RNA–Protein interactions for RNA: ENST00000308298.11

SSH3-202, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-202ENST00000308298 ELOA2Q8IYF1 753 aaPredicted RBP23.09■■□□□ 1.29
SSH3-202ENST00000308298 CNNM3Q8NE01 707 aa23.09■■□□□ 1.29
SSH3-202ENST00000308298 ZC3H12CQ9C0D7 883 aaKnown RBP23.09■■□□□ 1.29
SSH3-202ENST00000308298 KCNF1Q9H3M0 494 aa23.09■■□□□ 1.29
SSH3-202ENST00000308298 DAGLAQ9Y4D2 1042 aa23.09■■□□□ 1.29
SSH3-202ENST00000308298 TNS1Q9HBL0 1735 aaKnown RBP23.09■■□□□ 1.29
SSH3-202ENST00000308298 BMP15O95972 392 aa23.08■■□□□ 1.29
SSH3-202ENST00000308298 MRFAP1L1Q96HT8 127 aa23.08■■□□□ 1.29
SSH3-202ENST00000308298 NLRP5P59047 1200 aa23.08■■□□□ 1.28
SSH3-202ENST00000308298 METTL16Q86W50 562 aaKnown RBP23.08■■□□□ 1.28
SSH3-202ENST00000308298 RGPD3A6NKT7 1758 aaPredicted RBP23.07■■□□□ 1.28
SSH3-202ENST00000308298 RGPD4Q7Z3J3 1758 aa23.07■■□□□ 1.28
SSH3-202ENST00000308298 RXRBP28702 533 aa23.07■■□□□ 1.28
SSH3-202ENST00000308298 PNOCQ13519 176 aa23.07■■□□□ 1.28
SSH3-202ENST00000308298 DPP8Q6V1X1 898 aaPredicted RBP23.07■■□□□ 1.28
SSH3-202ENST00000308298 MASTLQ96GX5 879 aa23.07■■□□□ 1.28
SSH3-202ENST00000308298 EYA3Q99504 573 aa23.07■■□□□ 1.28
SSH3-202ENST00000308298 TMEM47Q9BQJ4 181 aa23.07■■□□□ 1.28
SSH3-202ENST00000308298 CLIP2Q9UDT6 1046 aa23.07■■□□□ 1.28
SSH3-202ENST00000308298 MAD2L2Q9UI95 211 aa23.07■■□□□ 1.28
SSH3-202ENST00000308298 PTGS1P23219 599 aa23.06■■□□□ 1.28
SSH3-202ENST00000308298 OLFM4Q6UX06 510 aa23.06■■□□□ 1.28
SSH3-202ENST00000308298 STAG2Q8N3U4 1231 aa23.06■■□□□ 1.28
SSH3-202ENST00000308298 HOOK1Q9UJC3 728 aaKnown RBP23.06■■□□□ 1.28
SSH3-202ENST00000308298 STX8Q9UNK0 236 aa23.06■■□□□ 1.28
SSH3-202ENST00000308298 MYH8P13535 1937 aa23.06■■□□□ 1.28
SSH3-202ENST00000308298 NEDD1Q8NHV4 660 aa23.06■■□□□ 1.28
SSH3-202ENST00000308298 TMX4Q9H1E5 349 aaPredicted RBP23.06■■□□□ 1.28
SSH3-202ENST00000308298 SH3GLB2Q9NR46 395 aa23.06■■□□□ 1.28
SSH3-202ENST00000308298 CALML3P27482 149 aa23.05■■□□□ 1.28
SSH3-202ENST00000308298 TTC38Q5R3I4 469 aa23.05■■□□□ 1.28
SSH3-202ENST00000308298 CCDC186Q7Z3E2 898 aa23.05■■□□□ 1.28
SSH3-202ENST00000308298 CSRNP2Q9H175 543 aa23.05■■□□□ 1.28
SSH3-202ENST00000308298 VEGFAP15692 232 aaPredicted RBP23.04■■□□□ 1.28
SSH3-202ENST00000308298 NOM1Q5C9Z4 860 aaKnown RBP23.04■■□□□ 1.28
SSH3-202ENST00000308298 SMTNL1A8MU46 457 aa23.04■■□□□ 1.28
SSH3-202ENST00000308298 POLR2DO15514 142 aaKnown RBP23.04■■□□□ 1.28
SSH3-202ENST00000308298 CERS5Q8N5B7 392 aa23.04■■□□□ 1.28
SSH3-202ENST00000308298 FERMT2Q96AC1 680 aa23.04■■□□□ 1.28
SSH3-202ENST00000308298 TRAPPC10P48553 1259 aa23.03■■□□□ 1.28
SSH3-202ENST00000308298 MDM2Q00987 491 aaPredicted RBP23.03■■□□□ 1.28
SSH3-202ENST00000308298 NRBP1Q9UHY1 535 aa23.03■■□□□ 1.28
SSH3-202ENST00000308298 PALM3A6NDB9 673 aaPredicted RBP23.03■■□□□ 1.28
SSH3-202ENST00000308298 WNT7AO00755 349 aa23.03■■□□□ 1.28
SSH3-202ENST00000308298 TPM4P67936 248 aa23.03■■□□□ 1.28
SSH3-202ENST00000308298 NOLC1Q14978 699 aaKnown RBP eCLIP23.03■■□□□ 1.28
SSH3-202ENST00000308298 DOK7Q18PE1 504 aa23.03■■□□□ 1.28
SSH3-202ENST00000308298 ISM2Q6H9L7 571 aa23.03■■□□□ 1.28
SSH3-202ENST00000308298 LZTS2Q9BRK4 669 aa23.03■■□□□ 1.28
SSH3-202ENST00000308298 ADAMTSL1Q8N6G6 1762 aa23.03■■□□□ 1.28
SSH3-202ENST00000308298 F8W031 263 aaPredicted RBP23.02■■□□□ 1.28
SSH3-202ENST00000308298 IKBKBO14920 756 aa23.02■■□□□ 1.28
SSH3-202ENST00000308298 MSL1Q68DK7 614 aa23.02■■□□□ 1.28
SSH3-202ENST00000308298 PIK3AP1Q6ZUJ8 805 aa23.02■■□□□ 1.28
SSH3-202ENST00000308298 FOXP4Q8IVH2 680 aaPredicted RBP23.02■■□□□ 1.28
SSH3-202ENST00000308298 KIAA1524Q8TCG1 905 aa23.02■■□□□ 1.28
SSH3-202ENST00000308298 SERTAD1Q9UHV2 236 aa23.02■■□□□ 1.28
SSH3-202ENST00000308298 PYCARDQ9ULZ3 195 aa23.02■■□□□ 1.28
SSH3-202ENST00000308298 TTF2Q9UNY4 1162 aaKnown RBP23.02■■□□□ 1.28
SSH3-202ENST00000308298 PCDHA5Q9Y5H7 936 aa23.02■■□□□ 1.28
SSH3-202ENST00000308298 POSTNQ15063 836 aa23.01■■□□□ 1.27
SSH3-202ENST00000308298 ZNF174Q15697 407 aa23.01■■□□□ 1.27
SSH3-202ENST00000308298 KANK3Q6NY19 840 aa23.01■■□□□ 1.27
SSH3-202ENST00000308298 BLIDQ8IZY5 108 aa23.01■■□□□ 1.27
SSH3-202ENST00000308298 GPKOWQ92917 476 aaPredicted RBP eCLIP23.01■■□□□ 1.27
SSH3-202ENST00000308298 SPTLC3Q9NUV7 552 aa23.01■■□□□ 1.27
SSH3-202ENST00000308298 G3V3G9 751 aa23.01■■□□□ 1.27
SSH3-202ENST00000308298 FOXN1O15353 648 aa23.01■■□□□ 1.27
SSH3-202ENST00000308298 ATP2C1P98194 919 aaPredicted RBP23.01■■□□□ 1.27
SSH3-202ENST00000308298 NCAPHQ15003 741 aa23.01■■□□□ 1.27
SSH3-202ENST00000308298 SLC35G1Q2M3R5 365 aa23.01■■□□□ 1.27
SSH3-202ENST00000308298 DCAF8Q5TAQ9 597 aa23.01■■□□□ 1.27
SSH3-202ENST00000308298 USP49Q70CQ1 688 aa23.01■■□□□ 1.27
SSH3-202ENST00000308298 ZNF622Q969S3 477 aaKnown RBP eCLIP23.01■■□□□ 1.27
SSH3-202ENST00000308298 PCDHA4Q9UN74 947 aa23.01■■□□□ 1.27
SSH3-202ENST00000308298 MTMR7Q9Y216 660 aa23.01■■□□□ 1.27
SSH3-202ENST00000308298 ACTN4O43707 911 aaKnown RBP23■■□□□ 1.27
SSH3-202ENST00000308298 CYTH3O43739 400 aa23■■□□□ 1.27
SSH3-202ENST00000308298 PICALMQ13492 652 aa23■■□□□ 1.27
SSH3-202ENST00000308298 PLIN4Q96Q06 1357 aa23■■□□□ 1.27
SSH3-202ENST00000308298 TOP1P11387 765 aaKnown RBP22.99■■□□□ 1.27
SSH3-202ENST00000308298 NOVP48745 357 aa22.99■■□□□ 1.27
SSH3-202ENST00000308298 PDILTQ8N807 584 aa22.99■■□□□ 1.27
SSH3-202ENST00000308298 CCDC148Q8NFR7 591 aa22.99■■□□□ 1.27
SSH3-202ENST00000308298 CEP95Q96GE4 821 aa22.99■■□□□ 1.27
SSH3-202ENST00000308298 ADAMTS3O15072 1205 aa22.99■■□□□ 1.27
SSH3-202ENST00000308298 PTGDRQ13258 359 aa22.99■■□□□ 1.27
SSH3-202ENST00000308298 CCDC144BQ3MJ40 725 aa22.99■■□□□ 1.27
SSH3-202ENST00000308298 C2CD5Q86YS7 1000 aa22.99■■□□□ 1.27
SSH3-202ENST00000308298 C17orf53Q8N3J3 647 aaPredicted RBP22.99■■□□□ 1.27
SSH3-202ENST00000308298 MXD3Q9BW11 206 aa22.99■■□□□ 1.27
SSH3-202ENST00000308298 SPZ1Q9BXG8 430 aa22.99■■□□□ 1.27
SSH3-202ENST00000308298 KLRF2D3W0D1 207 aa22.98■■□□□ 1.27
SSH3-202ENST00000308298 NT5DC1Q5TFE4 455 aa22.98■■□□□ 1.27
SSH3-202ENST00000308298 WWC2Q6AWC2 1192 aa22.98■■□□□ 1.27
SSH3-202ENST00000308298 FAM177A1Q8N128 213 aaPredicted RBP22.98■■□□□ 1.27
SSH3-202ENST00000308298 PARP1P09874 1014 aaKnown RBP22.98■■□□□ 1.27
SSH3-202ENST00000308298 PRR29P0C7W0 189 aa22.98■■□□□ 1.27
SSH3-202ENST00000308298 GABPAQ06546 454 aa22.98■■□□□ 1.27
SSH3-202ENST00000308298 GALNT17Q6IS24 598 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms