RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 EEF2P13639 858 aaKnown RBP31.54■■■□□ 2.64
CDKN2A-201ENST00000304494 ELNP15502 786 aa31.54■■■□□ 2.64
CDKN2A-201ENST00000304494 MTFR1Q15390 333 aa31.54■■■□□ 2.64
CDKN2A-201ENST00000304494 Q3C1V9 767 aa31.54■■■□□ 2.64
CDKN2A-201ENST00000304494 HELLSQ9NRZ9 838 aa31.54■■■□□ 2.64
CDKN2A-201ENST00000304494 HOXC10Q9NYD6 342 aa31.54■■■□□ 2.64
CDKN2A-201ENST00000304494 GJD2Q9UKL4 321 aa31.54■■■□□ 2.64
CDKN2A-201ENST00000304494 TRIM6-TRIM34B2RNG4 842 aa31.53■■■□□ 2.64
CDKN2A-201ENST00000304494 SLC3A2P08195 630 aaKnown RBP31.53■■■□□ 2.64
CDKN2A-201ENST00000304494 ATP2B2Q01814 1243 aa31.53■■■□□ 2.64
CDKN2A-201ENST00000304494 COG2Q14746 738 aa31.53■■■□□ 2.64
CDKN2A-201ENST00000304494 POTEEQ6S8J3 1075 aa31.53■■■□□ 2.64
CDKN2A-201ENST00000304494 SOCS4Q8WXH5 440 aa31.53■■■□□ 2.64
CDKN2A-201ENST00000304494 OSBPL3Q9H4L5 887 aa31.53■■■□□ 2.64
CDKN2A-201ENST00000304494 SPDYE16A6NNV3 312 aaPredicted RBP31.52■■■□□ 2.64
CDKN2A-201ENST00000304494 CCL5P13501 91 aa31.52■■■□□ 2.64
CDKN2A-201ENST00000304494 PLEKHM2Q8IWE5 1019 aa31.52■■■□□ 2.64
CDKN2A-201ENST00000304494 ZNF444Q8N0Y2 327 aaPredicted RBP31.52■■■□□ 2.64
CDKN2A-201ENST00000304494 NKX2-3Q8TAU0 364 aa31.52■■■□□ 2.64
CDKN2A-201ENST00000304494 CNMDO75829 334 aa31.51■■■□□ 2.63
CDKN2A-201ENST00000304494 INHAP05111 366 aa31.51■■■□□ 2.63
CDKN2A-201ENST00000304494 PDE4BQ07343 736 aa31.51■■■□□ 2.63
CDKN2A-201ENST00000304494 CCDC129Q6ZRS4 1044 aa31.51■■■□□ 2.63
CDKN2A-201ENST00000304494 SPICE1Q8N0Z3 855 aa31.51■■■□□ 2.63
CDKN2A-201ENST00000304494 NUDT12Q9BQG2 462 aa31.51■■■□□ 2.63
CDKN2A-201ENST00000304494 RNF208Q9H0X6 261 aa31.51■■■□□ 2.63
CDKN2A-201ENST00000304494 PORCNQ9H237 461 aa31.51■■■□□ 2.63
CDKN2A-201ENST00000304494 CWC22Q9HCG8 908 aaKnown RBP31.51■■■□□ 2.63
CDKN2A-201ENST00000304494 GOPCQ9HD26 462 aa31.51■■■□□ 2.63
CDKN2A-201ENST00000304494 WDR46O15213 610 aaKnown RBP31.5■■■□□ 2.63
CDKN2A-201ENST00000304494 KIAA1755Q5JYT7 1200 aa31.5■■■□□ 2.63
CDKN2A-201ENST00000304494 RILPL2Q969X0 211 aa31.5■■■□□ 2.63
CDKN2A-201ENST00000304494 GNL3Q9BVP2 549 aaKnown RBP eCLIP31.5■■■□□ 2.63
CDKN2A-201ENST00000304494 PPARAQ07869 468 aa31.49■■■□□ 2.63
CDKN2A-201ENST00000304494 MCMDC2Q4G0Z9 681 aa31.49■■■□□ 2.63
CDKN2A-201ENST00000304494 GPR142Q7Z601 462 aa31.49■■■□□ 2.63
CDKN2A-201ENST00000304494 PLEKHH3Q7Z736 793 aa31.49■■■□□ 2.63
CDKN2A-201ENST00000304494 GJB1P08034 283 aa31.48■■■□□ 2.63
CDKN2A-201ENST00000304494 MB21D1Q8N884 522 aa31.48■■■□□ 2.63
CDKN2A-201ENST00000304494 BTBD7Q9P203 1132 aa31.48■■■□□ 2.63
CDKN2A-201ENST00000304494 NYAP2Q9P242 653 aa31.48■■■□□ 2.63
CDKN2A-201ENST00000304494 GREB1LQ9C091 1923 aaPredicted RBP31.47■■■□□ 2.63
CDKN2A-201ENST00000304494 PRDM1O75626 825 aa31.47■■■□□ 2.63
CDKN2A-201ENST00000304494 FLOT1O75955 427 aa31.47■■■□□ 2.63
CDKN2A-201ENST00000304494 HMGCRP04035 888 aa31.47■■■□□ 2.63
CDKN2A-201ENST00000304494 IRX6P78412 446 aaPredicted RBP31.47■■■□□ 2.63
CDKN2A-201ENST00000304494 FAM227BQ96M60 508 aa31.47■■■□□ 2.63
CDKN2A-201ENST00000304494 UNC93B1Q9H1C4 597 aa31.47■■■□□ 2.63
CDKN2A-201ENST00000304494 KIAA0100Q14667 2235 aaKnown RBP31.47■■■□□ 2.63
CDKN2A-201ENST00000304494 XRCC5P13010 732 aaKnown RBP31.46■■■□□ 2.63
CDKN2A-201ENST00000304494 GJA8P48165 433 aa31.46■■■□□ 2.63
CDKN2A-201ENST00000304494 DOCK3Q8IZD9 2030 aa31.46■■■□□ 2.63
CDKN2A-201ENST00000304494 MKI67P46013 3256 aaKnown RBP31.45■■■□□ 2.63
CDKN2A-201ENST00000304494 FOXP2O15409 715 aa31.45■■■□□ 2.63
CDKN2A-201ENST00000304494 CYP2B6P20813 491 aa31.45■■■□□ 2.63
CDKN2A-201ENST00000304494 DSG3P32926 999 aa31.45■■■□□ 2.63
CDKN2A-201ENST00000304494 TRMT44Q8IYL2 757 aaKnown RBP31.45■■■□□ 2.63
CDKN2A-201ENST00000304494 IGKV6D-41A0A0C4DH26 115 aa31.44■■■□□ 2.62
CDKN2A-201ENST00000304494 A0A0D9SFI3 127 aa31.44■■■□□ 2.62
CDKN2A-201ENST00000304494 RAD21O60216 631 aa31.44■■■□□ 2.62
CDKN2A-201ENST00000304494 RGS2P41220 211 aa31.44■■■□□ 2.62
CDKN2A-201ENST00000304494 MORN1Q5T089 497 aa31.44■■■□□ 2.62
CDKN2A-201ENST00000304494 VPS53Q5VIR6 699 aa31.44■■■□□ 2.62
CDKN2A-201ENST00000304494 WDR78Q5VTH9 848 aa31.44■■■□□ 2.62
CDKN2A-201ENST00000304494 PLXNB2O15031 1838 aa31.44■■■□□ 2.62
CDKN2A-201ENST00000304494 TSPY3P0CV98 308 aa31.43■■■□□ 2.62
CDKN2A-201ENST00000304494 TSPY8P0CW00 308 aa31.43■■■□□ 2.62
CDKN2A-201ENST00000304494 NMIQ13287 307 aaPredicted RBP31.43■■■□□ 2.62
CDKN2A-201ENST00000304494 ALX1Q15699 326 aa31.43■■■□□ 2.62
CDKN2A-201ENST00000304494 USP6NLQ92738 828 aa31.43■■■□□ 2.62
CDKN2A-201ENST00000304494 SYNPO2Q9UMS6 1093 aa31.43■■■□□ 2.62
CDKN2A-201ENST00000304494 IVNS1ABPQ9Y6Y0 642 aa31.43■■■□□ 2.62
CDKN2A-201ENST00000304494 PLIN4Q96Q06 1357 aa31.43■■■□□ 2.62
CDKN2A-201ENST00000304494 CAPN2P17655 700 aa31.42■■■□□ 2.62
CDKN2A-201ENST00000304494 MFAP1P55081 439 aaKnown RBP31.42■■■□□ 2.62
CDKN2A-201ENST00000304494 NEDD1Q8NHV4 660 aa31.42■■■□□ 2.62
CDKN2A-201ENST00000304494 CLIP2Q9UDT6 1046 aa31.42■■■□□ 2.62
CDKN2A-201ENST00000304494 A0A0G2JMZ2 1700 aa31.41■■■□□ 2.62
CDKN2A-201ENST00000304494 SDSP20132 328 aa31.41■■■□□ 2.62
CDKN2A-201ENST00000304494 U2AF1L4Q8WU68 220 aaKnown RBP31.41■■■□□ 2.62
CDKN2A-201ENST00000304494 TRIB2Q92519 343 aa31.41■■■□□ 2.62
CDKN2A-201ENST00000304494 SHISA4Q96DD7 197 aa31.41■■■□□ 2.62
CDKN2A-201ENST00000304494 CEP95Q96GE4 821 aa31.41■■■□□ 2.62
CDKN2A-201ENST00000304494 APBA2Q99767 749 aa31.41■■■□□ 2.62
CDKN2A-201ENST00000304494 SPATC1LQ9H0A9 340 aa31.41■■■□□ 2.62
CDKN2A-201ENST00000304494 PAK6Q9NQU5 681 aaPredicted RBP31.41■■■□□ 2.62
CDKN2A-201ENST00000304494 MTMR4Q9NYA4 1195 aa31.41■■■□□ 2.62
CDKN2A-201ENST00000304494 ANAPC4Q9UJX5 808 aa31.41■■■□□ 2.62
CDKN2A-201ENST00000304494 RLFQ13129 1914 aa31.4■■■□□ 2.62
CDKN2A-201ENST00000304494 SLC15A5A6NIM6 579 aa31.4■■■□□ 2.62
CDKN2A-201ENST00000304494 TTLL1O95922 423 aa31.4■■■□□ 2.62
CDKN2A-201ENST00000304494 PTPREP23469 700 aa31.4■■■□□ 2.62
CDKN2A-201ENST00000304494 TFAP4Q01664 338 aa31.4■■■□□ 2.62
CDKN2A-201ENST00000304494 MAP2K5Q13163 448 aa31.4■■■□□ 2.62
CDKN2A-201ENST00000304494 SHCBP1Q8NEM2 672 aa31.4■■■□□ 2.62
CDKN2A-201ENST00000304494 MKL1Q969V6 931 aa31.4■■■□□ 2.62
CDKN2A-201ENST00000304494 ATG4CQ96DT6 458 aa31.4■■■□□ 2.62
CDKN2A-201ENST00000304494 CCDC171Q6TFL3 1326 aa31.4■■■□□ 2.62
CDKN2A-201ENST00000304494 F5H6K3 240 aa31.39■■■□□ 2.62
CDKN2A-201ENST00000304494 HIP1O00291 1037 aa31.39■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms