337392 FAM237AA0A1B0GTK4 181 aa26.45■■□□□ 1.83
CLPTM1-201ENST00000337392 RBM6P78332 1123 aaKnown RBP26.45■■□□□ 1.83
CLPTM1-201ENST00000337392 USP17L2Q6R6M4 530 aa26.45■■□□□ 1.83
CLPTM1-201ENST00000337392 HOMER1Q86YM7 354 aa26.45■■□□□ 1.83
CLPTM1-201ENST00000337392 TIGD1Q96MW7 591 aa26.45■■□□□ 1.83
CLPTM1-201ENST00000337392 VAT1LQ9HCJ6 419 aa26.45■■□□□ 1.83
CLPTM1-201ENST00000337392 BBOX1O75936 387 aa26.45■■□□□ 1.82
CLPTM1-201ENST00000337392 PPP4CP60510 307 aa26.45■■□□□ 1.82
CLPTM1-201ENST00000337392 POSTNQ15063 836 aa26.45■■□□□ 1.82
CLPTM1-201ENST00000337392 MRFAP1L1Q96HT8 127 aa26.45■■□□□ 1.82
CLPTM1-201ENST00000337392 SPTLC3Q9NUV7 552 aa26.45■■□□□ 1.82
CLPTM1-201ENST00000337392 DLEC1Q9Y238 1755 aa26.45■■□□□ 1.82
CLPTM1-201ENST00000337392 MMP10P09238 476 aa26.44■■□□□ 1.82
CLPTM1-201ENST00000337392 GSTO1P78417 241 aa26.44■■□□□ 1.82
CLPTM1-201ENST00000337392 PFKFB3Q16875 520 aaPredicted RBP26.44■■□□□ 1.82
CLPTM1-201ENST00000337392 LRRC8AQ8IWT6 810 aa26.44■■□□□ 1.82
CLPTM1-201ENST00000337392 SMYD4Q8IYR2 804 aaPredicted RBP26.44■■□□□ 1.82
CLPTM1-201ENST00000337392 FAM13BQ9NYF5 915 aa26.44■■□□□ 1.82
CLPTM1-201ENST00000337392 DAGLAQ9Y4D2 1042 aa26.44■■□□□ 1.82
CLPTM1-201ENST00000337392 GPR75-ASB3A0A0A6YYF3 556 aa26.44■■□□□ 1.82
CLPTM1-201ENST00000337392 FMR1Q06787 632 aaKnown RBP eCLIP26.44■■□□□ 1.82
CLPTM1-201ENST00000337392 PPP2R5BQ15173 497 aa26.44■■□□□ 1.82
CLPTM1-201ENST00000337392 IL17AQ16552 155 aa26.44■■□□□ 1.82
CLPTM1-201ENST00000337392 TTC38Q5R3I4 469 aa26.44■■□□□ 1.82
CLPTM1-201ENST00000337392 EYA3Q99504 573 aa26.44■■□□□ 1.82
CLPTM1-201ENST00000337392 DDX4Q9NQI0 724 aaKnown RBP26.44■■□□□ 1.82
CLPTM1-201ENST00000337392 FANCLQ9NW38 375 aa26.44■■□□□ 1.82
CLPTM1-201ENST00000337392 MAN1B1Q9UKM7 699 aa26.44■■□□□ 1.82
CLPTM1-201ENST00000337392 ACTN4O43707 911 aaKnown RBP26.43■■□□□ 1.82
CLPTM1-201ENST00000337392 HOXA10P31260 410 aaPredicted RBP26.43■■□□□ 1.82
CLPTM1-201ENST00000337392 TMC6Q7Z403 805 aa26.43■■□□□ 1.82
CLPTM1-201ENST00000337392 HEATR3Q7Z4Q2 680 aa26.43■■□□□ 1.82
CLPTM1-201ENST00000337392 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.43■■□□□ 1.82
CLPTM1-201ENST00000337392 CDK5RAP2Q96SN8 1893 aa26.43■■□□□ 1.82
CLPTM1-201ENST00000337392 RGS22Q8NE09 1264 aa26.42■■□□□ 1.82
CLPTM1-201ENST00000337392 CEP95Q96GE4 821 aa26.42■■□□□ 1.82
CLPTM1-201ENST00000337392 DBNDD1Q9H9R9 158 aa26.42■■□□□ 1.82
CLPTM1-201ENST00000337392 CACNB3P54284 484 aa26.42■■□□□ 1.82
CLPTM1-201ENST00000337392 SNED1Q8TER0 1413 aa26.41■■□□□ 1.82
CLPTM1-201ENST00000337392 LDHCP07864 332 aa26.41■■□□□ 1.82
CLPTM1-201ENST00000337392 SRGNP10124 158 aa26.41■■□□□ 1.82
CLPTM1-201ENST00000337392 WWC2Q6AWC2 1192 aa26.41■■□□□ 1.82
CLPTM1-201ENST00000337392 C15orf52Q6ZUT6 534 aaKnown RBP26.41■■□□□ 1.82
CLPTM1-201ENST00000337392 UBA5Q9GZZ9 404 aa26.41■■□□□ 1.82
CLPTM1-201ENST00000337392 TRMT1Q9NXH9 659 aaKnown RBP26.41■■□□□ 1.82
CLPTM1-201ENST00000337392 NAV1Q8NEY1 1877 aa26.41■■□□□ 1.82
CLPTM1-201ENST00000337392 TMEM232C9JQI7 657 aa26.41■■□□□ 1.82
CLPTM1-201ENST00000337392 AMOTL1Q8IY63 956 aa26.41■■□□□ 1.82
CLPTM1-201ENST00000337392 MED15Q96RN5 788 aa26.41■■□□□ 1.82
CLPTM1-201ENST00000337392 DGKHQ86XP1 1220 aa26.4■■□□□ 1.82
CLPTM1-201ENST00000337392 ZNF622Q969S3 477 aaKnown RBP eCLIP26.4■■□□□ 1.822e-7■■■□□ 18
CLPTM1-201ENST00000337392 FANCCQ00597 558 aa26.4■■□□□ 1.82
CLPTM1-201ENST00000337392 BRMS1Q9HCU9 246 aa26.4■■□□□ 1.82
CLPTM1-201ENST00000337392 ANKRD31Q8N7Z5 1873 aa26.4■■□□□ 1.82
CLPTM1-201ENST00000337392 SHROOM1Q2M3G4 852 aaPredicted RBP26.39■■□□□ 1.82
CLPTM1-201ENST00000337392 CRAMP1Q96RY5 1269 aa26.39■■□□□ 1.82
CLPTM1-201ENST00000337392 BLZF1Q9H2G9 400 aa26.39■■□□□ 1.82
CLPTM1-201ENST00000337392 TTF2Q9UNY4 1162 aaKnown RBP26.39■■□□□ 1.82
CLPTM1-201ENST00000337392 FRMPD2Q68DX3 1309 aaPredicted RBP26.39■■□□□ 1.82
CLPTM1-201ENST00000337392 DDX60LQ5H9U9 1706 aaKnown RBP26.39■■□□□ 1.82
CLPTM1-201ENST00000337392 FAM196BA6NMK8 535 aa26.39■■□□□ 1.81
CLPTM1-201ENST00000337392 KLHL10Q6JEL2 608 aa26.39■■□□□ 1.81
CLPTM1-201ENST00000337392 PP2D1A8MPX8 630 aa26.38■■□□□ 1.81
CLPTM1-201ENST00000337392 CDC25BP30305 580 aa26.38■■□□□ 1.81
CLPTM1-201ENST00000337392 KIF5BP33176 963 aa26.38■■□□□ 1.81
CLPTM1-201ENST00000337392 LRRC47Q8N1G4 583 aaKnown RBP26.38■■□□□ 1.81
CLPTM1-201ENST00000337392 CEP131Q9UPN4 1083 aa26.38■■□□□ 1.81
CLPTM1-201ENST00000337392 ATP6V0A2Q9Y487 856 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms