RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 CRNKL1Q9BZJ0 848 aaKnown RBP8.25□□□□□ -1.09
RGPD3-201ENST00000304514 TOMM22Q9NS69 142 aa8.25□□□□□ -1.09
RGPD3-201ENST00000304514 RGPD3A6NKT7 1758 aaPredicted RBP8.24□□□□□ -1.09
RGPD3-201ENST00000304514 RGPD4Q7Z3J3 1758 aa8.24□□□□□ -1.09
RGPD3-201ENST00000304514 hCG_1642624A0A1W2PR95 340 aa8.24□□□□□ -1.09
RGPD3-201ENST00000304514 USP17L12C9JPN9 530 aa8.24□□□□□ -1.09
RGPD3-201ENST00000304514 USP17L21D6R901 530 aa8.24□□□□□ -1.09
RGPD3-201ENST00000304514 RPS8P62241 208 aaKnown RBP8.24□□□□□ -1.09
RGPD3-201ENST00000304514 GRM4Q14833 912 aa8.24□□□□□ -1.09
RGPD3-201ENST00000304514 PTPN21Q16825 1174 aa8.24□□□□□ -1.09
RGPD3-201ENST00000304514 CCDC82Q8N4S0 544 aa8.24□□□□□ -1.09
RGPD3-201ENST00000304514 TC2NQ8N9U0 490 aa8.24□□□□□ -1.09
RGPD3-201ENST00000304514 CCDC112Q8NEF3 446 aa8.24□□□□□ -1.09
RGPD3-201ENST00000304514 TRMT1Q9NXH9 659 aaKnown RBP8.24□□□□□ -1.09
RGPD3-201ENST00000304514 HOOK1Q9UJC3 728 aaKnown RBP8.24□□□□□ -1.09
RGPD3-201ENST00000304514 VWA3AA6NCI4 1184 aa8.24□□□□□ -1.09
RGPD3-201ENST00000304514 DAGLBQ8NCG7 672 aa8.24□□□□□ -1.09
RGPD3-201ENST00000304514 DACH1Q9UI36 760 aa8.24□□□□□ -1.09
RGPD3-201ENST00000304514 XDHP47989 1333 aa8.24□□□□□ -1.09
RGPD3-201ENST00000304514 PSME4Q14997 1843 aa8.24□□□□□ -1.09
RGPD3-201ENST00000304514 SLFN14P0C7P3 912 aa8.24□□□□□ -1.09
RGPD3-201ENST00000304514 SFPQP23246 707 aaKnown RBP eCLIP8.24□□□□□ -1.09
RGPD3-201ENST00000304514 ERCC5P28715 1186 aaPredicted RBP8.24□□□□□ -1.09
RGPD3-201ENST00000304514 NAA30Q147X3 362 aaPredicted RBP8.24□□□□□ -1.09
RGPD3-201ENST00000304514 FAM205AQ6ZU69 1335 aa8.24□□□□□ -1.09
RGPD3-201ENST00000304514 PDCL2Q8N4E4 241 aa8.24□□□□□ -1.09
RGPD3-201ENST00000304514 SH3RF3Q8TEJ3 882 aaPredicted RBP8.24□□□□□ -1.09
RGPD3-201ENST00000304514 ARHGEF1Q92888 912 aaKnown RBP8.24□□□□□ -1.09
RGPD3-201ENST00000304514 SETDB2Q96T68 719 aa8.24□□□□□ -1.09
RGPD3-201ENST00000304514 KIF2AO00139 706 aaPredicted RBP8.24□□□□□ -1.09
RGPD3-201ENST00000304514 IGSF3O75054 1194 aa8.24□□□□□ -1.09
RGPD3-201ENST00000304514 TUBB4AP04350 444 aa8.24□□□□□ -1.09
RGPD3-201ENST00000304514 SCG2P13521 617 aa8.24□□□□□ -1.09
RGPD3-201ENST00000304514 GRIK5Q16478 980 aa8.24□□□□□ -1.09
RGPD3-201ENST00000304514 CGNQ9P2M7 1197 aaKnown RBP8.24□□□□□ -1.09
RGPD3-201ENST00000304514 TRIM75PA6NK02 468 aa8.23□□□□□ -1.09
RGPD3-201ENST00000304514 VEGFAP15692 232 aaPredicted RBP8.23□□□□□ -1.09
RGPD3-201ENST00000304514 NT5C2P49902 561 aa8.23□□□□□ -1.09
RGPD3-201ENST00000304514 ZNF827Q17R98 1081 aa8.23□□□□□ -1.09
RGPD3-201ENST00000304514 TTC38Q5R3I4 469 aa8.23□□□□□ -1.09
RGPD3-201ENST00000304514 C12orf60Q5U649 245 aa8.23□□□□□ -1.09
RGPD3-201ENST00000304514 TOGARAM2Q6ZUX3 1019 aa8.23□□□□□ -1.09
RGPD3-201ENST00000304514 SMAP1Q8IYB5 467 aaPredicted RBP8.23□□□□□ -1.09
RGPD3-201ENST00000304514 SAMSN1Q9NSI8 373 aaKnown RBP8.23□□□□□ -1.09
RGPD3-201ENST00000304514 PCDHA6Q9UN73 950 aa8.23□□□□□ -1.09
RGPD3-201ENST00000304514 PCDHA8Q9Y5H6 950 aa8.23□□□□□ -1.09
RGPD3-201ENST00000304514 SERPINC1P01008 464 aa8.23□□□□□ -1.09
RGPD3-201ENST00000304514 FECHP22830 423 aa8.23□□□□□ -1.09
RGPD3-201ENST00000304514 TRAPPC10P48553 1259 aa8.23□□□□□ -1.09
RGPD3-201ENST00000304514 IQCA1Q86XH1 822 aa8.23□□□□□ -1.09
RGPD3-201ENST00000304514 KIFC2Q96AC6 838 aa8.23□□□□□ -1.09
RGPD3-201ENST00000304514 MTRQ99707 1265 aa8.23□□□□□ -1.09
RGPD3-201ENST00000304514 RTFDC1Q9BY42 306 aaPredicted RBP8.23□□□□□ -1.09
RGPD3-201ENST00000304514 SLX4Q8IY92 1834 aa8.23□□□□□ -1.09
RGPD3-201ENST00000304514 GNPATO15228 680 aa8.23□□□□□ -1.09
RGPD3-201ENST00000304514 BMP15O95972 392 aa8.23□□□□□ -1.09
RGPD3-201ENST00000304514 USP17L8P0C7I0 530 aa8.23□□□□□ -1.09
RGPD3-201ENST00000304514 XBP1P17861 261 aa8.23□□□□□ -1.09
RGPD3-201ENST00000304514 GRAPQ13588 217 aa8.23□□□□□ -1.09
RGPD3-201ENST00000304514 NBPF5PQ86XG9 351 aaPredicted RBP8.23□□□□□ -1.09
RGPD3-201ENST00000304514 TRMT44Q8IYL2 757 aaKnown RBP8.23□□□□□ -1.09
RGPD3-201ENST00000304514 GRAPLQ8TC17 118 aaPredicted RBP8.23□□□□□ -1.09
RGPD3-201ENST00000304514 CERKQ8TCT0 537 aa8.23□□□□□ -1.09
RGPD3-201ENST00000304514 TAOK2Q9UL54 1235 aa8.23□□□□□ -1.09
RGPD3-201ENST00000304514 SYNRGQ9UMZ2 1314 aa8.23□□□□□ -1.09
RGPD3-201ENST00000304514 ZNF174Q15697 407 aa8.22□□□□□ -1.09
RGPD3-201ENST00000304514 DHX58Q96C10 678 aa8.22□□□□□ -1.09
RGPD3-201ENST00000304514 ERO1AQ96HE7 468 aa8.22□□□□□ -1.09
RGPD3-201ENST00000304514 PCDHA4Q9UN74 947 aa8.22□□□□□ -1.09
RGPD3-201ENST00000304514 NOVP48745 357 aa8.22□□□□□ -1.09
RGPD3-201ENST00000304514 TNS1Q9HBL0 1735 aaKnown RBP8.22□□□□□ -1.09
RGPD3-201ENST00000304514 PLIN4Q96Q06 1357 aa8.22□□□□□ -1.09
RGPD3-201ENST00000304514 CCP110O43303 1012 aa8.22□□□□□ -1.09
RGPD3-201ENST00000304514 LRRC15Q8TF66 581 aa8.22□□□□□ -1.09
RGPD3-201ENST00000304514 NLRP3Q96P20 1036 aa8.22□□□□□ -1.09
RGPD3-201ENST00000304514 ZNF215Q9UL58 517 aaPredicted RBP8.22□□□□□ -1.09
RGPD3-201ENST00000304514 ITIH6Q6UXX5 1313 aa8.22□□□□□ -1.09
RGPD3-201ENST00000304514 IL1R1P14778 569 aa8.22□□□□□ -1.09
RGPD3-201ENST00000304514 GLIPR1L2Q4G1C9 344 aa8.22□□□□□ -1.09
RGPD3-201ENST00000304514 ZNF592Q92610 1267 aa8.22□□□□□ -1.09
RGPD3-201ENST00000304514 NFE2L3Q9Y4A8 694 aa8.22□□□□□ -1.09
RGPD3-201ENST00000304514 STXBP3O00186 592 aa8.22□□□□□ -1.09
RGPD3-201ENST00000304514 CASP1P29466 404 aa8.22□□□□□ -1.09
RGPD3-201ENST00000304514 PPP4CP60510 307 aa8.22□□□□□ -1.09
RGPD3-201ENST00000304514 GPSM2P81274 684 aa8.22□□□□□ -1.09
RGPD3-201ENST00000304514 KMT5BQ4FZB7 885 aa8.22□□□□□ -1.09
RGPD3-201ENST00000304514 SPECC1LQ69YQ0 1117 aa8.22□□□□□ -1.09
RGPD3-201ENST00000304514 SYT10Q6XYQ8 523 aa8.22□□□□□ -1.09
RGPD3-201ENST00000304514 PIK3AP1Q6ZUJ8 805 aa8.22□□□□□ -1.09
RGPD3-201ENST00000304514 STAG2Q8N3U4 1231 aa8.22□□□□□ -1.09
RGPD3-201ENST00000304514 KIF18AQ8NI77 898 aa8.22□□□□□ -1.09
RGPD3-201ENST00000304514 PPP2R2CQ9Y2T4 447 aa8.22□□□□□ -1.09
RGPD3-201ENST00000304514 A0A0G2JS52 829 aa8.21□□□□□ -1.09
RGPD3-201ENST00000304514 TOP1P11387 765 aaKnown RBP8.21□□□□□ -1.09
RGPD3-201ENST00000304514 PTGDRQ13258 359 aa8.21□□□□□ -1.09
RGPD3-201ENST00000304514 CFAP100Q494V2 611 aa8.21□□□□□ -1.09
RGPD3-201ENST00000304514 WWC2Q6AWC2 1192 aa8.21□□□□□ -1.09
RGPD3-201ENST00000304514 GSDMAQ96QA5 445 aa8.21□□□□□ -1.09
RGPD3-201ENST00000304514 PANX2Q96RD6 677 aa8.21□□□□□ -1.09
RGPD3-201ENST00000304514 ZPR1O75312 459 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms