RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 RPS8P62241 208 aaKnown RBP21.5■■□□□ 1.03
TSR1-201ENST00000301364 KLHL30Q0D2K2 578 aa21.5■■□□□ 1.03
TSR1-201ENST00000301364 SFMBT2Q5VUG0 894 aa21.5■■□□□ 1.03
TSR1-201ENST00000301364 CMTR1Q8N1G2 835 aaKnown RBP21.5■■□□□ 1.03
TSR1-201ENST00000301364 NT5C3AQ9H0P0 336 aa21.5■■□□□ 1.03
TSR1-201ENST00000301364 FLOT1O75955 427 aa21.5■■□□□ 1.03
TSR1-201ENST00000301364 ADORA1P30542 326 aa21.49■■□□□ 1.03
TSR1-201ENST00000301364 GNA14O95837 355 aa21.49■■□□□ 1.03
TSR1-201ENST00000301364 CROCCP2Q86T23 111 aa21.49■■□□□ 1.03
TSR1-201ENST00000301364 RNF26Q9BY78 433 aaPredicted RBP21.49■■□□□ 1.03
TSR1-201ENST00000301364 STAMBPO95630 424 aa21.49■■□□□ 1.03
TSR1-201ENST00000301364 CCDC50Q8IVM0 306 aa21.49■■□□□ 1.03
TSR1-201ENST00000301364 CROCC2H7BZ55 1655 aa21.49■■□□□ 1.03
TSR1-201ENST00000301364 RABGGTAQ92696 567 aa21.49■■□□□ 1.03
TSR1-201ENST00000301364 DNM3Q9UQ16 869 aa21.49■■□□□ 1.03
TSR1-201ENST00000301364 UTP11Q9Y3A2 253 aaKnown RBP21.49■■□□□ 1.03
TSR1-201ENST00000301364 SH2D4AQ9H788 454 aa21.48■■□□□ 1.03
TSR1-201ENST00000301364 SMCO2A6NFE2 343 aa21.48■■□□□ 1.03
TSR1-201ENST00000301364 ATP8B1O43520 1251 aa21.48■■□□□ 1.03
TSR1-201ENST00000301364 LONP1P36776 959 aaKnown RBP21.48■■□□□ 1.03
TSR1-201ENST00000301364 SND1Q7KZF4 910 aaKnown RBP eCLIP21.48■■□□□ 1.03
TSR1-201ENST00000301364 PHKA1P46020 1223 aa21.48■■□□□ 1.03
TSR1-201ENST00000301364 PPP1R14CQ8TAE6 165 aa21.48■■□□□ 1.03
TSR1-201ENST00000301364 C8orf37Q96NL8 207 aa21.48■■□□□ 1.03
TSR1-201ENST00000301364 GREM2Q9H772 168 aa21.48■■□□□ 1.03
TSR1-201ENST00000301364 FAM207AQ9NSI2 230 aaPredicted RBP21.48■■□□□ 1.03
TSR1-201ENST00000301364 FMNL1O95466 1100 aaPredicted RBP21.48■■□□□ 1.03
TSR1-201ENST00000301364 PLCB3Q01970 1234 aa21.48■■□□□ 1.03
TSR1-201ENST00000301364 RRAGAQ7L523 313 aa21.48■■□□□ 1.03
TSR1-201ENST00000301364 TCHPQ9BT92 498 aa21.48■■□□□ 1.03
TSR1-201ENST00000301364 TRAPPC10P48553 1259 aa21.47■■□□□ 1.03
TSR1-201ENST00000301364 BCAMP50895 628 aa21.47■■□□□ 1.03
TSR1-201ENST00000301364 CCDC25Q86WR0 208 aa21.47■■□□□ 1.03
TSR1-201ENST00000301364 POTEDQ86YR6 584 aa21.47■■□□□ 1.03
TSR1-201ENST00000301364 TBC1D22AQ8WUA7 517 aa21.47■■□□□ 1.03
TSR1-201ENST00000301364 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.47■■□□□ 1.03
TSR1-201ENST00000301364 SPHKAPQ2M3C7 1700 aa21.47■■□□□ 1.03
TSR1-201ENST00000301364 PRAMEF22A3QJZ6 481 aa21.47■■□□□ 1.03
TSR1-201ENST00000301364 SMIM23A6NLE4 172 aa21.47■■□□□ 1.03
TSR1-201ENST00000301364 M0R2C6 588 aa21.47■■□□□ 1.03
TSR1-201ENST00000301364 ATP5DP30049 168 aa21.47■■□□□ 1.03
TSR1-201ENST00000301364 HSPA2P54652 639 aa21.47■■□□□ 1.03
TSR1-201ENST00000301364 RPS6KA1Q15418 735 aa21.47■■□□□ 1.03
TSR1-201ENST00000301364 CLUL1Q15846 466 aa21.47■■□□□ 1.03
TSR1-201ENST00000301364 C2CD5Q86YS7 1000 aa21.47■■□□□ 1.03
TSR1-201ENST00000301364 SYCE1Q8N0S2 351 aa21.47■■□□□ 1.03
TSR1-201ENST00000301364 SDR42E1Q8WUS8 393 aa21.47■■□□□ 1.03
TSR1-201ENST00000301364 TYW1BQ6NUM6 668 aa21.47■■□□□ 1.03
TSR1-201ENST00000301364 DDX17Q92841 729 aaKnown RBP21.47■■□□□ 1.03
TSR1-201ENST00000301364 KIFAP3Q92845 792 aa21.47■■□□□ 1.03
TSR1-201ENST00000301364 PDLIM2Q96JY6 352 aa21.47■■□□□ 1.03
TSR1-201ENST00000301364 RNF17Q9BXT8 1623 aaKnown RBP21.47■■□□□ 1.03
TSR1-201ENST00000301364 SWAP70Q9UH65 585 aa21.47■■□□□ 1.03
TSR1-201ENST00000301364 EIF6P56537 245 aaKnown RBP21.46■■□□□ 1.03
TSR1-201ENST00000301364 PTGDRQ13258 359 aa21.46■■□□□ 1.03
TSR1-201ENST00000301364 MAPKAPK5Q8IW41 473 aa21.46■■□□□ 1.03
TSR1-201ENST00000301364 SYMPKQ92797 1274 aaKnown RBP21.46■■□□□ 1.03
TSR1-201ENST00000301364 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.46■■□□□ 1.03
TSR1-201ENST00000301364 SPOPO43791 374 aa21.46■■□□□ 1.03
TSR1-201ENST00000301364 CEP104O60308 925 aa21.46■■□□□ 1.03
TSR1-201ENST00000301364 HPDP32754 393 aaPredicted RBP21.46■■□□□ 1.03
TSR1-201ENST00000301364 PLS1Q14651 629 aa21.46■■□□□ 1.03
TSR1-201ENST00000301364 UBL4BQ8N7F7 174 aa21.46■■□□□ 1.03
TSR1-201ENST00000301364 PNMA1Q8ND90 353 aa21.46■■□□□ 1.03
TSR1-201ENST00000301364 TGFBRAP1Q8WUH2 860 aa21.46■■□□□ 1.03
TSR1-201ENST00000301364 LAMC1P11047 1609 aa21.46■■□□□ 1.03
TSR1-201ENST00000301364 ADD2P35612 726 aa21.46■■□□□ 1.03
TSR1-201ENST00000301364 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.46■■□□□ 1.03
TSR1-201ENST00000301364 CCNL1Q9UK58 526 aaPredicted RBP21.46■■□□□ 1.03
TSR1-201ENST00000301364 GLI2P10070 1586 aa21.46■■□□□ 1.03
TSR1-201ENST00000301364 PHLPP2Q6ZVD8 1323 aa21.46■■□□□ 1.03
TSR1-201ENST00000301364 RPN1P04843 607 aaKnown RBP21.45■■□□□ 1.03
TSR1-201ENST00000301364 GJC1P36383 396 aa21.45■■□□□ 1.03
TSR1-201ENST00000301364 SLC1A4P43007 532 aa21.45■■□□□ 1.03
TSR1-201ENST00000301364 RNASE9P60153 205 aaKnown RBP21.45■■□□□ 1.03
TSR1-201ENST00000301364 EPN1Q9Y6I3 576 aaPredicted RBP21.45■■□□□ 1.03
TSR1-201ENST00000301364 OSBP2Q969R2 916 aa21.45■■□□□ 1.02
TSR1-201ENST00000301364 FTOQ9C0B1 505 aaKnown RBP eCLIP21.45■■□□□ 1.02
TSR1-201ENST00000301364 MAGEF1Q9HAY2 307 aa21.45■■□□□ 1.02
TSR1-201ENST00000301364 ATP8A2Q9NTI2 1148 aa21.45■■□□□ 1.02
TSR1-201ENST00000301364 MYO1AQ9UBC5 1043 aa21.45■■□□□ 1.02
TSR1-201ENST00000301364 CDC23Q9UJX2 597 aa21.45■■□□□ 1.02
TSR1-201ENST00000301364 CEP83Q9Y592 693 aa21.45■■□□□ 1.02
TSR1-201ENST00000301364 KDM3AQ9Y4C1 1321 aa21.45■■□□□ 1.02
TSR1-201ENST00000301364 CEP128Q6ZU80 1094 aa21.45■■□□□ 1.02
TSR1-201ENST00000301364 ZSCAN26Q16670 478 aa21.44■■□□□ 1.02
TSR1-201ENST00000301364 KIF2CQ99661 725 aa21.44■■□□□ 1.02
TSR1-201ENST00000301364 INPP5BP32019 993 aa21.44■■□□□ 1.02
TSR1-201ENST00000301364 SARM1Q6SZW1 724 aa21.44■■□□□ 1.02
TSR1-201ENST00000301364 KCNK9Q9NPC2 374 aa21.44■■□□□ 1.02
TSR1-201ENST00000301364 SPTLC3Q9NUV7 552 aa21.44■■□□□ 1.02
TSR1-201ENST00000301364 ERBB3P21860 1342 aa21.44■■□□□ 1.02
TSR1-201ENST00000301364 OR52Z1P0C646 297 aa21.44■■□□□ 1.02
TSR1-201ENST00000301364 IFNAR1P17181 557 aa21.44■■□□□ 1.02
TSR1-201ENST00000301364 NCAPH2Q6IBW4 605 aa21.44■■□□□ 1.02
TSR1-201ENST00000301364 CEP57Q86XR8 500 aa21.44■■□□□ 1.02
TSR1-201ENST00000301364 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.44■■□□□ 1.02
TSR1-201ENST00000301364 CSRNP2Q9H175 543 aa21.44■■□□□ 1.02
TSR1-201ENST00000301364 CDC42BPBQ9Y5S2 1711 aa21.44■■□□□ 1.02
TSR1-201ENST00000301364 TCP1P17987 556 aaKnown RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms