RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 ZNF792Q3KQV3 632 aa7.94□□□□□ -1.14
ITGB1-201ENST00000302278 GJC2Q5T442 439 aaPredicted RBP7.94□□□□□ -1.14
ITGB1-201ENST00000302278 SPATC1LQ9H0A9 340 aa7.94□□□□□ -1.14
ITGB1-201ENST00000302278 UPF3AQ9H1J1 476 aaKnown RBP7.94□□□□□ -1.14
ITGB1-201ENST00000302278 HOXC10Q9NYD6 342 aa7.94□□□□□ -1.14
ITGB1-201ENST00000302278 RAI14Q9P0K7 980 aa7.94□□□□□ -1.14
ITGB1-201ENST00000302278 SERPINB13Q9UIV8 391 aa7.94□□□□□ -1.14
ITGB1-201ENST00000302278 NOP58Q9Y2X3 529 aaKnown RBP7.94□□□□□ -1.14
ITGB1-201ENST00000302278 DSG3P32926 999 aa7.93□□□□□ -1.14
ITGB1-201ENST00000302278 CYP2C19P33261 490 aa7.93□□□□□ -1.14
ITGB1-201ENST00000302278 COPB2P35606 906 aa7.93□□□□□ -1.14
ITGB1-201ENST00000302278 FPGSQ05932 587 aa7.93□□□□□ -1.14
ITGB1-201ENST00000302278 MAPKAPK5Q8IW41 473 aa7.93□□□□□ -1.14
ITGB1-201ENST00000302278 ASB2Q96Q27 587 aa7.93□□□□□ -1.14
ITGB1-201ENST00000302278 PAGR1Q9BTK6 254 aa7.93□□□□□ -1.14
ITGB1-201ENST00000302278 RPAP3Q9H6T3 665 aaPredicted RBP7.93□□□□□ -1.14
ITGB1-201ENST00000302278 PALD1Q9ULE6 856 aa7.93□□□□□ -1.14
ITGB1-201ENST00000302278 ATP11BQ9Y2G3 1177 aa7.93□□□□□ -1.14
ITGB1-201ENST00000302278 MYH4Q9Y623 1939 aa7.93□□□□□ -1.14
ITGB1-201ENST00000302278 MOXD2PA6NHM9 499 aa7.93□□□□□ -1.14
ITGB1-201ENST00000302278 SRGAP3O43295 1099 aa7.93□□□□□ -1.14
ITGB1-201ENST00000302278 ZNF865P0CJ78 1059 aaPredicted RBP7.93□□□□□ -1.14
ITGB1-201ENST00000302278 FAAP100Q0VG06 881 aa7.93□□□□□ -1.14
ITGB1-201ENST00000302278 COG2Q14746 738 aa7.93□□□□□ -1.14
ITGB1-201ENST00000302278 GRIN2CQ14957 1233 aa7.93□□□□□ -1.14
ITGB1-201ENST00000302278 ZNF467Q7Z7K2 595 aaPredicted RBP7.93□□□□□ -1.14
ITGB1-201ENST00000302278 NOB1Q9ULX3 412 aaKnown RBP7.93□□□□□ -1.14
ITGB1-201ENST00000302278 IVNS1ABPQ9Y6Y0 642 aa7.93□□□□□ -1.14
ITGB1-201ENST00000302278 A0A1W2PQ45 241 aaPredicted RBP7.93□□□□□ -1.14
ITGB1-201ENST00000302278 A0A1W2PQY0 241 aa7.93□□□□□ -1.14
ITGB1-201ENST00000302278 SLC25A27O95847 323 aa7.93□□□□□ -1.14
ITGB1-201ENST00000302278 TIMP1P01033 207 aa7.93□□□□□ -1.14
ITGB1-201ENST00000302278 DNAJB2P25686 324 aa7.93□□□□□ -1.14
ITGB1-201ENST00000302278 TNNI3KQ59H18 835 aa7.93□□□□□ -1.14
ITGB1-201ENST00000302278 MAMDC4Q6UXC1 1216 aa7.93□□□□□ -1.14
ITGB1-201ENST00000302278 CRACR2BQ8N4Y2 399 aaPredicted RBP7.93□□□□□ -1.14
ITGB1-201ENST00000302278 REPS2Q8NFH8 660 aa7.93□□□□□ -1.14
ITGB1-201ENST00000302278 RIOK1Q9BRS2 568 aaKnown RBP7.93□□□□□ -1.14
ITGB1-201ENST00000302278 SEZ6LQ9BYH1 1024 aa7.93□□□□□ -1.14
ITGB1-201ENST00000302278 TANGO6Q9C0B7 1094 aa7.93□□□□□ -1.14
ITGB1-201ENST00000302278 FPGT-TNNI3KV9GXZ4 949 aa7.93□□□□□ -1.14
ITGB1-201ENST00000302278 BAZ2AQ9UIF9 1905 aaKnown RBP7.93□□□□□ -1.14
ITGB1-201ENST00000302278 MROH7Q68CQ1 1323 aa7.93□□□□□ -1.14
ITGB1-201ENST00000302278 SMCHD1A6NHR9 2005 aa7.93□□□□□ -1.14
ITGB1-201ENST00000302278 ABCB5Q2M3G0 1257 aa7.92□□□□□ -1.14
ITGB1-201ENST00000302278 SSH3Q8TE77 659 aa7.92□□□□□ -1.14
ITGB1-201ENST00000302278 RNPC3Q96LT9 517 aaKnown RBP7.92□□□□□ -1.14
ITGB1-201ENST00000302278 PIH1D3Q9NQM4 214 aaKnown RBP7.92□□□□□ -1.14
ITGB1-201ENST00000302278 SMC4Q9NTJ3 1288 aa7.92□□□□□ -1.14
ITGB1-201ENST00000302278 LRP2BPQ9P2M1 347 aa7.92□□□□□ -1.14
ITGB1-201ENST00000302278 ADCYAP1R1P41586 468 aa7.92□□□□□ -1.14
ITGB1-201ENST00000302278 TTC6Q86TZ1 520 aa7.92□□□□□ -1.14
ITGB1-201ENST00000302278 SLC43A3Q8NBI5 491 aa7.92□□□□□ -1.14
ITGB1-201ENST00000302278 FAM161BQ96MY7 647 aa7.92□□□□□ -1.14
ITGB1-201ENST00000302278 CXXC1Q9P0U4 656 aaPredicted RBP7.92□□□□□ -1.14
ITGB1-201ENST00000302278 ELP1O95163 1332 aa7.92□□□□□ -1.14
ITGB1-201ENST00000302278 TLE2Q04725 743 aa7.92□□□□□ -1.14
ITGB1-201ENST00000302278 CERKLQ49MI3 558 aaPredicted RBP7.92□□□□□ -1.14
ITGB1-201ENST00000302278 MFSD5Q6N075 450 aa7.92□□□□□ -1.14
ITGB1-201ENST00000302278 RIOX2Q8IUF8 465 aa7.92□□□□□ -1.14
ITGB1-201ENST00000302278 ACER1Q8TDN7 264 aa7.92□□□□□ -1.14
ITGB1-201ENST00000302278 ZNF576Q9H609 170 aa7.92□□□□□ -1.14
ITGB1-201ENST00000302278 COL4A6Q14031 1691 aa7.92□□□□□ -1.14
ITGB1-201ENST00000302278 CHD9Q3L8U1 2897 aa7.92□□□□□ -1.14
ITGB1-201ENST00000302278 A0A1W2PRG0 241 aa7.91□□□□□ -1.14
ITGB1-201ENST00000302278 ERCC3P19447 782 aa7.91□□□□□ -1.14
ITGB1-201ENST00000302278 ATN1P54259 1190 aaPredicted RBP7.91□□□□□ -1.14
ITGB1-201ENST00000302278 SIAH1Q8IUQ4 282 aa7.91□□□□□ -1.14
ITGB1-201ENST00000302278 CCAR1Q8IX12 1150 aaKnown RBP7.91□□□□□ -1.14
ITGB1-201ENST00000302278 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.91□□□□□ -1.14
ITGB1-201ENST00000302278 HERVK_113Q902F9 699 aa7.91□□□□□ -1.14
ITGB1-201ENST00000302278 THEGQ9P2T0 379 aa7.91□□□□□ -1.14
ITGB1-201ENST00000302278 LAMA2P24043 3122 aaKnown RBP7.91□□□□□ -1.14
ITGB1-201ENST00000302278 DNAJC25-GNG10A0A024R161 153 aa7.91□□□□□ -1.14
ITGB1-201ENST00000302278 ATP2A1O14983 1001 aa7.91□□□□□ -1.14
ITGB1-201ENST00000302278 FAM47AQ5JRC9 791 aa7.91□□□□□ -1.14
ITGB1-201ENST00000302278 CCDC174Q6PII3 467 aa7.91□□□□□ -1.14
ITGB1-201ENST00000302278 C16orf59Q7L2K0 433 aa7.91□□□□□ -1.14
ITGB1-201ENST00000302278 TIFAQ96CG3 184 aa7.91□□□□□ -1.14
ITGB1-201ENST00000302278 TRIM34Q9BYJ4 488 aa7.91□□□□□ -1.14
ITGB1-201ENST00000302278 SWAP70Q9UH65 585 aa7.91□□□□□ -1.14
ITGB1-201ENST00000302278 TMX2Q9Y320 296 aa7.91□□□□□ -1.14
ITGB1-201ENST00000302278 CDH23Q9H251 3354 aa7.91□□□□□ -1.14
ITGB1-201ENST00000302278 ZBED9Q6R2W3 1325 aa7.91□□□□□ -1.14
ITGB1-201ENST00000302278 MUC3AQ02505 3323 aa7.91□□□□□ -1.14
ITGB1-201ENST00000302278 PNMA6EA0A0J9YXQ4 647 aa7.91□□□□□ -1.14
ITGB1-201ENST00000302278 CD4P01730 458 aa7.91□□□□□ -1.14
ITGB1-201ENST00000302278 RARSP54136 660 aaKnown RBP7.91□□□□□ -1.14
ITGB1-201ENST00000302278 TMEM240Q5SV17 173 aa7.91□□□□□ -1.14
ITGB1-201ENST00000302278 RNF180Q86T96 592 aa7.91□□□□□ -1.14
ITGB1-201ENST00000302278 MAGEB6Q8N7X4 407 aa7.91□□□□□ -1.14
ITGB1-201ENST00000302278 A0A0C4DFX4 3053 aa7.91□□□□□ -1.14
ITGB1-201ENST00000302278 WDR46O15213 610 aaKnown RBP7.9□□□□□ -1.14
ITGB1-201ENST00000302278 ANP32CO43423 234 aa7.9□□□□□ -1.14
ITGB1-201ENST00000302278 GNAI2P04899 355 aa7.9□□□□□ -1.14
ITGB1-201ENST00000302278 AKR1A1P14550 325 aa7.9□□□□□ -1.14
ITGB1-201ENST00000302278 MRPS5P82675 430 aaKnown RBP7.9□□□□□ -1.14
ITGB1-201ENST00000302278 PPIGQ13427 754 aaKnown RBP eCLIP7.9□□□□□ -1.14
ITGB1-201ENST00000302278 KIAA1755Q5JYT7 1200 aa7.9□□□□□ -1.14
ITGB1-201ENST00000302278 CCDC158Q5M9N0 1113 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms