RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 NYAP2Q9P242 653 aa23.44■■□□□ 1.34
VEGFB-201ENST00000309422 U3KPZ7 1027 aaPredicted RBP23.44■■□□□ 1.34
VEGFB-201ENST00000309422 SGSM2O43147 1006 aa23.43■■□□□ 1.34
VEGFB-201ENST00000309422 FMNL1O95466 1100 aaPredicted RBP23.43■■□□□ 1.34
VEGFB-201ENST00000309422 HOXD10P28358 340 aa23.43■■□□□ 1.34
VEGFB-201ENST00000309422 LACTBP83111 547 aaPredicted RBP23.43■■□□□ 1.34
VEGFB-201ENST00000309422 TRDNQ13061 729 aa23.43■■□□□ 1.34
VEGFB-201ENST00000309422 FAM110CQ1W6H9 321 aa23.43■■□□□ 1.34
VEGFB-201ENST00000309422 ANKRD13CQ8N6S4 541 aa23.43■■□□□ 1.34
VEGFB-201ENST00000309422 STAG1Q8WVM7 1258 aa23.43■■□□□ 1.34
VEGFB-201ENST00000309422 ISY1Q9ULR0 285 aaKnown RBP23.43■■□□□ 1.34
VEGFB-201ENST00000309422 SYNPO2Q9UMS6 1093 aa23.43■■□□□ 1.34
VEGFB-201ENST00000309422 STX8Q9UNK0 236 aa23.43■■□□□ 1.34
VEGFB-201ENST00000309422 HERVK_113P62684 666 aa23.42■■□□□ 1.34
VEGFB-201ENST00000309422 CEP95Q96GE4 821 aa23.42■■□□□ 1.34
VEGFB-201ENST00000309422 MCOLN1Q9GZU1 580 aa23.42■■□□□ 1.34
VEGFB-201ENST00000309422 CNNM2Q9H8M5 875 aa23.42■■□□□ 1.34
VEGFB-201ENST00000309422 CLIP2Q9UDT6 1046 aa23.42■■□□□ 1.34
VEGFB-201ENST00000309422 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.42■■□□□ 1.34
VEGFB-201ENST00000309422 ADGRA2Q96PE1 1338 aa23.42■■□□□ 1.34
VEGFB-201ENST00000309422 PTPRFP10586 1907 aa23.42■■□□□ 1.34
VEGFB-201ENST00000309422 A0A1W2PRG0 241 aa23.41■■□□□ 1.34
VEGFB-201ENST00000309422 SPICE1Q8N0Z3 855 aa23.41■■□□□ 1.34
VEGFB-201ENST00000309422 MTMR4Q9NYA4 1195 aa23.41■■□□□ 1.34
VEGFB-201ENST00000309422 BCRP11274 1271 aa23.4■■□□□ 1.34
VEGFB-201ENST00000309422 CCNA1P78396 465 aa23.4■■□□□ 1.34
VEGFB-201ENST00000309422 SKAP1Q86WV1 359 aa23.4■■□□□ 1.34
VEGFB-201ENST00000309422 IQCA1Q86XH1 822 aa23.4■■□□□ 1.34
VEGFB-201ENST00000309422 PAGR1Q9BTK6 254 aa23.4■■□□□ 1.34
VEGFB-201ENST00000309422 KRT23Q9C075 422 aa23.4■■□□□ 1.34
VEGFB-201ENST00000309422 FLOT1O75955 427 aa23.4■■□□□ 1.34
VEGFB-201ENST00000309422 PSMC4P43686 418 aa23.4■■□□□ 1.34
VEGFB-201ENST00000309422 PRMT2P55345 433 aa23.4■■□□□ 1.34
VEGFB-201ENST00000309422 CCDC178Q5BJE1 867 aa23.4■■□□□ 1.34
VEGFB-201ENST00000309422 FBXO46Q6PJ61 603 aaPredicted RBP23.4■■□□□ 1.34
VEGFB-201ENST00000309422 CATSPERGQ6ZRH7 1159 aa23.4■■□□□ 1.34
VEGFB-201ENST00000309422 OTOP1Q7RTM1 612 aa23.4■■□□□ 1.34
VEGFB-201ENST00000309422 ANO2Q9NQ90 1003 aa23.4■■□□□ 1.34
VEGFB-201ENST00000309422 HOXC10Q9NYD6 342 aa23.4■■□□□ 1.34
VEGFB-201ENST00000309422 TNPO2O14787 897 aaKnown RBP23.39■■□□□ 1.33
VEGFB-201ENST00000309422 SAMD1Q6SPF0 538 aaPredicted RBP23.39■■□□□ 1.33
VEGFB-201ENST00000309422 RALYLQ86SE5 291 aaKnown RBP23.39■■□□□ 1.33
VEGFB-201ENST00000309422 TBC1D10CQ8IV04 446 aa23.39■■□□□ 1.33
VEGFB-201ENST00000309422 LRRC47Q8N1G4 583 aaKnown RBP23.39■■□□□ 1.33
VEGFB-201ENST00000309422 GPRC5AQ8NFJ5 357 aa23.39■■□□□ 1.33
VEGFB-201ENST00000309422 COA7Q96BR5 231 aa23.39■■□□□ 1.33
VEGFB-201ENST00000309422 P2RX7Q99572 595 aaKnown RBP23.39■■□□□ 1.33
VEGFB-201ENST00000309422 ESYT1Q9BSJ8 1104 aa23.39■■□□□ 1.33
VEGFB-201ENST00000309422 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.39■■□□□ 1.33
VEGFB-201ENST00000309422 CTDP1Q9Y5B0 961 aaPredicted RBP23.39■■□□□ 1.33
VEGFB-201ENST00000309422 IGKV6D-41A0A0C4DH26 115 aa23.38■■□□□ 1.33
VEGFB-201ENST00000309422 ECM2O94769 699 aaPredicted RBP23.38■■□□□ 1.33
VEGFB-201ENST00000309422 FGRP09769 529 aa23.38■■□□□ 1.33
VEGFB-201ENST00000309422 COG2Q14746 738 aa23.38■■□□□ 1.33
VEGFB-201ENST00000309422 CASP8AP2Q9UKL3 1982 aa23.37■■□□□ 1.33
VEGFB-201ENST00000309422 MYPNQ86TC9 1320 aa23.37■■□□□ 1.33
VEGFB-201ENST00000309422 MB21D1Q8N884 522 aa23.37■■□□□ 1.33
VEGFB-201ENST00000309422 UBAC1Q9BSL1 405 aa23.37■■□□□ 1.33
VEGFB-201ENST00000309422 RABGAP1Q9Y3P9 1069 aa23.37■■□□□ 1.33
VEGFB-201ENST00000309422 F5H6K3 240 aa23.36■■□□□ 1.33
VEGFB-201ENST00000309422 KLRC3Q07444 240 aa23.36■■□□□ 1.33
VEGFB-201ENST00000309422 IKQ13123 557 aaPredicted RBP23.36■■□□□ 1.33
VEGFB-201ENST00000309422 RNF20Q5VTR2 975 aa23.36■■□□□ 1.33
VEGFB-201ENST00000309422 GMCL1P1Q8NEA9 526 aa23.36■■□□□ 1.33
VEGFB-201ENST00000309422 IL25Q9H293 177 aa23.36■■□□□ 1.33
VEGFB-201ENST00000309422 MORF4L1Q9UBU8 362 aa23.36■■□□□ 1.33
VEGFB-201ENST00000309422 NEDD4P46934 1319 aa23.35■■□□□ 1.33
VEGFB-201ENST00000309422 NDUFB10O96000 172 aa23.35■■□□□ 1.33
VEGFB-201ENST00000309422 SIAH1Q8IUQ4 282 aa23.35■■□□□ 1.33
VEGFB-201ENST00000309422 RAET1EQ8TD07 263 aa23.35■■□□□ 1.33
VEGFB-201ENST00000309422 MKL1Q969V6 931 aa23.35■■□□□ 1.33
VEGFB-201ENST00000309422 MAPK4P31152 587 aa23.34■■□□□ 1.33
VEGFB-201ENST00000309422 ERVK-9P63128 1117 aa23.34■■□□□ 1.33
VEGFB-201ENST00000309422 ERVK-24P63145 666 aa23.34■■□□□ 1.33
VEGFB-201ENST00000309422 SART3Q15020 963 aaKnown RBP23.34■■□□□ 1.33
VEGFB-201ENST00000309422 FAM83BQ5T0W9 1011 aa23.34■■□□□ 1.33
VEGFB-201ENST00000309422 SLFN13Q68D06 897 aa23.34■■□□□ 1.33
VEGFB-201ENST00000309422 ABHD8Q96I13 439 aa23.34■■□□□ 1.33
VEGFB-201ENST00000309422 INCENPQ9NQS7 918 aa23.34■■□□□ 1.33
VEGFB-201ENST00000309422 TCP11L1Q9NUJ3 509 aa23.34■■□□□ 1.33
VEGFB-201ENST00000309422 RBM8AQ9Y5S9 174 aaKnown RBP23.34■■□□□ 1.33
VEGFB-201ENST00000309422 ERICH2A1L162 156 aa23.33■■□□□ 1.33
VEGFB-201ENST00000309422 SPDYE16A6NNV3 312 aaPredicted RBP23.33■■□□□ 1.33
VEGFB-201ENST00000309422 KDM4AO75164 1064 aa23.33■■□□□ 1.33
VEGFB-201ENST00000309422 TOP1P11387 765 aaKnown RBP23.33■■□□□ 1.33
VEGFB-201ENST00000309422 SLC1A4P43007 532 aa23.33■■□□□ 1.33
VEGFB-201ENST00000309422 PTH1RQ03431 593 aa23.33■■□□□ 1.33
VEGFB-201ENST00000309422 WDR78Q5VTH9 848 aa23.33■■□□□ 1.33
VEGFB-201ENST00000309422 LBX2Q6XYB7 198 aa23.33■■□□□ 1.33
VEGFB-201ENST00000309422 ARHGAP39Q9C0H5 1083 aa23.33■■□□□ 1.33
VEGFB-201ENST00000309422 PTPN22Q9Y2R2 807 aa23.33■■□□□ 1.33
VEGFB-201ENST00000309422 LAMA4Q16363 1823 aa23.32■■□□□ 1.32
VEGFB-201ENST00000309422 B4E1Z4 1266 aa23.32■■□□□ 1.32
VEGFB-201ENST00000309422 BMP3P12645 472 aa23.32■■□□□ 1.32
VEGFB-201ENST00000309422 CCDC96Q2M329 555 aa23.32■■□□□ 1.32
VEGFB-201ENST00000309422 NBPF11Q86T75 865 aa23.32■■□□□ 1.32
VEGFB-201ENST00000309422 MAP4K1Q92918 833 aa23.32■■□□□ 1.32
VEGFB-201ENST00000309422 TRIM47Q96LD4 638 aa23.32■■□□□ 1.32
VEGFB-201ENST00000309422 TTC14Q96N46 770 aa23.32■■□□□ 1.32
VEGFB-201ENST00000309422 SLF1Q9BQI6 1058 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms